RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 TNS1Q9HBL0 1735 aaKnown RBP24.01■■□□□ 1.43
SREBF1-213ENST00000485080 COL3A1P02461 1466 aaPredicted RBP24.01■■□□□ 1.43
SREBF1-213ENST00000485080 PPP2R1AP30153 589 aa24.01■■□□□ 1.43
SREBF1-213ENST00000485080 BCL11BQ9C0K0 894 aaPredicted RBP24.01■■□□□ 1.43
SREBF1-213ENST00000485080 SHANK3Q9BYB0 1731 aa24.01■■□□□ 1.43
SREBF1-213ENST00000485080 BAG6P46379 1132 aa24■■□□□ 1.43
SREBF1-213ENST00000485080 PKD1L3Q7Z443 1732 aa23.99■■□□□ 1.43
SREBF1-213ENST00000485080 ZNF316A6NFI3 1004 aaPredicted RBP23.99■■□□□ 1.43
SREBF1-213ENST00000485080 DIAPH1O60610 1272 aaKnown RBP23.99■■□□□ 1.43
SREBF1-213ENST00000485080 CNGB1Q14028 1251 aaPredicted RBP23.99■■□□□ 1.43
SREBF1-213ENST00000485080 DDX54Q8TDD1 881 aaKnown RBP23.99■■□□□ 1.43
SREBF1-213ENST00000485080 PCDH11XQ9BZA7 1347 aa23.98■■□□□ 1.43
SREBF1-213ENST00000485080 PCDH11YQ9BZA8 1340 aa23.98■■□□□ 1.43
SREBF1-213ENST00000485080 RALBP1Q15311 655 aa23.97■■□□□ 1.43
SREBF1-213ENST00000485080 DEFB132Q7Z7B7 95 aa23.97■■□□□ 1.43
SREBF1-213ENST00000485080 SPG7Q9UQ90 795 aa23.96■■□□□ 1.43
SREBF1-213ENST00000485080 CFAP53Q96M91 514 aa23.95■■□□□ 1.42
SREBF1-213ENST00000485080 CYP27B1O15528 508 aa23.94■■□□□ 1.42
SREBF1-213ENST00000485080 APBA3O96018 575 aa23.94■■□□□ 1.42
SREBF1-213ENST00000485080 SULT6B1Q6IMI4 303 aa23.94■■□□□ 1.42
SREBF1-213ENST00000485080 NHSQ6T4R5 1651 aa23.94■■□□□ 1.42
SREBF1-213ENST00000485080 PLSCR1O15162 318 aa23.93■■□□□ 1.42
SREBF1-213ENST00000485080 NKX1-1Q15270 411 aaPredicted RBP23.93■■□□□ 1.42
SREBF1-213ENST00000485080 AEBP1Q8IUX7 1158 aa23.93■■□□□ 1.42
SREBF1-213ENST00000485080 CAMKK2Q96RR4 588 aa23.93■■□□□ 1.42
SREBF1-213ENST00000485080 AMOTQ4VCS5 1084 aa23.92■■□□□ 1.42
SREBF1-213ENST00000485080 EN1Q05925 392 aaPredicted RBP23.91■■□□□ 1.42
SREBF1-213ENST00000485080 PTF1AQ7RTS3 328 aa23.91■■□□□ 1.42
SREBF1-213ENST00000485080 KAT6BQ8WYB5 2073 aa23.91■■□□□ 1.42
SREBF1-213ENST00000485080 RGPD3A6NKT7 1758 aaPredicted RBP23.91■■□□□ 1.42
SREBF1-213ENST00000485080 RGPD4Q7Z3J3 1758 aa23.91■■□□□ 1.42
SREBF1-213ENST00000485080 KCNQ2O43526 872 aa23.9■■□□□ 1.42
SREBF1-213ENST00000485080 PLEKHO1Q53GL0 409 aaPredicted RBP23.9■■□□□ 1.42
SREBF1-213ENST00000485080 IFNL2Q8IZJ0 200 aa23.89■■□□□ 1.41
SREBF1-213ENST00000485080 ACSBG1Q96GR2 724 aa23.88■■□□□ 1.41
SREBF1-213ENST00000485080 NUDCQ9Y266 331 aa23.88■■□□□ 1.41
SREBF1-213ENST00000485080 PHKG2P15735 406 aa23.87■■□□□ 1.41
SREBF1-213ENST00000485080 PRIM1P49642 420 aaKnown RBP23.85■■□□□ 1.41
SREBF1-213ENST00000485080 EZH2Q15910 746 aaKnown RBP23.85■■□□□ 1.41
SREBF1-213ENST00000485080 MYBBP1AQ9BQG0 1328 aaKnown RBP23.84■■□□□ 1.41
SREBF1-213ENST00000485080 HSP90AB1P08238 724 aaKnown RBP23.84■■□□□ 1.41
SREBF1-213ENST00000485080 HMOX1P09601 288 aa23.84■■□□□ 1.41
SREBF1-213ENST00000485080 PRKRIP1Q9H875 184 aaPredicted RBP23.84■■□□□ 1.41
SREBF1-213ENST00000485080 DOT1LQ8TEK3 1739 aa23.84■■□□□ 1.41
SREBF1-213ENST00000485080 BTAF1O14981 1849 aa23.83■■□□□ 1.41
SREBF1-213ENST00000485080 U2SURPO15042 1029 aaKnown RBP23.83■■□□□ 1.41
SREBF1-213ENST00000485080 RREB1Q92766 1687 aa23.83■■□□□ 1.4
SREBF1-213ENST00000485080 ZNF530Q6P9A1 599 aaPredicted RBP23.81■■□□□ 1.4
SREBF1-213ENST00000485080 PROM2Q8N271 834 aa23.8■■□□□ 1.4
SREBF1-213ENST00000485080 DCAF5Q96JK2 942 aa23.8■■□□□ 1.4
SREBF1-213ENST00000485080 TOGARAM1Q9Y4F4 1720 aa23.79■■□□□ 1.4
SREBF1-213ENST00000485080 FCHSD2O94868 740 aa23.79■■□□□ 1.4
SREBF1-213ENST00000485080 RSPH6AQ9H0K4 717 aa23.79■■□□□ 1.4
SREBF1-213ENST00000485080 ERVV-2B6SEH9 535 aa23.78■■□□□ 1.4
SREBF1-213ENST00000485080 SYTL4Q96C24 671 aaPredicted RBP23.78■■□□□ 1.4
SREBF1-213ENST00000485080 U2AF1L5P0DN76 240 aaPredicted RBP23.77■■□□□ 1.4
SREBF1-213ENST00000485080 U2AF1Q01081 240 aaKnown RBP eCLIP23.77■■□□□ 1.4
SREBF1-213ENST00000485080 AKAP4Q5JQC9 854 aa23.77■■□□□ 1.4
SREBF1-213ENST00000485080 C1orf141Q5JVX7 400 aa23.77■■□□□ 1.4
SREBF1-213ENST00000485080 ITGB4P16144 1822 aa23.76■■□□□ 1.39
SREBF1-213ENST00000485080 TXNRD1Q16881 649 aa23.76■■□□□ 1.39
SREBF1-213ENST00000485080 NUP188Q5SRE5 1749 aa23.76■■□□□ 1.39
SREBF1-213ENST00000485080 MTHFSDQ2M296 383 aaKnown RBP23.75■■□□□ 1.39
SREBF1-213ENST00000485080 KDM6AO15550 1401 aaPredicted RBP23.75■■□□□ 1.39
SREBF1-213ENST00000485080 SLC27A3Q5K4L6 730 aa23.74■■□□□ 1.39
SREBF1-213ENST00000485080 PIGBQ92521 554 aa23.74■■□□□ 1.39
SREBF1-213ENST00000485080 PRKAR2BP31323 418 aa23.73■■□□□ 1.39
SREBF1-213ENST00000485080 MPRIPQ6WCQ1 1025 aa23.73■■□□□ 1.39
SREBF1-213ENST00000485080 GAS2L2Q8NHY3 880 aa23.73■■□□□ 1.39
SREBF1-213ENST00000485080 SRCAPQ6ZRS2 3230 aa23.72■■□□□ 1.39
SREBF1-213ENST00000485080 TMOD3Q9NYL9 352 aa23.72■■□□□ 1.39
SREBF1-213ENST00000485080 LY75O60449 1722 aa23.71■■□□□ 1.39
SREBF1-213ENST00000485080 NBPF14Q5TI25 921 aa23.71■■□□□ 1.39
SREBF1-213ENST00000485080 SMARCC1Q92922 1105 aaPredicted RBP23.71■■□□□ 1.39
SREBF1-213ENST00000485080 PHACTR3Q96KR7 559 aa23.7■■□□□ 1.38
SREBF1-213ENST00000485080 ADAMTS7Q9UKP4 1686 aa23.7■■□□□ 1.38
SREBF1-213ENST00000485080 HMGB2P26583 209 aaKnown RBP23.69■■□□□ 1.38
SREBF1-213ENST00000485080 SCN11AQ9UI33 1791 aa23.68■■□□□ 1.38
SREBF1-213ENST00000485080 PNNQ9H307 717 aaKnown RBP23.68■■□□□ 1.38
SREBF1-213ENST00000485080 PLEKHF1Q96S99 279 aa23.67■■□□□ 1.38
SREBF1-213ENST00000485080 LRRC4BQ9NT99 713 aa23.67■■□□□ 1.38
SREBF1-213ENST00000485080 PALLDQ8WX93 1383 aa23.66■■□□□ 1.38
SREBF1-213ENST00000485080 GNAT3A8MTJ3 354 aa23.66■■□□□ 1.38
SREBF1-213ENST00000485080 RNMTO43148 476 aaKnown RBP23.66■■□□□ 1.38
SREBF1-213ENST00000485080 CABP4P57796 275 aa23.66■■□□□ 1.38
SREBF1-213ENST00000485080 MRC1P22897 1456 aa23.66■■□□□ 1.38
SREBF1-213ENST00000485080 PAPPAQ13219 1627 aa23.66■■□□□ 1.38
SREBF1-213ENST00000485080 MAP3K5Q99683 1374 aa23.65■■□□□ 1.38
SREBF1-213ENST00000485080 SLC52A2Q9HAB3 445 aa23.64■■□□□ 1.37
SREBF1-213ENST00000485080 LGR6Q9HBX8 967 aa23.64■■□□□ 1.37
SREBF1-213ENST00000485080 ANO8Q9HCE9 1232 aaPredicted RBP23.64■■□□□ 1.37
SREBF1-213ENST00000485080 ATG3Q9NT62 314 aa23.64■■□□□ 1.37
SREBF1-213ENST00000485080 ANP32CO43423 234 aa23.63■■□□□ 1.37
SREBF1-213ENST00000485080 R3HDM1Q15032 1099 aaKnown RBP23.63■■□□□ 1.37
SREBF1-213ENST00000485080 NFATC2IPQ8NCF5 419 aa23.63■■□□□ 1.37
SREBF1-213ENST00000485080 ASAP1Q9ULH1 1129 aa23.63■■□□□ 1.37
SREBF1-213ENST00000485080 HTATSF1O43719 755 aaKnown RBP23.62■■□□□ 1.37
SREBF1-213ENST00000485080 CCNL1Q9UK58 526 aaPredicted RBP23.62■■□□□ 1.37
SREBF1-213ENST00000485080 CEMIPQ8WUJ3 1361 aa23.62■■□□□ 1.37
SREBF1-213ENST00000485080 NEFMP07197 916 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms