RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 VAMP4O75379 141 aa21.44■■□□□ 1.02
CTSA-207ENST00000484855 MS4A1P11836 297 aa21.44■■□□□ 1.02
CTSA-207ENST00000484855 TSPYL6Q8N831 410 aa21.44■■□□□ 1.02
CTSA-207ENST00000484855 ANKRD24Q8TF21 1146 aa21.44■■□□□ 1.02
CTSA-207ENST00000484855 HTATSF1O43719 755 aaKnown RBP21.43■■□□□ 1.02
CTSA-207ENST00000484855 ZC3H6P61129 1189 aaKnown RBP21.43■■□□□ 1.02
CTSA-207ENST00000484855 TWISTNBQ3B726 338 aaPredicted RBP21.43■■□□□ 1.02
CTSA-207ENST00000484855 FTSJ3Q8IY81 847 aaKnown RBP21.43■■□□□ 1.02
CTSA-207ENST00000484855 LRRC59Q96AG4 307 aaKnown RBP21.43■■□□□ 1.02
CTSA-207ENST00000484855 CLUAP1Q96AJ1 413 aa21.43■■□□□ 1.02
CTSA-207ENST00000484855 NCAPD2Q15021 1401 aa21.43■■□□□ 1.02
CTSA-207ENST00000484855 COL18A1P39060 1754 aa21.43■■□□□ 1.02
CTSA-207ENST00000484855 MAP3K5Q99683 1374 aa21.43■■□□□ 1.02
CTSA-207ENST00000484855 CHL1O00533 1208 aa21.43■■□□□ 1.02
CTSA-207ENST00000484855 GNAT3A8MTJ3 354 aa21.42■■□□□ 1.02
CTSA-207ENST00000484855 DZIP1LQ8IYY4 767 aaKnown RBP21.41■■□□□ 1.02
CTSA-207ENST00000484855 C8orf58Q8NAV2 365 aa21.41■■□□□ 1.02
CTSA-207ENST00000484855 NOB1Q9ULX3 412 aaKnown RBP21.41■■□□□ 1.02
CTSA-207ENST00000484855 ELL2O00472 640 aaPredicted RBP21.41■■□□□ 1.02
CTSA-207ENST00000484855 ATF7IPQ6VMQ6 1270 aa21.41■■□□□ 1.02
CTSA-207ENST00000484855 AXIN2Q9Y2T1 843 aa21.41■■□□□ 1.02
CTSA-207ENST00000484855 ABCC6O95255 1503 aa21.41■■□□□ 1.02
CTSA-207ENST00000484855 TRIM27P14373 513 aa21.4■■□□□ 1.02
CTSA-207ENST00000484855 KDM2BQ8NHM5 1336 aa21.4■■□□□ 1.02
CTSA-207ENST00000484855 NHSL1Q5SYE7 1610 aa21.4■■□□□ 1.02
CTSA-207ENST00000484855 LMO7Q8WWI1 1683 aa21.4■■□□□ 1.02
CTSA-207ENST00000484855 IPO8O15397 1037 aaKnown RBP21.4■■□□□ 1.02
CTSA-207ENST00000484855 BRPF1P55201 1214 aaPredicted RBP21.4■■□□□ 1.02
CTSA-207ENST00000484855 FAM208AQ9UK61 1670 aaKnown RBP21.4■■□□□ 1.02
CTSA-207ENST00000484855 VIRMAQ69YN4 1812 aaKnown RBP21.39■■□□□ 1.02
CTSA-207ENST00000484855 AAMPQ13685 434 aa21.39■■□□□ 1.01
CTSA-207ENST00000484855 CENPQQ7L2Z9 268 aaPredicted RBP21.39■■□□□ 1.01
CTSA-207ENST00000484855 CABLES1Q8TDN4 633 aa21.39■■□□□ 1.01
CTSA-207ENST00000484855 MVPQ14764 893 aaKnown RBP21.38■■□□□ 1.01
CTSA-207ENST00000484855 ERBB3P21860 1342 aa21.38■■□□□ 1.01
CTSA-207ENST00000484855 KIAA0232Q92628 1395 aa21.38■■□□□ 1.01
CTSA-207ENST00000484855 SOS2Q07890 1332 aaPredicted RBP21.37■■□□□ 1.01
CTSA-207ENST00000484855 MRPL50Q8N5N7 158 aaKnown RBP21.37■■□□□ 1.01
CTSA-207ENST00000484855 TSPYL4Q9UJ04 414 aa21.37■■□□□ 1.01
CTSA-207ENST00000484855 ABCA3Q99758 1704 aa21.37■■□□□ 1.01
CTSA-207ENST00000484855 HAP1P54257 671 aaPredicted RBP21.36■■□□□ 1.01
CTSA-207ENST00000484855 MIS18AQ9NYP9 233 aa21.34■■□□□ 1.01
CTSA-207ENST00000484855 CPDO75976 1380 aa21.34■■□□□ 1.01
CTSA-207ENST00000484855 KRT24Q2M2I5 525 aa21.34■■□□□ 1.01
CTSA-207ENST00000484855 PLEKHO1Q53GL0 409 aaPredicted RBP21.34■■□□□ 1.01
CTSA-207ENST00000484855 IL17REQ8NFR9 667 aa21.33■■□□□ 1.01
CTSA-207ENST00000484855 TCERG1O14776 1098 aaKnown RBP21.33■■□□□ 1
CTSA-207ENST00000484855 AMOTQ4VCS5 1084 aa21.33■■□□□ 1
CTSA-207ENST00000484855 ITPRIPQ8IWB1 547 aa21.33■■□□□ 1
CTSA-207ENST00000484855 ZNF530Q6P9A1 599 aaPredicted RBP21.31■■□□□ 1
CTSA-207ENST00000484855 ARHGAP45Q92619 1136 aa21.31■■□□□ 1
CTSA-207ENST00000484855 DDX19BQ9UMR2 479 aa21.31■■□□□ 1
CTSA-207ENST00000484855 CHRNA2Q15822 529 aa21.31■■□□□ 1
CTSA-207ENST00000484855 TMEM57Q8N5G2 664 aa21.31■■□□□ 1
CTSA-207ENST00000484855 AKAP4Q5JQC9 854 aa21.3■■□□□ 1
CTSA-207ENST00000484855 CEMIPQ8WUJ3 1361 aa21.3■■□□□ 1
CTSA-207ENST00000484855 BABAM1Q9NWV8 329 aa21.29■■□□□ 1
CTSA-207ENST00000484855 NLRP2Q9NX02 1062 aa21.29■■□□□ 1
CTSA-207ENST00000484855 RBM19Q9Y4C8 960 aaKnown RBP21.29■■□□□ 1
CTSA-207ENST00000484855 KDM3BQ7LBC6 1761 aa21.29■■□□□ 1
CTSA-207ENST00000484855 TAF7Q15545 349 aaPredicted RBP21.29■■□□□ 1
CTSA-207ENST00000484855 CSB-PGBD3P0DP91 1061 aa21.28■■□□□ 1
CTSA-207ENST00000484855 IGHDP01880 384 aa21.27■■□□□ 1
CTSA-207ENST00000484855 C1orf141Q5JVX7 400 aa21.27■■□□□ 1
CTSA-207ENST00000484855 PCDHB15Q9Y5E8 787 aa21.27■■□□□ 1
CTSA-207ENST00000484855 ROBO1Q9Y6N7 1651 aa21.27■■□□□ 1
CTSA-207ENST00000484855 API5Q9BZZ5 524 aaKnown RBP21.26■□□□□ 0.99
CTSA-207ENST00000484855 RAPGEF4Q8WZA2 1011 aa21.26■□□□□ 0.99
CTSA-207ENST00000484855 ABCC4O15439 1325 aa21.25■□□□□ 0.99
CTSA-207ENST00000484855 LTBP4Q8N2S1 1624 aa21.25■□□□□ 0.99
CTSA-207ENST00000484855 CACNA1FO60840 1977 aa21.25■□□□□ 0.99
CTSA-207ENST00000484855 OVOS2A0A0G2JMS6 1433 aa21.25■□□□□ 0.99
CTSA-207ENST00000484855 LGR6Q9HBX8 967 aa21.25■□□□□ 0.99
CTSA-207ENST00000484855 ADAMTS7Q9UKP4 1686 aa21.24■□□□□ 0.99
CTSA-207ENST00000484855 PRDM11Q9NQV5 511 aa21.24■□□□□ 0.99
CTSA-207ENST00000484855 SIPA1L3O60292 1781 aaPredicted RBP21.24■□□□□ 0.99
CTSA-207ENST00000484855 SKAP1Q86WV1 359 aa21.24■□□□□ 0.99
CTSA-207ENST00000484855 MEGF6O75095 1541 aa21.24■□□□□ 0.99
CTSA-207ENST00000484855 PKD1L3Q7Z443 1732 aa21.23■□□□□ 0.99
CTSA-207ENST00000484855 TATP17735 454 aaPredicted RBP21.23■□□□□ 0.99
CTSA-207ENST00000484855 MPRIPQ6WCQ1 1025 aa21.23■□□□□ 0.99
CTSA-207ENST00000484855 SCN11AQ9UI33 1791 aa21.22■□□□□ 0.99
CTSA-207ENST00000484855 TEFQ10587 303 aa21.22■□□□□ 0.99
CTSA-207ENST00000484855 SOS1Q07889 1333 aaPredicted RBP21.22■□□□□ 0.99
CTSA-207ENST00000484855 PLEKHG2Q9H7P9 1386 aa21.21■□□□□ 0.99
CTSA-207ENST00000484855 RNMTO43148 476 aaKnown RBP21.21■□□□□ 0.99
CTSA-207ENST00000484855 RWDD1Q9H446 243 aaPredicted RBP21.21■□□□□ 0.99
CTSA-207ENST00000484855 PARP4Q9UKK3 1724 aaKnown RBP21.2■□□□□ 0.99
CTSA-207ENST00000484855 PTPRCP08575 1304 aa21.2■□□□□ 0.98
CTSA-207ENST00000484855 ZBTB40Q9NUA8 1239 aa21.2■□□□□ 0.98
CTSA-207ENST00000484855 AHDC1Q5TGY3 1603 aaPredicted RBP21.2■□□□□ 0.98
CTSA-207ENST00000484855 CHMP4BQ9H444 224 aaKnown RBP21.2■□□□□ 0.98
CTSA-207ENST00000484855 RGS12O14924 1447 aa21.2■□□□□ 0.98
CTSA-207ENST00000484855 SLC4A2P04920 1241 aa21.19■□□□□ 0.98
CTSA-207ENST00000484855 COL5A2P05997 1499 aaPredicted RBP21.19■□□□□ 0.98
CTSA-207ENST00000484855 STK31Q9BXU1 1019 aa21.18■□□□□ 0.98
CTSA-207ENST00000484855 SPG7Q9UQ90 795 aa21.18■□□□□ 0.98
CTSA-207ENST00000484855 WDR17Q8IZU2 1322 aa21.18■□□□□ 0.98
CTSA-207ENST00000484855 CCDC30Q5VVM6 783 aa21.17■□□□□ 0.98
CTSA-207ENST00000484855 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms