RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 MAP2P11137 1827 aaKnown RBP18.97■□□□□ 0.63
VARS-225ENST00000482996 KCNQ2O43526 872 aa18.97■□□□□ 0.63
VARS-225ENST00000482996 RREB1Q92766 1687 aa18.97■□□□□ 0.63
VARS-225ENST00000482996 KAT6BQ8WYB5 2073 aa18.97■□□□□ 0.63
VARS-225ENST00000482996 RGPD3A6NKT7 1758 aaPredicted RBP18.96■□□□□ 0.63
VARS-225ENST00000482996 RGPD4Q7Z3J3 1758 aa18.96■□□□□ 0.63
VARS-225ENST00000482996 NHSQ6T4R5 1651 aa18.95■□□□□ 0.62
VARS-225ENST00000482996 AMER1Q5JTC6 1135 aaPredicted RBP18.94■□□□□ 0.62
VARS-225ENST00000482996 NUP188Q5SRE5 1749 aa18.94■□□□□ 0.62
VARS-225ENST00000482996 EYA1Q99502 592 aa18.93■□□□□ 0.62
VARS-225ENST00000482996 EIF4A2Q14240 407 aaKnown RBP18.92■□□□□ 0.62
VARS-225ENST00000482996 TXNRD1Q16881 649 aa18.92■□□□□ 0.62
VARS-225ENST00000482996 PCDH11XQ9BZA7 1347 aa18.92■□□□□ 0.62
VARS-225ENST00000482996 PCDH11YQ9BZA8 1340 aa18.92■□□□□ 0.62
VARS-225ENST00000482996 PROM2Q8N271 834 aa18.91■□□□□ 0.62
VARS-225ENST00000482996 SYTL4Q96C24 671 aaPredicted RBP18.91■□□□□ 0.62
VARS-225ENST00000482996 NCAPD2Q15021 1401 aa18.91■□□□□ 0.62
VARS-225ENST00000482996 PER1O15534 1290 aaPredicted RBP18.89■□□□□ 0.61
VARS-225ENST00000482996 PRIM1P49642 420 aaKnown RBP18.89■□□□□ 0.61
VARS-225ENST00000482996 SPG7Q9UQ90 795 aa18.89■□□□□ 0.61
VARS-225ENST00000482996 SHANK3Q9BYB0 1731 aa18.88■□□□□ 0.61
VARS-225ENST00000482996 BTAF1O14981 1849 aa18.87■□□□□ 0.61
VARS-225ENST00000482996 CC2D1BQ5T0F9 858 aaKnown RBP18.87■□□□□ 0.61
VARS-225ENST00000482996 STK32BQ9NY57 414 aa18.87■□□□□ 0.61
VARS-225ENST00000482996 ANO8Q9HCE9 1232 aaPredicted RBP18.86■□□□□ 0.61
VARS-225ENST00000482996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.86■□□□□ 0.61
VARS-225ENST00000482996 IGSF1Q8N6C5 1336 aa18.85■□□□□ 0.61
VARS-225ENST00000482996 CYP27B1O15528 508 aa18.85■□□□□ 0.61
VARS-225ENST00000482996 LRP5O75197 1615 aa18.85■□□□□ 0.61
VARS-225ENST00000482996 NPC1L1Q9UHC9 1359 aa18.84■□□□□ 0.61
VARS-225ENST00000482996 DOT1LQ8TEK3 1739 aa18.84■□□□□ 0.61
VARS-225ENST00000482996 PLEKHG2Q9H7P9 1386 aa18.83■□□□□ 0.61
VARS-225ENST00000482996 SLC27A3Q5K4L6 730 aa18.83■□□□□ 0.6
VARS-225ENST00000482996 PKD1L3Q7Z443 1732 aa18.83■□□□□ 0.6
VARS-225ENST00000482996 MTHFSP49914 203 aa18.82■□□□□ 0.6
VARS-225ENST00000482996 SLC15A2Q16348 729 aa18.82■□□□□ 0.6
VARS-225ENST00000482996 CNGB1Q14028 1251 aaPredicted RBP18.81■□□□□ 0.6
VARS-225ENST00000482996 IFNL2Q8IZJ0 200 aa18.81■□□□□ 0.6
VARS-225ENST00000482996 NKX1-1Q15270 411 aaPredicted RBP18.8■□□□□ 0.6
VARS-225ENST00000482996 PLEKHO1Q53GL0 409 aaPredicted RBP18.8■□□□□ 0.6
VARS-225ENST00000482996 IL13P35225 146 aa18.79■□□□□ 0.6
VARS-225ENST00000482996 MPRIPQ6WCQ1 1025 aa18.79■□□□□ 0.6
VARS-225ENST00000482996 SPON1Q9HCB6 807 aa18.79■□□□□ 0.6
VARS-225ENST00000482996 LRRC4BQ9NT99 713 aa18.79■□□□□ 0.6
VARS-225ENST00000482996 PHKG2P15735 406 aa18.78■□□□□ 0.6
VARS-225ENST00000482996 AMOTQ4VCS5 1084 aa18.78■□□□□ 0.6
VARS-225ENST00000482996 SULT6B1Q6IMI4 303 aa18.77■□□□□ 0.6
VARS-225ENST00000482996 AEBP1Q8IUX7 1158 aa18.77■□□□□ 0.6
VARS-225ENST00000482996 CCNL1Q9UK58 526 aaPredicted RBP18.77■□□□□ 0.6
VARS-225ENST00000482996 HSP90AB1P08238 724 aaKnown RBP18.76■□□□□ 0.59
VARS-225ENST00000482996 HMGB2P26583 209 aaKnown RBP18.76■□□□□ 0.59
VARS-225ENST00000482996 SMARCC1Q92922 1105 aaPredicted RBP18.76■□□□□ 0.59
VARS-225ENST00000482996 DIAPH1O60610 1272 aaKnown RBP18.75■□□□□ 0.59
VARS-225ENST00000482996 ZNF530Q6P9A1 599 aaPredicted RBP18.75■□□□□ 0.59
VARS-225ENST00000482996 PAPPAQ13219 1627 aa18.74■□□□□ 0.59
VARS-225ENST00000482996 KDRP35968 1356 aa18.74■□□□□ 0.59
VARS-225ENST00000482996 PALLDQ8WX93 1383 aa18.74■□□□□ 0.59
VARS-225ENST00000482996 ZNF827Q17R98 1081 aa18.74■□□□□ 0.59
VARS-225ENST00000482996 TMOD3Q9NYL9 352 aa18.74■□□□□ 0.59
VARS-225ENST00000482996 KCNQ4P56696 695 aa18.73■□□□□ 0.59
VARS-225ENST00000482996 PIGBQ92521 554 aa18.73■□□□□ 0.59
VARS-225ENST00000482996 AKT1S1Q96B36 256 aa18.73■□□□□ 0.59
VARS-225ENST00000482996 PDGFDQ9GZP0 370 aaPredicted RBP18.73■□□□□ 0.59
VARS-225ENST00000482996 PPP1R1BQ9UD71 204 aaPredicted RBP18.73■□□□□ 0.59
VARS-225ENST00000482996 LY75O60449 1722 aa18.73■□□□□ 0.59
VARS-225ENST00000482996 TOGARAM1Q9Y4F4 1720 aa18.73■□□□□ 0.59
VARS-225ENST00000482996 ZBTB7AO95365 584 aa18.72■□□□□ 0.59
VARS-225ENST00000482996 C1orf141Q5JVX7 400 aa18.72■□□□□ 0.59
VARS-225ENST00000482996 DCAF5Q96JK2 942 aa18.72■□□□□ 0.59
VARS-225ENST00000482996 CASZ1Q86V15 1759 aa18.72■□□□□ 0.59
VARS-225ENST00000482996 CFAP53Q96M91 514 aa18.71■□□□□ 0.59
VARS-225ENST00000482996 TFCP2L1Q9NZI6 479 aa18.71■□□□□ 0.59
VARS-225ENST00000482996 ITGB4P16144 1822 aa18.7■□□□□ 0.58
VARS-225ENST00000482996 ERVV-2B6SEH9 535 aa18.7■□□□□ 0.58
VARS-225ENST00000482996 MTFR1LQ9H019 292 aa18.7■□□□□ 0.58
VARS-225ENST00000482996 HMOX1P09601 288 aa18.69■□□□□ 0.58
VARS-225ENST00000482996 ATF5Q9Y2D1 282 aaPredicted RBP18.69■□□□□ 0.58
VARS-225ENST00000482996 U2SURPO15042 1029 aaKnown RBP18.68■□□□□ 0.58
VARS-225ENST00000482996 SLC16A10Q8TF71 515 aa18.67■□□□□ 0.58
VARS-225ENST00000482996 COL3A1P02461 1466 aaPredicted RBP18.66■□□□□ 0.58
VARS-225ENST00000482996 CABP4P57796 275 aa18.66■□□□□ 0.58
VARS-225ENST00000482996 ASAP1Q9ULH1 1129 aa18.66■□□□□ 0.58
VARS-225ENST00000482996 PNPLA7Q6ZV29 1317 aa18.66■□□□□ 0.58
VARS-225ENST00000482996 LOC102724428A0A0B4J2F2 783 aa18.65■□□□□ 0.58
VARS-225ENST00000482996 PPP2R1AP30153 589 aa18.65■□□□□ 0.58
VARS-225ENST00000482996 SIK1P57059 783 aa18.65■□□□□ 0.58
VARS-225ENST00000482996 AKAP4Q5JQC9 854 aa18.65■□□□□ 0.58
VARS-225ENST00000482996 KDM6AO15550 1401 aaPredicted RBP18.65■□□□□ 0.58
VARS-225ENST00000482996 PTGER2P43116 358 aa18.64■□□□□ 0.57
VARS-225ENST00000482996 ATG3Q9NT62 314 aa18.64■□□□□ 0.57
VARS-225ENST00000482996 NUDCQ9Y266 331 aa18.64■□□□□ 0.57
VARS-225ENST00000482996 QSER1Q2KHR3 1735 aa18.63■□□□□ 0.57
VARS-225ENST00000482996 MSH5O43196 834 aa18.63■□□□□ 0.57
VARS-225ENST00000482996 AK7Q96M32 723 aa18.63■□□□□ 0.57
VARS-225ENST00000482996 FLAD1Q8NFF5 587 aa18.62■□□□□ 0.57
VARS-225ENST00000482996 C5P01031 1676 aa18.62■□□□□ 0.57
VARS-225ENST00000482996 ATP6V1AP38606 617 aa18.61■□□□□ 0.57
VARS-225ENST00000482996 POLD1P28340 1107 aa18.6■□□□□ 0.57
VARS-225ENST00000482996 MTHFSDQ2M296 383 aaKnown RBP18.6■□□□□ 0.57
VARS-225ENST00000482996 NFATC2IPQ8NCF5 419 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms