RNA–Protein interactions for RNA: ENST00000484704.5

HLA-F-226, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-226ENST00000484704 SYT17Q9BSW7 474 aa20.59■□□□□ 0.89
HLA-F-226ENST00000484704 FLT4P35916 1363 aa20.59■□□□□ 0.89
HLA-F-226ENST00000484704 KIF7Q2M1P5 1343 aa20.57■□□□□ 0.88
HLA-F-226ENST00000484704 TNS2Q63HR2 1409 aa20.57■□□□□ 0.88
HLA-F-226ENST00000484704 SGIP1Q9BQI5 828 aa20.57■□□□□ 0.88
HLA-F-226ENST00000484704 EMILIN1Q9Y6C2 1016 aa20.57■□□□□ 0.88
HLA-F-226ENST00000484704 KIF24Q5T7B8 1368 aa20.57■□□□□ 0.88
HLA-F-226ENST00000484704 HSP90AB2PQ58FF8 381 aa20.55■□□□□ 0.88
HLA-F-226ENST00000484704 MTFR1LQ9H019 292 aa20.55■□□□□ 0.88
HLA-F-226ENST00000484704 INSRP06213 1382 aa20.55■□□□□ 0.88
HLA-F-226ENST00000484704 MORC1Q86VD1 984 aa20.54■□□□□ 0.88
HLA-F-226ENST00000484704 USHBP1Q8N6Y0 703 aa20.54■□□□□ 0.88
HLA-F-226ENST00000484704 ZNF784Q8NCA9 323 aaPredicted RBP20.54■□□□□ 0.88
HLA-F-226ENST00000484704 ANKRD26Q9UPS8 1709 aa20.53■□□□□ 0.88
HLA-F-226ENST00000484704 DDX54Q8TDD1 881 aaKnown RBP20.53■□□□□ 0.88
HLA-F-226ENST00000484704 RAPGEF4Q8WZA2 1011 aa20.53■□□□□ 0.88
HLA-F-226ENST00000484704 NSD2O96028 1365 aa20.53■□□□□ 0.88
HLA-F-226ENST00000484704 NBPF6Q5VWK0 638 aa20.52■□□□□ 0.88
HLA-F-226ENST00000484704 NBPF4Q96M43 638 aa20.52■□□□□ 0.88
HLA-F-226ENST00000484704 LRRC4BQ9NT99 713 aa20.52■□□□□ 0.88
HLA-F-226ENST00000484704 MAP2P11137 1827 aaKnown RBP20.52■□□□□ 0.88
HLA-F-226ENST00000484704 RGPD2P0DJD1 1756 aa20.51■□□□□ 0.87
HLA-F-226ENST00000484704 TATP17735 454 aaPredicted RBP20.51■□□□□ 0.87
HLA-F-226ENST00000484704 ZNF827Q17R98 1081 aa20.51■□□□□ 0.87
HLA-F-226ENST00000484704 KAT6BQ8WYB5 2073 aa20.5■□□□□ 0.87
HLA-F-226ENST00000484704 ARXQ96QS3 562 aa20.5■□□□□ 0.87
HLA-F-226ENST00000484704 POLKQ9UBT6 870 aa20.5■□□□□ 0.87
HLA-F-226ENST00000484704 WASHC2AQ641Q2 1341 aa20.49■□□□□ 0.87
HLA-F-226ENST00000484704 ZCRB1Q8TBF4 217 aaKnown RBP20.48■□□□□ 0.87
HLA-F-226ENST00000484704 KCNQ4P56696 695 aa20.46■□□□□ 0.87
HLA-F-226ENST00000484704 CNGB1Q14028 1251 aaPredicted RBP20.46■□□□□ 0.87
HLA-F-226ENST00000484704 NHSQ6T4R5 1651 aa20.45■□□□□ 0.86
HLA-F-226ENST00000484704 UTRNP46939 3433 aa20.45■□□□□ 0.86
HLA-F-226ENST00000484704 MEGF6O75095 1541 aa20.44■□□□□ 0.86
HLA-F-226ENST00000484704 AKT1S1Q96B36 256 aa20.44■□□□□ 0.86
HLA-F-226ENST00000484704 SYTL4Q96C24 671 aaPredicted RBP20.44■□□□□ 0.86
HLA-F-226ENST00000484704 CC2D1BQ5T0F9 858 aaKnown RBP20.43■□□□□ 0.86
HLA-F-226ENST00000484704 PAPPAQ13219 1627 aa20.42■□□□□ 0.86
HLA-F-226ENST00000484704 AMER1Q5JTC6 1135 aaPredicted RBP20.41■□□□□ 0.86
HLA-F-226ENST00000484704 EYA1Q99502 592 aa20.41■□□□□ 0.86
HLA-F-226ENST00000484704 BTAF1O14981 1849 aa20.4■□□□□ 0.86
HLA-F-226ENST00000484704 PRIM1P49642 420 aaKnown RBP20.4■□□□□ 0.86
HLA-F-226ENST00000484704 EIF4A2Q14240 407 aaKnown RBP20.4■□□□□ 0.86
HLA-F-226ENST00000484704 GPR162Q16538 588 aa20.4■□□□□ 0.86
HLA-F-226ENST00000484704 KLHL34Q8N239 644 aa20.4■□□□□ 0.86
HLA-F-226ENST00000484704 PCDH11XQ9BZA7 1347 aa20.4■□□□□ 0.86
HLA-F-226ENST00000484704 PCDH11YQ9BZA8 1340 aa20.4■□□□□ 0.86
HLA-F-226ENST00000484704 PNPLA7Q6ZV29 1317 aa20.39■□□□□ 0.85
HLA-F-226ENST00000484704 SPG7Q9UQ90 795 aa20.39■□□□□ 0.85
HLA-F-226ENST00000484704 MAP3K5Q99683 1374 aa20.37■□□□□ 0.85
HLA-F-226ENST00000484704 SLC27A3Q5K4L6 730 aa20.37■□□□□ 0.85
HLA-F-226ENST00000484704 TFCP2L1Q9NZI6 479 aa20.37■□□□□ 0.85
HLA-F-226ENST00000484704 PER1O15534 1290 aaPredicted RBP20.36■□□□□ 0.85
HLA-F-226ENST00000484704 C1QTNF8P60827 252 aa20.36■□□□□ 0.85
HLA-F-226ENST00000484704 PELP1Q8IZL8 1130 aaKnown RBP20.36■□□□□ 0.85
HLA-F-226ENST00000484704 SENP3-EIF4A1A0A087X0R7 540 aa20.35■□□□□ 0.85
HLA-F-226ENST00000484704 SLC16A10Q8TF71 515 aa20.35■□□□□ 0.85
HLA-F-226ENST00000484704 DOT1LQ8TEK3 1739 aa20.34■□□□□ 0.85
HLA-F-226ENST00000484704 NLGN2Q8NFZ4 835 aa20.34■□□□□ 0.85
HLA-F-226ENST00000484704 SHANK3Q9BYB0 1731 aa20.33■□□□□ 0.85
HLA-F-226ENST00000484704 POLD1P28340 1107 aa20.33■□□□□ 0.85
HLA-F-226ENST00000484704 MTHFSP49914 203 aa20.32■□□□□ 0.84
HLA-F-226ENST00000484704 IGSF1Q8N6C5 1336 aa20.31■□□□□ 0.84
HLA-F-226ENST00000484704 NCAPD2Q15021 1401 aa20.31■□□□□ 0.84
HLA-F-226ENST00000484704 CYP27B1O15528 508 aa20.3■□□□□ 0.84
HLA-F-226ENST00000484704 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.3■□□□□ 0.84
HLA-F-226ENST00000484704 NPC1L1Q9UHC9 1359 aa20.3■□□□□ 0.84
HLA-F-226ENST00000484704 PLEKHO1Q53GL0 409 aaPredicted RBP20.29■□□□□ 0.84
HLA-F-226ENST00000484704 COL23A1Q86Y22 540 aaPredicted RBP20.29■□□□□ 0.84
HLA-F-226ENST00000484704 IFNL2Q8IZJ0 200 aa20.29■□□□□ 0.84
HLA-F-226ENST00000484704 CCNL1Q9UK58 526 aaPredicted RBP20.29■□□□□ 0.84
HLA-F-226ENST00000484704 CHD4Q14839 1912 aa20.29■□□□□ 0.84
HLA-F-226ENST00000484704 PKD1L3Q7Z443 1732 aa20.28■□□□□ 0.84
HLA-F-226ENST00000484704 MSH5O43196 834 aa20.28■□□□□ 0.84
HLA-F-226ENST00000484704 SULT6B1Q6IMI4 303 aa20.28■□□□□ 0.84
HLA-F-226ENST00000484704 MPRIPQ6WCQ1 1025 aa20.28■□□□□ 0.84
HLA-F-226ENST00000484704 YBX3P16989 372 aaKnown RBP eCLIP20.27■□□□□ 0.84
HLA-F-226ENST00000484704 DIAPH1O60610 1272 aaKnown RBP20.26■□□□□ 0.83
HLA-F-226ENST00000484704 IL13P35225 146 aa20.26■□□□□ 0.83
HLA-F-226ENST00000484704 MSL1Q68DK7 614 aa20.26■□□□□ 0.83
HLA-F-226ENST00000484704 PHKG2P15735 406 aa20.25■□□□□ 0.83
HLA-F-226ENST00000484704 AMOTQ4VCS5 1084 aa20.25■□□□□ 0.83
HLA-F-226ENST00000484704 C1orf141Q5JVX7 400 aa20.24■□□□□ 0.83
HLA-F-226ENST00000484704 ZNF530Q6P9A1 599 aaPredicted RBP20.24■□□□□ 0.83
HLA-F-226ENST00000484704 AEBP1Q8IUX7 1158 aa20.24■□□□□ 0.83
HLA-F-226ENST00000484704 CFAP53Q96M91 514 aa20.24■□□□□ 0.83
HLA-F-226ENST00000484704 TMOD3Q9NYL9 352 aa20.24■□□□□ 0.83
HLA-F-226ENST00000484704 PLEKHG2Q9H7P9 1386 aa20.23■□□□□ 0.83
HLA-F-226ENST00000484704 GIGYF1O75420 1035 aaPredicted RBP20.23■□□□□ 0.83
HLA-F-226ENST00000484704 HSP90AB1P08238 724 aaKnown RBP20.23■□□□□ 0.83
HLA-F-226ENST00000484704 U2SURPO15042 1029 aaKnown RBP20.22■□□□□ 0.83
HLA-F-226ENST00000484704 NKX1-1Q15270 411 aaPredicted RBP20.22■□□□□ 0.83
HLA-F-226ENST00000484704 TUBGCP6Q96RT7 1819 aa20.22■□□□□ 0.83
HLA-F-226ENST00000484704 HMOX1P09601 288 aa20.21■□□□□ 0.83
HLA-F-226ENST00000484704 SMARCC1Q92922 1105 aaPredicted RBP20.21■□□□□ 0.83
HLA-F-226ENST00000484704 GOLGB1Q14789 3259 aaKnown RBP20.21■□□□□ 0.83
HLA-F-226ENST00000484704 COL24A1Q17RW2 1714 aa20.21■□□□□ 0.83
HLA-F-226ENST00000484704 QSER1Q2KHR3 1735 aa20.21■□□□□ 0.83
HLA-F-226ENST00000484704 HMGB2P26583 209 aaKnown RBP20.2■□□□□ 0.82
HLA-F-226ENST00000484704 PALLDQ8WX93 1383 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms