RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 ZCRB1Q8TBF4 217 aaKnown RBP32.25■■■□□ 2.75
RHBDF1-208ENST00000482904 TATP17735 454 aaPredicted RBP32.24■■■□□ 2.75
RHBDF1-208ENST00000482904 POLKQ9UBT6 870 aa32.23■■■□□ 2.75
RHBDF1-208ENST00000482904 WASHC2AQ641Q2 1341 aa32.23■■■□□ 2.75
RHBDF1-208ENST00000482904 LRP5O75197 1615 aa32.22■■■□□ 2.75
RHBDF1-208ENST00000482904 MORC1Q86VD1 984 aa32.2■■■□□ 2.75
RHBDF1-208ENST00000482904 MAP2P11137 1827 aaKnown RBP32.19■■■□□ 2.74
RHBDF1-208ENST00000482904 SHANK3Q9BYB0 1731 aa32.18■■■□□ 2.74
RHBDF1-208ENST00000482904 TXNRD1Q16881 649 aa32.18■■■□□ 2.74
RHBDF1-208ENST00000482904 SYTL4Q96C24 671 aaPredicted RBP32.17■■■□□ 2.74
RHBDF1-208ENST00000482904 PCDH11XQ9BZA7 1347 aa32.16■■■□□ 2.74
RHBDF1-208ENST00000482904 PCDH11YQ9BZA8 1340 aa32.16■■■□□ 2.74
RHBDF1-208ENST00000482904 DOT1LQ8TEK3 1739 aa32.15■■■□□ 2.74
RHBDF1-208ENST00000482904 BTAF1O14981 1849 aa32.15■■■□□ 2.74
RHBDF1-208ENST00000482904 SRCAPQ6ZRS2 3230 aa32.14■■■□□ 2.74
RHBDF1-208ENST00000482904 NCAPD2Q15021 1401 aa32.13■■■□□ 2.73
RHBDF1-208ENST00000482904 PROM2Q8N271 834 aa32.13■■■□□ 2.73
RHBDF1-208ENST00000482904 ANO8Q9HCE9 1232 aaPredicted RBP32.13■■■□□ 2.73
RHBDF1-208ENST00000482904 EIF4A2Q14240 407 aaKnown RBP32.11■■■□□ 2.73
RHBDF1-208ENST00000482904 EYA1Q99502 592 aa32.11■■■□□ 2.73
RHBDF1-208ENST00000482904 PRIM1P49642 420 aaKnown RBP32.1■■■□□ 2.73
RHBDF1-208ENST00000482904 STK32BQ9NY57 414 aa32.09■■■□□ 2.73
RHBDF1-208ENST00000482904 AMER1Q5JTC6 1135 aaPredicted RBP32.08■■■□□ 2.73
RHBDF1-208ENST00000482904 PKD1L3Q7Z443 1732 aa32.06■■■□□ 2.72
RHBDF1-208ENST00000482904 KAT6BQ8WYB5 2073 aa32.05■■■□□ 2.72
RHBDF1-208ENST00000482904 SPG7Q9UQ90 795 aa32.05■■■□□ 2.72
RHBDF1-208ENST00000482904 CYP27B1O15528 508 aa32.02■■■□□ 2.72
RHBDF1-208ENST00000482904 CC2D1BQ5T0F9 858 aaKnown RBP32.01■■■□□ 2.71
RHBDF1-208ENST00000482904 IGSF1Q8N6C5 1336 aa32■■■□□ 2.71
RHBDF1-208ENST00000482904 SLC15A2Q16348 729 aa32■■■□□ 2.71
RHBDF1-208ENST00000482904 PAPPAQ13219 1627 aa31.99■■■□□ 2.71
RHBDF1-208ENST00000482904 PER1O15534 1290 aaPredicted RBP31.98■■■□□ 2.71
RHBDF1-208ENST00000482904 SLC27A3Q5K4L6 730 aa31.98■■■□□ 2.71
RHBDF1-208ENST00000482904 SPON1Q9HCB6 807 aa31.97■■■□□ 2.71
RHBDF1-208ENST00000482904 CNGB1Q14028 1251 aaPredicted RBP31.96■■■□□ 2.71
RHBDF1-208ENST00000482904 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.96■■■□□ 2.71
RHBDF1-208ENST00000482904 CASZ1Q86V15 1759 aa31.95■■■□□ 2.71
RHBDF1-208ENST00000482904 LRRC4BQ9NT99 713 aa31.95■■■□□ 2.71
RHBDF1-208ENST00000482904 PLEKHG2Q9H7P9 1386 aa31.94■■■□□ 2.7
RHBDF1-208ENST00000482904 MPRIPQ6WCQ1 1025 aa31.93■■■□□ 2.7
RHBDF1-208ENST00000482904 TOGARAM1Q9Y4F4 1720 aa31.92■■■□□ 2.7
RHBDF1-208ENST00000482904 PPP1R1BQ9UD71 204 aaPredicted RBP31.92■■■□□ 2.7
RHBDF1-208ENST00000482904 ZNF827Q17R98 1081 aa31.91■■■□□ 2.7
RHBDF1-208ENST00000482904 IFNL2Q8IZJ0 200 aa31.91■■■□□ 2.7
RHBDF1-208ENST00000482904 PDGFDQ9GZP0 370 aaPredicted RBP31.91■■■□□ 2.7
RHBDF1-208ENST00000482904 CCNL1Q9UK58 526 aaPredicted RBP31.91■■■□□ 2.7
RHBDF1-208ENST00000482904 NPC1L1Q9UHC9 1359 aa31.91■■■□□ 2.7
RHBDF1-208ENST00000482904 LY75O60449 1722 aa31.9■■■□□ 2.7
RHBDF1-208ENST00000482904 ZBTB7AO95365 584 aa31.89■■■□□ 2.7
RHBDF1-208ENST00000482904 PHKG2P15735 406 aa31.89■■■□□ 2.7
RHBDF1-208ENST00000482904 MTHFSP49914 203 aa31.89■■■□□ 2.7
RHBDF1-208ENST00000482904 KCNQ4P56696 695 aa31.89■■■□□ 2.7
RHBDF1-208ENST00000482904 NKX1-1Q15270 411 aaPredicted RBP31.89■■■□□ 2.7
RHBDF1-208ENST00000482904 PALLDQ8WX93 1383 aa31.88■■■□□ 2.69
RHBDF1-208ENST00000482904 AEBP1Q8IUX7 1158 aa31.87■■■□□ 2.69
RHBDF1-208ENST00000482904 IL13P35225 146 aa31.86■■■□□ 2.69
RHBDF1-208ENST00000482904 PLEKHO1Q53GL0 409 aaPredicted RBP31.86■■■□□ 2.69
RHBDF1-208ENST00000482904 SULT6B1Q6IMI4 303 aa31.86■■■□□ 2.69
RHBDF1-208ENST00000482904 AKT1S1Q96B36 256 aa31.84■■■□□ 2.69
RHBDF1-208ENST00000482904 TMOD3Q9NYL9 352 aa31.84■■■□□ 2.69
RHBDF1-208ENST00000482904 AMOTQ4VCS5 1084 aa31.83■■■□□ 2.69
RHBDF1-208ENST00000482904 ZNF530Q6P9A1 599 aaPredicted RBP31.83■■■□□ 2.69
RHBDF1-208ENST00000482904 SMARCC1Q92922 1105 aaPredicted RBP31.83■■■□□ 2.69
RHBDF1-208ENST00000482904 TFCP2L1Q9NZI6 479 aa31.83■■■□□ 2.69
RHBDF1-208ENST00000482904 ATF5Q9Y2D1 282 aaPredicted RBP31.82■■■□□ 2.68
RHBDF1-208ENST00000482904 ITGB4P16144 1822 aa31.82■■■□□ 2.68
RHBDF1-208ENST00000482904 KDRP35968 1356 aa31.81■■■□□ 2.68
RHBDF1-208ENST00000482904 PIGBQ92521 554 aa31.81■■■□□ 2.68
RHBDF1-208ENST00000482904 MTFR1LQ9H019 292 aa31.81■■■□□ 2.68
RHBDF1-208ENST00000482904 HSP90AB1P08238 724 aaKnown RBP31.8■■■□□ 2.68
RHBDF1-208ENST00000482904 DIAPH1O60610 1272 aaKnown RBP31.79■■■□□ 2.68
RHBDF1-208ENST00000482904 C1orf141Q5JVX7 400 aa31.78■■■□□ 2.68
RHBDF1-208ENST00000482904 HMGB2P26583 209 aaKnown RBP31.76■■■□□ 2.67
RHBDF1-208ENST00000482904 DCAF5Q96JK2 942 aa31.76■■■□□ 2.67
RHBDF1-208ENST00000482904 C5P01031 1676 aa31.76■■■□□ 2.67
RHBDF1-208ENST00000482904 PNPLA7Q6ZV29 1317 aa31.75■■■□□ 2.67
RHBDF1-208ENST00000482904 HMOX1P09601 288 aa31.74■■■□□ 2.67
RHBDF1-208ENST00000482904 QSER1Q2KHR3 1735 aa31.74■■■□□ 2.67
RHBDF1-208ENST00000482904 PTGER2P43116 358 aa31.73■■■□□ 2.67
RHBDF1-208ENST00000482904 KDM6AO15550 1401 aaPredicted RBP31.72■■■□□ 2.67
RHBDF1-208ENST00000482904 COL3A1P02461 1466 aaPredicted RBP31.72■■■□□ 2.67
RHBDF1-208ENST00000482904 TUBGCP6Q96RT7 1819 aa31.71■■■□□ 2.67
RHBDF1-208ENST00000482904 ERVV-2B6SEH9 535 aa31.71■■■□□ 2.67
RHBDF1-208ENST00000482904 MSH5O43196 834 aa31.7■■■□□ 2.67
RHBDF1-208ENST00000482904 ASAP1Q9ULH1 1129 aa31.7■■■□□ 2.67
RHBDF1-208ENST00000482904 U2SURPO15042 1029 aaKnown RBP31.69■■■□□ 2.66
RHBDF1-208ENST00000482904 LOC102724428A0A0B4J2F2 783 aa31.68■■■□□ 2.66
RHBDF1-208ENST00000482904 SIK1P57059 783 aa31.68■■■□□ 2.66
RHBDF1-208ENST00000482904 CABP4P57796 275 aa31.68■■■□□ 2.66
RHBDF1-208ENST00000482904 SLC16A10Q8TF71 515 aa31.68■■■□□ 2.66
RHBDF1-208ENST00000482904 CFAP53Q96M91 514 aa31.68■■■□□ 2.66
RHBDF1-208ENST00000482904 AK7Q96M32 723 aa31.67■■■□□ 2.66
RHBDF1-208ENST00000482904 ATG3Q9NT62 314 aa31.65■■■□□ 2.66
RHBDF1-208ENST00000482904 C4BP0C0L5 1744 aa31.65■■■□□ 2.66
RHBDF1-208ENST00000482904 TAF1LQ8IZX4 1826 aa31.64■■■□□ 2.66
RHBDF1-208ENST00000482904 AKAP4Q5JQC9 854 aa31.64■■■□□ 2.66
RHBDF1-208ENST00000482904 SGIP1Q9BQI5 828 aa31.64■■■□□ 2.66
RHBDF1-208ENST00000482904 POLD1P28340 1107 aa31.63■■■□□ 2.65
RHBDF1-208ENST00000482904 ATP6V1AP38606 617 aa31.62■■■□□ 2.65
RHBDF1-208ENST00000482904 ARXQ96QS3 562 aa31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms