RNA–Protein interactions for RNA: ENST00000483558.5

PKD1-215, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 577 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-215ENST00000483558 WDR90Q96KV7 1748 aa24.42■■□□□ 1.5
PKD1-215ENST00000483558 KLRG1Q96E93 195 aa24.41■■□□□ 1.5
PKD1-215ENST00000483558 ZNF692Q9BU19 519 aaPredicted RBP24.4■■□□□ 1.5
PKD1-215ENST00000483558 DOT1LQ8TEK3 1739 aa24.39■■□□□ 1.5
PKD1-215ENST00000483558 NMRK2Q9NPI5 230 aa24.39■■□□□ 1.49
PKD1-215ENST00000483558 NSD2O96028 1365 aa24.39■■□□□ 1.49
PKD1-215ENST00000483558 TTC21AQ8NDW8 1320 aa24.38■■□□□ 1.49
PKD1-215ENST00000483558 LTN1O94822 1766 aa24.38■■□□□ 1.49
PKD1-215ENST00000483558 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.37■■□□□ 1.49
PKD1-215ENST00000483558 JMYQ8N9B5 988 aa24.37■■□□□ 1.49
PKD1-215ENST00000483558 ANKRD36BQ8N2N9 1353 aa24.37■■□□□ 1.49
PKD1-215ENST00000483558 KIAA1210Q9ULL0 1709 aa24.36■■□□□ 1.49
PKD1-215ENST00000483558 SMIM5Q71RC9 77 aa24.36■■□□□ 1.49
PKD1-215ENST00000483558 LTV1Q96GA3 475 aaPredicted RBP24.36■■□□□ 1.49
PKD1-215ENST00000483558 PCNTO95613 3336 aa24.33■■□□□ 1.49
PKD1-215ENST00000483558 KTN1Q86UP2 1357 aaKnown RBP24.32■■□□□ 1.48
PKD1-215ENST00000483558 RAB3GAP2Q9H2M9 1393 aa24.32■■□□□ 1.48
PKD1-215ENST00000483558 EVC2Q86UK5 1308 aa24.32■■□□□ 1.48
PKD1-215ENST00000483558 NME9Q86XW9 330 aa24.31■■□□□ 1.48
PKD1-215ENST00000483558 USP47Q96K76 1375 aa24.3■■□□□ 1.48
PKD1-215ENST00000483558 AMIGO3Q86WK7 504 aa24.3■■□□□ 1.48
PKD1-215ENST00000483558 C5P01031 1676 aa24.29■■□□□ 1.48
PKD1-215ENST00000483558 FLAD1Q8NFF5 587 aa24.28■■□□□ 1.48
PKD1-215ENST00000483558 RBM46Q8TBY0 533 aaKnown RBP24.28■■□□□ 1.48
PKD1-215ENST00000483558 PHF14O94880 888 aa24.27■■□□□ 1.48
PKD1-215ENST00000483558 C16orf71Q8IYS4 520 aaPredicted RBP24.27■■□□□ 1.48
PKD1-215ENST00000483558 TAF1LQ8IZX4 1826 aa24.26■■□□□ 1.47
PKD1-215ENST00000483558 ARHGAP27Q6ZUM4 889 aa24.26■■□□□ 1.47
PKD1-215ENST00000483558 ZCRB1Q8TBF4 217 aaKnown RBP24.26■■□□□ 1.47
PKD1-215ENST00000483558 BCS1LQ9Y276 419 aa24.24■■□□□ 1.47
PKD1-215ENST00000483558 USP31Q70CQ4 1352 aa24.24■■□□□ 1.47
PKD1-215ENST00000483558 USP54Q70EL1 1684 aa24.24■■□□□ 1.47
PKD1-215ENST00000483558 RGPD2P0DJD1 1756 aa24.23■■□□□ 1.47
PKD1-215ENST00000483558 N4BP2Q86UW6 1770 aaPredicted RBP24.21■■□□□ 1.47
PKD1-215ENST00000483558 CICQ96RK0 1608 aaPredicted RBP24.21■■□□□ 1.47
PKD1-215ENST00000483558 SLC34A2O95436 690 aa24.21■■□□□ 1.47
PKD1-215ENST00000483558 AK7Q96M32 723 aa24.21■■□□□ 1.47
PKD1-215ENST00000483558 IP6K1Q92551 441 aa24.2■■□□□ 1.46
PKD1-215ENST00000483558 MON2Q7Z3U7 1717 aa24.2■■□□□ 1.46
PKD1-215ENST00000483558 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.19■■□□□ 1.46
PKD1-215ENST00000483558 A0A0G2JLW4 131 aa24.19■■□□□ 1.46
PKD1-215ENST00000483558 HSPA1AP0DMV8 641 aaKnown RBP24.19■■□□□ 1.46
PKD1-215ENST00000483558 HSPA1BP0DMV9 641 aaKnown RBP24.19■■□□□ 1.46
PKD1-215ENST00000483558 FSTL1Q12841 308 aa24.19■■□□□ 1.46
PKD1-215ENST00000483558 TOGARAM1Q9Y4F4 1720 aa24.18■■□□□ 1.46
PKD1-215ENST00000483558 MPRIPQ6WCQ1 1025 aa24.17■■□□□ 1.46
PKD1-215ENST00000483558 RRAGCQ9HB90 399 aa24.17■■□□□ 1.46
PKD1-215ENST00000483558 C4BP0C0L5 1744 aa24.17■■□□□ 1.46
PKD1-215ENST00000483558 UBR3Q6ZT12 1888 aa24.17■■□□□ 1.46
PKD1-215ENST00000483558 C9orf131Q5VYM1 1079 aa24.16■■□□□ 1.46
PKD1-215ENST00000483558 PALLDQ8WX93 1383 aa24.16■■□□□ 1.46
PKD1-215ENST00000483558 MEGF6O75095 1541 aa24.15■■□□□ 1.46
PKD1-215ENST00000483558 FBLN1P23142 703 aa24.14■■□□□ 1.45
PKD1-215ENST00000483558 PXDNLA1KZ92 1463 aa24.13■■□□□ 1.45
PKD1-215ENST00000483558 FAM208AQ9UK61 1670 aaKnown RBP24.13■■□□□ 1.45
PKD1-215ENST00000483558 SBNO2Q9Y2G9 1366 aa24.13■■□□□ 1.45
PKD1-215ENST00000483558 KCPQ6ZWJ8 1503 aa24.12■■□□□ 1.45
PKD1-215ENST00000483558 FCHSD2O94868 740 aa24.12■■□□□ 1.45
PKD1-215ENST00000483558 USHBP1Q8N6Y0 703 aa24.12■■□□□ 1.45
PKD1-215ENST00000483558 KIAA1551Q9HCM1 1747 aa24.12■■□□□ 1.45
PKD1-215ENST00000483558 MMP10P09238 476 aa24.11■■□□□ 1.45
PKD1-215ENST00000483558 TMC1Q8TDI8 760 aa24.11■■□□□ 1.45
PKD1-215ENST00000483558 DPEP1P16444 411 aa24.1■■□□□ 1.45
PKD1-215ENST00000483558 HOXC9P31274 260 aa24.07■■□□□ 1.44
PKD1-215ENST00000483558 TGFB2P61812 414 aa24.07■■□□□ 1.44
PKD1-215ENST00000483558 NBPF6Q5VWK0 638 aa24.07■■□□□ 1.44
PKD1-215ENST00000483558 LINC00116Q8NCU8 138 aa24.07■■□□□ 1.44
PKD1-215ENST00000483558 NBPF4Q96M43 638 aa24.07■■□□□ 1.44
PKD1-215ENST00000483558 KIF13BQ9NQT8 1826 aa24.07■■□□□ 1.44
PKD1-215ENST00000483558 CD163L1Q9NR16 1453 aa24.07■■□□□ 1.44
PKD1-215ENST00000483558 ITGB4P16144 1822 aa24.06■■□□□ 1.44
PKD1-215ENST00000483558 HMGB2P26583 209 aaKnown RBP24.06■■□□□ 1.44
PKD1-215ENST00000483558 SSFA2P28290 1259 aa24.06■■□□□ 1.44
PKD1-215ENST00000483558 AMPHP49418 695 aa24.06■■□□□ 1.44
PKD1-215ENST00000483558 SMC1BQ8NDV3 1235 aa24.06■■□□□ 1.44
PKD1-215ENST00000483558 SLC12A5Q9H2X9 1139 aa24.06■■□□□ 1.44
PKD1-215ENST00000483558 KDM2BQ8NHM5 1336 aa24.06■■□□□ 1.44
PKD1-215ENST00000483558 MAP3K19Q56UN5 1328 aa24.05■■□□□ 1.44
PKD1-215ENST00000483558 HDGFL2Q7Z4V5 671 aaPredicted RBP24.04■■□□□ 1.44
PKD1-215ENST00000483558 GNPATO15228 680 aa24.03■■□□□ 1.44
PKD1-215ENST00000483558 SMARCC1Q92922 1105 aaPredicted RBP24.03■■□□□ 1.44
PKD1-215ENST00000483558 RNF181Q9P0P0 153 aa24.03■■□□□ 1.44
PKD1-215ENST00000483558 PKD1L3Q7Z443 1732 aa24.03■■□□□ 1.44
PKD1-215ENST00000483558 RAPGEF4Q8WZA2 1011 aa24.02■■□□□ 1.44
PKD1-215ENST00000483558 PIGBQ92521 554 aa24.01■■□□□ 1.43
PKD1-215ENST00000483558 PLEKHG2Q9H7P9 1386 aa24.01■■□□□ 1.43
PKD1-215ENST00000483558 BRCA1P38398 1863 aaKnown RBP24■■□□□ 1.43
PKD1-215ENST00000483558 TATP17735 454 aaPredicted RBP24■■□□□ 1.43
PKD1-215ENST00000483558 NSD3Q9BZ95 1437 aa24■■□□□ 1.43
PKD1-215ENST00000483558 LOC102724428A0A0B4J2F2 783 aa23.98■■□□□ 1.43
PKD1-215ENST00000483558 CYP27B1O15528 508 aa23.98■■□□□ 1.43
PKD1-215ENST00000483558 KCNA3P22001 575 aa23.98■■□□□ 1.43
PKD1-215ENST00000483558 SIK1P57059 783 aa23.98■■□□□ 1.43
PKD1-215ENST00000483558 ITPK1Q13572 414 aa23.98■■□□□ 1.43
PKD1-215ENST00000483558 MAP2P11137 1827 aaKnown RBP23.98■■□□□ 1.43
PKD1-215ENST00000483558 SBF1O95248 1867 aa23.98■■□□□ 1.43
PKD1-215ENST00000483558 EDC4Q6P2E9 1401 aaKnown RBP23.97■■□□□ 1.43
PKD1-215ENST00000483558 ARFGEF1Q9Y6D6 1849 aa23.97■■□□□ 1.43
PKD1-215ENST00000483558 TNRC6CQ9HCJ0 1690 aaKnown RBP23.96■■□□□ 1.43
PKD1-215ENST00000483558 C10orf71Q711Q0 1435 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms