RNA–Protein interactions for RNA: ENST00000483039.5

TNFSF13-208, Transcript of TNF superfamily member 13, humanhuman

TSL 2 BASIC

Gene TNFSF13, Length 959 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-208ENST00000483039 NSD2O96028 1365 aa25.7■■□□□ 1.71
TNFSF13-208ENST00000483039 HDGFL2Q7Z4V5 671 aaPredicted RBP25.7■■□□□ 1.7
TNFSF13-208ENST00000483039 COL23A1Q86Y22 540 aaPredicted RBP25.7■■□□□ 1.7
TNFSF13-208ENST00000483039 CCNL1Q9UK58 526 aaPredicted RBP25.7■■□□□ 1.7
TNFSF13-208ENST00000483039 MSH5O43196 834 aa25.69■■□□□ 1.7
TNFSF13-208ENST00000483039 GPBP1L1Q9HC44 474 aaPredicted RBP25.69■■□□□ 1.7
TNFSF13-208ENST00000483039 EDC4Q6P2E9 1401 aaKnown RBP25.69■■□□□ 1.7
TNFSF13-208ENST00000483039 LTV1Q96GA3 475 aaPredicted RBP25.67■■□□□ 1.7
TNFSF13-208ENST00000483039 HSPA6P17066 643 aa25.66■■□□□ 1.7
TNFSF13-208ENST00000483039 TMC1Q8TDI8 760 aa25.66■■□□□ 1.7
TNFSF13-208ENST00000483039 CD2APQ9Y5K6 639 aa25.66■■□□□ 1.7
TNFSF13-208ENST00000483039 ZCRB1Q8TBF4 217 aaKnown RBP25.65■■□□□ 1.7
TNFSF13-208ENST00000483039 ADCY9O60503 1353 aa25.64■■□□□ 1.69
TNFSF13-208ENST00000483039 USP47Q96K76 1375 aa25.64■■□□□ 1.69
TNFSF13-208ENST00000483039 MSL1Q68DK7 614 aa25.63■■□□□ 1.69
TNFSF13-208ENST00000483039 SLC12A5Q9H2X9 1139 aa25.63■■□□□ 1.69
TNFSF13-208ENST00000483039 TERF2IPQ9NYB0 399 aa25.62■■□□□ 1.69
TNFSF13-208ENST00000483039 HMGB2P26583 209 aaKnown RBP25.61■■□□□ 1.69
TNFSF13-208ENST00000483039 A0A1W2PP64 1363 aa25.6■■□□□ 1.69
TNFSF13-208ENST00000483039 FLAD1Q8NFF5 587 aa25.59■■□□□ 1.69
TNFSF13-208ENST00000483039 C5P01031 1676 aa25.58■■□□□ 1.69
TNFSF13-208ENST00000483039 RGPD2P0DJD1 1756 aa25.58■■□□□ 1.69
TNFSF13-208ENST00000483039 MEGF6O75095 1541 aa25.58■■□□□ 1.68
TNFSF13-208ENST00000483039 HOXC9P31274 260 aa25.57■■□□□ 1.68
TNFSF13-208ENST00000483039 ZNF526Q8TF50 670 aaPredicted RBP25.57■■□□□ 1.68
TNFSF13-208ENST00000483039 SIN3AQ96ST3 1273 aa25.57■■□□□ 1.68
TNFSF13-208ENST00000483039 MAP3K19Q56UN5 1328 aa25.57■■□□□ 1.68
TNFSF13-208ENST00000483039 AMPHP49418 695 aa25.55■■□□□ 1.68
TNFSF13-208ENST00000483039 PUS7Q96PZ0 661 aaKnown RBP25.54■■□□□ 1.68
TNFSF13-208ENST00000483039 CGNL1Q0VF96 1302 aa25.54■■□□□ 1.68
TNFSF13-208ENST00000483039 TAF1LQ8IZX4 1826 aa25.53■■□□□ 1.68
TNFSF13-208ENST00000483039 COG3Q96JB2 828 aa25.53■■□□□ 1.68
TNFSF13-208ENST00000483039 NEUROD1Q13562 356 aa25.51■■□□□ 1.67
TNFSF13-208ENST00000483039 CARD11Q9BXL7 1154 aa25.51■■□□□ 1.67
TNFSF13-208ENST00000483039 PALLDQ8WX93 1383 aa25.49■■□□□ 1.67
TNFSF13-208ENST00000483039 IGSF1Q8N6C5 1336 aa25.49■■□□□ 1.67
TNFSF13-208ENST00000483039 NBPF6Q5VWK0 638 aa25.49■■□□□ 1.67
TNFSF13-208ENST00000483039 NBPF4Q96M43 638 aa25.49■■□□□ 1.67
TNFSF13-208ENST00000483039 RTL1A6NKG5 1358 aa25.48■■□□□ 1.67
TNFSF13-208ENST00000483039 FBLN1P23142 703 aa25.48■■□□□ 1.67
TNFSF13-208ENST00000483039 RAPGEF4Q8WZA2 1011 aa25.48■■□□□ 1.67
TNFSF13-208ENST00000483039 KIF3CO14782 793 aa25.47■■□□□ 1.67
TNFSF13-208ENST00000483039 C4BP0C0L5 1744 aa25.46■■□□□ 1.67
TNFSF13-208ENST00000483039 TATP17735 454 aaPredicted RBP25.45■■□□□ 1.66
TNFSF13-208ENST00000483039 AK7Q96M32 723 aa25.45■■□□□ 1.66
TNFSF13-208ENST00000483039 PCDH11XQ9BZA7 1347 aa25.44■■□□□ 1.66
TNFSF13-208ENST00000483039 PCDH11YQ9BZA8 1340 aa25.44■■□□□ 1.66
TNFSF13-208ENST00000483039 USHBP1Q8N6Y0 703 aa25.44■■□□□ 1.66
TNFSF13-208ENST00000483039 UBR3Q6ZT12 1888 aa25.43■■□□□ 1.66
TNFSF13-208ENST00000483039 MPRIPQ6WCQ1 1025 aa25.43■■□□□ 1.66
TNFSF13-208ENST00000483039 SMARCC1Q92922 1105 aaPredicted RBP25.43■■□□□ 1.66
TNFSF13-208ENST00000483039 NSD3Q9BZ95 1437 aa25.43■■□□□ 1.66
TNFSF13-208ENST00000483039 TOGARAM1Q9Y4F4 1720 aa25.43■■□□□ 1.66
TNFSF13-208ENST00000483039 APLP1P51693 650 aa25.42■■□□□ 1.66
TNFSF13-208ENST00000483039 WWC3Q9ULE0 1092 aa25.42■■□□□ 1.66
TNFSF13-208ENST00000483039 SMG6Q86US8 1419 aaKnown RBP25.42■■□□□ 1.66
TNFSF13-208ENST00000483039 AMIGO3Q86WK7 504 aa25.41■■□□□ 1.66
TNFSF13-208ENST00000483039 RRS1Q15050 365 aaKnown RBP25.4■■□□□ 1.66
TNFSF13-208ENST00000483039 ITGB4P16144 1822 aa25.4■■□□□ 1.66
TNFSF13-208ENST00000483039 CICQ96RK0 1608 aaPredicted RBP25.39■■□□□ 1.66
TNFSF13-208ENST00000483039 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.39■■□□□ 1.66
TNFSF13-208ENST00000483039 PHF14O94880 888 aa25.39■■□□□ 1.66
TNFSF13-208ENST00000483039 SSFA2P28290 1259 aa25.38■■□□□ 1.65
TNFSF13-208ENST00000483039 CYP27B1O15528 508 aa25.36■■□□□ 1.65
TNFSF13-208ENST00000483039 TOMM70O94826 608 aa25.36■■□□□ 1.65
TNFSF13-208ENST00000483039 INSRP06213 1382 aa25.35■■□□□ 1.65
TNFSF13-208ENST00000483039 SMIM5Q71RC9 77 aa25.35■■□□□ 1.65
TNFSF13-208ENST00000483039 DNAJC5GQ8N7S2 189 aa25.35■■□□□ 1.65
TNFSF13-208ENST00000483039 MAP2P11137 1827 aaKnown RBP25.33■■□□□ 1.65
TNFSF13-208ENST00000483039 PIGBQ92521 554 aa25.33■■□□□ 1.65
TNFSF13-208ENST00000483039 TESK2Q96S53 571 aa25.33■■□□□ 1.65
TNFSF13-208ENST00000483039 FYB1O15117 783 aa25.32■■□□□ 1.64
TNFSF13-208ENST00000483039 SLC24A1O60721 1099 aa25.32■■□□□ 1.64
TNFSF13-208ENST00000483039 HSP90AB2PQ58FF8 381 aa25.32■■□□□ 1.64
TNFSF13-208ENST00000483039 GGNBP2Q9H3C7 697 aa25.31■■□□□ 1.64
TNFSF13-208ENST00000483039 PKD1L3Q7Z443 1732 aa25.3■■□□□ 1.64
TNFSF13-208ENST00000483039 LOC102724428A0A0B4J2F2 783 aa25.3■■□□□ 1.64
TNFSF13-208ENST00000483039 SIK1P57059 783 aa25.3■■□□□ 1.64
TNFSF13-208ENST00000483039 LINC00116Q8NCU8 138 aa25.3■■□□□ 1.64
TNFSF13-208ENST00000483039 KIF13BQ9NQT8 1826 aa25.3■■□□□ 1.64
TNFSF13-208ENST00000483039 FLT4P35916 1363 aa25.3■■□□□ 1.64
TNFSF13-208ENST00000483039 KIF24Q5T7B8 1368 aa25.3■■□□□ 1.64
TNFSF13-208ENST00000483039 NKX1-1Q15270 411 aaPredicted RBP25.29■■□□□ 1.64
TNFSF13-208ENST00000483039 PXDNLA1KZ92 1463 aa25.28■■□□□ 1.64
TNFSF13-208ENST00000483039 TGFB2P61812 414 aa25.28■■□□□ 1.64
TNFSF13-208ENST00000483039 KIAA1551Q9HCM1 1747 aa25.27■■□□□ 1.64
TNFSF13-208ENST00000483039 ST20-MTHFSA0A0A6YYL1 179 aa25.27■■□□□ 1.64
TNFSF13-208ENST00000483039 GNPATO15228 680 aa25.27■■□□□ 1.64
TNFSF13-208ENST00000483039 MMP10P09238 476 aa25.27■■□□□ 1.64
TNFSF13-208ENST00000483039 BCS1LQ9Y276 419 aa25.25■■□□□ 1.63
TNFSF13-208ENST00000483039 N4BP2Q86UW6 1770 aaPredicted RBP25.25■■□□□ 1.63
TNFSF13-208ENST00000483039 WDR90Q96KV7 1748 aa25.24■■□□□ 1.63
TNFSF13-208ENST00000483039 NMRK2Q9NPI5 230 aa25.24■■□□□ 1.63
TNFSF13-208ENST00000483039 ATP6V1AP38606 617 aa25.23■■□□□ 1.63
TNFSF13-208ENST00000483039 ITPK1Q13572 414 aa25.23■■□□□ 1.63
TNFSF13-208ENST00000483039 TMOD3Q9NYL9 352 aa25.23■■□□□ 1.63
TNFSF13-208ENST00000483039 SPG7Q9UQ90 795 aa25.23■■□□□ 1.63
TNFSF13-208ENST00000483039 ARHGAP27Q6ZUM4 889 aa25.22■■□□□ 1.63
TNFSF13-208ENST00000483039 RBM46Q8TBY0 533 aaKnown RBP25.22■■□□□ 1.63
TNFSF13-208ENST00000483039 NCAPD2Q15021 1401 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms