RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 RUNDC1Q96C34 613 aa18.73■□□□□ 0.59
SRSF6-202ENST00000483871 A0A0G2JS52 829 aa18.73■□□□□ 0.59
SRSF6-202ENST00000483871 MYT1Q01538 1121 aa18.73■□□□□ 0.59
SRSF6-202ENST00000483871 MTHFSDQ2M296 383 aaKnown RBP18.73■□□□□ 0.59
SRSF6-202ENST00000483871 PNNQ9H307 717 aaKnown RBP18.73■□□□□ 0.59
SRSF6-202ENST00000483871 RXRBP28702 533 aa18.72■□□□□ 0.59
SRSF6-202ENST00000483871 APAF1O14727 1248 aa18.71■□□□□ 0.59
SRSF6-202ENST00000483871 ONECUT3O60422 494 aaPredicted RBP18.71■□□□□ 0.59
SRSF6-202ENST00000483871 EXOC5O00471 708 aa18.7■□□□□ 0.58
SRSF6-202ENST00000483871 PLEKHO1Q53GL0 409 aaPredicted RBP18.7■□□□□ 0.58
SRSF6-202ENST00000483871 ZCRB1Q8TBF4 217 aaKnown RBP18.7■□□□□ 0.58
SRSF6-202ENST00000483871 RRP7AQ9Y3A4 280 aaKnown RBP18.7■□□□□ 0.58
SRSF6-202ENST00000483871 OVOS2A0A0G2JMS6 1433 aa18.7■□□□□ 0.58
SRSF6-202ENST00000483871 MAPK8IP3Q9UPT6 1336 aa18.7■□□□□ 0.58
SRSF6-202ENST00000483871 NEFMP07197 916 aa18.69■□□□□ 0.58
SRSF6-202ENST00000483871 NEUROD2Q15784 382 aa18.69■□□□□ 0.58
SRSF6-202ENST00000483871 SEPT12Q8IYM1 358 aa18.69■□□□□ 0.58
SRSF6-202ENST00000483871 CDCA7Q9BWT1 371 aaPredicted RBP18.69■□□□□ 0.58
SRSF6-202ENST00000483871 DDB1Q16531 1140 aa18.69■□□□□ 0.58
SRSF6-202ENST00000483871 DDX54Q8TDD1 881 aaKnown RBP18.69■□□□□ 0.58
SRSF6-202ENST00000483871 WNK3Q9BYP7 1800 aa18.68■□□□□ 0.58
SRSF6-202ENST00000483871 AMOTQ4VCS5 1084 aa18.68■□□□□ 0.58
SRSF6-202ENST00000483871 SPG7Q9UQ90 795 aa18.68■□□□□ 0.58
SRSF6-202ENST00000483871 SALL2Q9Y467 1007 aaPredicted RBP18.68■□□□□ 0.58
SRSF6-202ENST00000483871 CYP27B1O15528 508 aa18.67■□□□□ 0.58
SRSF6-202ENST00000483871 TMPOP42166 694 aaKnown RBP18.67■□□□□ 0.58
SRSF6-202ENST00000483871 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.67■□□□□ 0.581e-19■□□□□ 10.9
SRSF6-202ENST00000483871 PARP4Q9UKK3 1724 aaKnown RBP18.67■□□□□ 0.58
SRSF6-202ENST00000483871 ZNF530Q6P9A1 599 aaPredicted RBP18.66■□□□□ 0.58
SRSF6-202ENST00000483871 GAS2L2Q8NHY3 880 aa18.66■□□□□ 0.58
SRSF6-202ENST00000483871 RIPK4P57078 832 aa18.65■□□□□ 0.58
SRSF6-202ENST00000483871 NFE2L2Q16236 605 aa18.65■□□□□ 0.58
SRSF6-202ENST00000483871 THSD7AQ9UPZ6 1657 aa18.65■□□□□ 0.58
SRSF6-202ENST00000483871 PHKG2P15735 406 aa18.64■□□□□ 0.57
SRSF6-202ENST00000483871 FAM182BQ5T319 152 aa18.64■□□□□ 0.57
SRSF6-202ENST00000483871 PKD1L3Q7Z443 1732 aa18.64■□□□□ 0.57
SRSF6-202ENST00000483871 LRRC37A3O60309 1634 aa18.63■□□□□ 0.57
SRSF6-202ENST00000483871 IFNL2Q8IZJ0 200 aa18.63■□□□□ 0.57
SRSF6-202ENST00000483871 MARCH10Q8NA82 808 aaPredicted RBP18.63■□□□□ 0.57
SRSF6-202ENST00000483871 SHANK3Q9BYB0 1731 aa18.63■□□□□ 0.57
SRSF6-202ENST00000483871 TNS2Q63HR2 1409 aa18.63■□□□□ 0.57
SRSF6-202ENST00000483871 PCDH11XQ9BZA7 1347 aa18.63■□□□□ 0.57
SRSF6-202ENST00000483871 PCDH11YQ9BZA8 1340 aa18.63■□□□□ 0.57
SRSF6-202ENST00000483871 PDE3BQ13370 1112 aa18.63■□□□□ 0.57
SRSF6-202ENST00000483871 DCTN1Q14203 1278 aa18.63■□□□□ 0.57
SRSF6-202ENST00000483871 AKAP4Q5JQC9 854 aa18.63■□□□□ 0.57
SRSF6-202ENST00000483871 C1orf141Q5JVX7 400 aa18.63■□□□□ 0.57
SRSF6-202ENST00000483871 MPRIPQ6WCQ1 1025 aa18.62■□□□□ 0.57
SRSF6-202ENST00000483871 RGS12O14924 1447 aa18.61■□□□□ 0.57
SRSF6-202ENST00000483871 GNAT3A8MTJ3 354 aa18.61■□□□□ 0.57
SRSF6-202ENST00000483871 HNRNPUQ00839 825 aaKnown RBP eCLIP18.61■□□□□ 0.573e-10■■□□□ 12.6
SRSF6-202ENST00000483871 LGR6Q9HBX8 967 aa18.61■□□□□ 0.57
SRSF6-202ENST00000483871 TRIM35Q9UPQ4 493 aa18.61■□□□□ 0.57
SRSF6-202ENST00000483871 DLG5Q8TDM6 1919 aa18.61■□□□□ 0.57
SRSF6-202ENST00000483871 PLEKHG2Q9H7P9 1386 aa18.61■□□□□ 0.57
SRSF6-202ENST00000483871 BRWD3Q6RI45 1802 aa18.6■□□□□ 0.57
SRSF6-202ENST00000483871 MCM10Q7L590 875 aa18.6■□□□□ 0.57
SRSF6-202ENST00000483871 IL17REQ8NFR9 667 aa18.6■□□□□ 0.57
SRSF6-202ENST00000483871 YTHDC1Q96MU7 727 aaKnown RBP18.6■□□□□ 0.57
SRSF6-202ENST00000483871 KRT27Q7Z3Y8 459 aa18.59■□□□□ 0.57
SRSF6-202ENST00000483871 THUMPD2Q9BTF0 503 aaKnown RBP18.59■□□□□ 0.57
SRSF6-202ENST00000483871 MAP3K5Q99683 1374 aa18.58■□□□□ 0.57
SRSF6-202ENST00000483871 NKX1-1Q15270 411 aaPredicted RBP18.57■□□□□ 0.56
SRSF6-202ENST00000483871 RTF1Q92541 710 aaKnown RBP18.57■□□□□ 0.56
SRSF6-202ENST00000483871 EP400Q96L91 3159 aa18.57■□□□□ 0.56
SRSF6-202ENST00000483871 RNMTO43148 476 aaKnown RBP18.57■□□□□ 0.56
SRSF6-202ENST00000483871 KAT6BQ8WYB5 2073 aa18.56■□□□□ 0.56
SRSF6-202ENST00000483871 WWC1Q8IX03 1113 aa18.56■□□□□ 0.56
SRSF6-202ENST00000483871 KDM6AO15550 1401 aaPredicted RBP18.55■□□□□ 0.56
SRSF6-202ENST00000483871 HTATSF1O43719 755 aaKnown RBP18.55■□□□□ 0.56
SRSF6-202ENST00000483871 HSP90AB1P08238 724 aaKnown RBP18.55■□□□□ 0.56
SRSF6-202ENST00000483871 ACSBG1Q96GR2 724 aa18.55■□□□□ 0.56
SRSF6-202ENST00000483871 DCAF5Q96JK2 942 aa18.55■□□□□ 0.56
SRSF6-202ENST00000483871 CCDC27Q2M243 656 aa18.54■□□□□ 0.56
SRSF6-202ENST00000483871 LMOD3Q0VAK6 560 aa18.53■□□□□ 0.56
SRSF6-202ENST00000483871 VIRMAQ69YN4 1812 aaKnown RBP18.52■□□□□ 0.55
SRSF6-202ENST00000483871 CEMIPQ8WUJ3 1361 aa18.51■□□□□ 0.55
SRSF6-202ENST00000483871 KCNQ2O43526 872 aa18.51■□□□□ 0.55
SRSF6-202ENST00000483871 PRIM1P49642 420 aaKnown RBP18.51■□□□□ 0.55
SRSF6-202ENST00000483871 NCBP3Q53F19 620 aaKnown RBP18.51■□□□□ 0.55
SRSF6-202ENST00000483871 NFATC2IPQ8NCF5 419 aa18.51■□□□□ 0.55
SRSF6-202ENST00000483871 SYTL4Q96C24 671 aaPredicted RBP18.51■□□□□ 0.55
SRSF6-202ENST00000483871 PTF1AQ7RTS3 328 aa18.5■□□□□ 0.55
SRSF6-202ENST00000483871 SCN11AQ9UI33 1791 aa18.5■□□□□ 0.55
SRSF6-202ENST00000483871 ZNF521Q96K83 1311 aa18.5■□□□□ 0.55
SRSF6-202ENST00000483871 CABP4P57796 275 aa18.5■□□□□ 0.55
SRSF6-202ENST00000483871 NGEFQ8N5V2 710 aa18.5■□□□□ 0.55
SRSF6-202ENST00000483871 SLC52A2Q9HAB3 445 aa18.5■□□□□ 0.55
SRSF6-202ENST00000483871 MIS18AQ9NYP9 233 aa18.5■□□□□ 0.55
SRSF6-202ENST00000483871 TOGARAM1Q9Y4F4 1720 aa18.49■□□□□ 0.55
SRSF6-202ENST00000483871 ERVV-2B6SEH9 535 aa18.49■□□□□ 0.55
SRSF6-202ENST00000483871 TEFQ10587 303 aa18.49■□□□□ 0.55
SRSF6-202ENST00000483871 FAM196AQ6ZSG2 479 aa18.49■□□□□ 0.55
SRSF6-202ENST00000483871 SPINK5Q9NQ38 1064 aaPredicted RBP18.49■□□□□ 0.55
SRSF6-202ENST00000483871 ADAMTS7Q9UKP4 1686 aa18.48■□□□□ 0.55
SRSF6-202ENST00000483871 LAS1LQ9Y4W2 734 aaKnown RBP18.48■□□□□ 0.55
SRSF6-202ENST00000483871 PIGBQ92521 554 aa18.47■□□□□ 0.55
SRSF6-202ENST00000483871 TAF7Q15545 349 aaPredicted RBP18.47■□□□□ 0.55
SRSF6-202ENST00000483871 WDR63Q8IWG1 891 aa18.47■□□□□ 0.55
SRSF6-202ENST00000483871 CDCA7LQ96GN5 454 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms