RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 RSPH6AQ9H0K4 717 aa20.38■□□□□ 0.85
CCM2-215ENST00000482714 AEBP1Q8IUX7 1158 aa20.37■□□□□ 0.85
CCM2-215ENST00000482714 SPG7Q9UQ90 795 aa20.37■□□□□ 0.85
CCM2-215ENST00000482714 DISP2A7MBM2 1401 aa20.37■□□□□ 0.85
CCM2-215ENST00000482714 DDB1Q16531 1140 aa20.37■□□□□ 0.85
CCM2-215ENST00000482714 ZCRB1Q8TBF4 217 aaKnown RBP20.37■□□□□ 0.85
CCM2-215ENST00000482714 SEPT12Q8IYM1 358 aa20.36■□□□□ 0.85
CCM2-215ENST00000482714 GLI3P10071 1580 aa20.36■□□□□ 0.85
CCM2-215ENST00000482714 PRKAR2BP31323 418 aa20.35■□□□□ 0.85
CCM2-215ENST00000482714 PLEKHF1Q96S99 279 aa20.35■□□□□ 0.85
CCM2-215ENST00000482714 RGPD2P0DJD1 1756 aa20.35■□□□□ 0.85
CCM2-215ENST00000482714 OVOS2A0A0G2JMS6 1433 aa20.33■□□□□ 0.85
CCM2-215ENST00000482714 PDE3BQ13370 1112 aa20.33■□□□□ 0.85
CCM2-215ENST00000482714 RUNDC1Q96C34 613 aa20.33■□□□□ 0.85
CCM2-215ENST00000482714 GAS2L2Q8NHY3 880 aa20.32■□□□□ 0.84
CCM2-215ENST00000482714 A0A0G2JS52 829 aa20.31■□□□□ 0.84
CCM2-215ENST00000482714 MYT1Q01538 1121 aa20.31■□□□□ 0.84
CCM2-215ENST00000482714 IFNL2Q8IZJ0 200 aa20.3■□□□□ 0.84
CCM2-215ENST00000482714 FAM9BQ8IZU0 186 aa20.3■□□□□ 0.84
CCM2-215ENST00000482714 MEGF6O75095 1541 aa20.3■□□□□ 0.84
CCM2-215ENST00000482714 NCBP3Q53F19 620 aaKnown RBP20.3■□□□□ 0.84
CCM2-215ENST00000482714 PHACTR3Q96KR7 559 aa20.3■□□□□ 0.84
CCM2-215ENST00000482714 PCDH11XQ9BZA7 1347 aa20.3■□□□□ 0.84
CCM2-215ENST00000482714 PCDH11YQ9BZA8 1340 aa20.3■□□□□ 0.84
CCM2-215ENST00000482714 MAPK8IP3Q9UPT6 1336 aa20.3■□□□□ 0.84
CCM2-215ENST00000482714 HSP90AB1P08238 724 aaKnown RBP20.29■□□□□ 0.84
CCM2-215ENST00000482714 NKX1-1Q15270 411 aaPredicted RBP20.28■□□□□ 0.84
CCM2-215ENST00000482714 MTHFSDQ2M296 383 aaKnown RBP20.28■□□□□ 0.84
CCM2-215ENST00000482714 KRT27Q7Z3Y8 459 aa20.28■□□□□ 0.84
CCM2-215ENST00000482714 NGEFQ8N5V2 710 aa20.28■□□□□ 0.84
CCM2-215ENST00000482714 THSD7AQ9UPZ6 1657 aa20.27■□□□□ 0.84
CCM2-215ENST00000482714 HTATSF1O43719 755 aaKnown RBP20.27■□□□□ 0.84
CCM2-215ENST00000482714 AKAP4Q5JQC9 854 aa20.27■□□□□ 0.84
CCM2-215ENST00000482714 PARP4Q9UKK3 1724 aaKnown RBP20.27■□□□□ 0.83
CCM2-215ENST00000482714 TNS2Q63HR2 1409 aa20.26■□□□□ 0.83
CCM2-215ENST00000482714 C1orf141Q5JVX7 400 aa20.26■□□□□ 0.83
CCM2-215ENST00000482714 DDX54Q8TDD1 881 aaKnown RBP20.26■□□□□ 0.83
CCM2-215ENST00000482714 RGS12O14924 1447 aa20.26■□□□□ 0.83
CCM2-215ENST00000482714 CYP27B1O15528 508 aa20.25■□□□□ 0.83
CCM2-215ENST00000482714 PHKG2P15735 406 aa20.25■□□□□ 0.83
CCM2-215ENST00000482714 NFE2L2Q16236 605 aa20.25■□□□□ 0.83
CCM2-215ENST00000482714 ZNF530Q6P9A1 599 aaPredicted RBP20.25■□□□□ 0.83
CCM2-215ENST00000482714 MARCH10Q8NA82 808 aaPredicted RBP20.24■□□□□ 0.83
CCM2-215ENST00000482714 BCL9O00512 1426 aa20.24■□□□□ 0.83
CCM2-215ENST00000482714 GNAT3A8MTJ3 354 aa20.24■□□□□ 0.83
CCM2-215ENST00000482714 FAM196AQ6ZSG2 479 aa20.24■□□□□ 0.83
CCM2-215ENST00000482714 WNK3Q9BYP7 1800 aa20.23■□□□□ 0.83
CCM2-215ENST00000482714 TMPOP42166 694 aaKnown RBP20.23■□□□□ 0.83
CCM2-215ENST00000482714 DCAF5Q96JK2 942 aa20.23■□□□□ 0.83
CCM2-215ENST00000482714 CCDC146Q8IYE0 955 aa20.22■□□□□ 0.83
CCM2-215ENST00000482714 LMOD3Q0VAK6 560 aa20.21■□□□□ 0.83
CCM2-215ENST00000482714 PKD1L3Q7Z443 1732 aa20.21■□□□□ 0.83
CCM2-215ENST00000482714 APAF1O14727 1248 aa20.2■□□□□ 0.82
CCM2-215ENST00000482714 RIPK4P57078 832 aa20.2■□□□□ 0.82
CCM2-215ENST00000482714 RTF1Q92541 710 aaKnown RBP20.2■□□□□ 0.82
CCM2-215ENST00000482714 ERVV-2B6SEH9 535 aa20.19■□□□□ 0.82
CCM2-215ENST00000482714 CCDC27Q2M243 656 aa20.18■□□□□ 0.82
CCM2-215ENST00000482714 UPF1Q92900 1129 aaKnown RBP eCLIP20.18■□□□□ 0.82
CCM2-215ENST00000482714 LRRC37A3O60309 1634 aa20.18■□□□□ 0.82
CCM2-215ENST00000482714 MAP3K5Q99683 1374 aa20.17■□□□□ 0.82
CCM2-215ENST00000482714 RNMTO43148 476 aaKnown RBP20.15■□□□□ 0.82
CCM2-215ENST00000482714 MPRIPQ6WCQ1 1025 aa20.15■□□□□ 0.82
CCM2-215ENST00000482714 IL17REQ8NFR9 667 aa20.15■□□□□ 0.82
CCM2-215ENST00000482714 NEUROD2Q15784 382 aa20.13■□□□□ 0.81
CCM2-215ENST00000482714 CEMIPQ8WUJ3 1361 aa20.13■□□□□ 0.81
CCM2-215ENST00000482714 CALD1Q05682 793 aaKnown RBP20.12■□□□□ 0.81
CCM2-215ENST00000482714 CCDC125Q86Z20 511 aa20.12■□□□□ 0.81
CCM2-215ENST00000482714 LGR6Q9HBX8 967 aa20.12■□□□□ 0.81
CCM2-215ENST00000482714 TRIM35Q9UPQ4 493 aa20.12■□□□□ 0.81
CCM2-215ENST00000482714 BRWD3Q6RI45 1802 aa20.12■□□□□ 0.81
CCM2-215ENST00000482714 BCL11BQ9C0K0 894 aaPredicted RBP20.11■□□□□ 0.81
CCM2-215ENST00000482714 BABAM1Q9NWV8 329 aa20.11■□□□□ 0.81
CCM2-215ENST00000482714 RRP7AQ9Y3A4 280 aaKnown RBP20.11■□□□□ 0.81
CCM2-215ENST00000482714 SHANK3Q9BYB0 1731 aa20.11■□□□□ 0.81
CCM2-215ENST00000482714 CABP4P57796 275 aa20.11■□□□□ 0.81
CCM2-215ENST00000482714 TEFQ10587 303 aa20.11■□□□□ 0.81
CCM2-215ENST00000482714 PRIM1P49642 420 aaKnown RBP20.1■□□□□ 0.81
CCM2-215ENST00000482714 FAM182BQ5T319 152 aa20.1■□□□□ 0.81
CCM2-215ENST00000482714 SLC52A2Q9HAB3 445 aa20.1■□□□□ 0.81
CCM2-215ENST00000482714 EP400Q96L91 3159 aa20.1■□□□□ 0.81
CCM2-215ENST00000482714 TAF7Q15545 349 aaPredicted RBP20.09■□□□□ 0.81
CCM2-215ENST00000482714 WDR63Q8IWG1 891 aa20.09■□□□□ 0.81
CCM2-215ENST00000482714 WWC1Q8IX03 1113 aa20.09■□□□□ 0.81
CCM2-215ENST00000482714 NFATC2IPQ8NCF5 419 aa20.09■□□□□ 0.81
CCM2-215ENST00000482714 TMOD3Q9NYL9 352 aa20.09■□□□□ 0.81
CCM2-215ENST00000482714 KDM6AO15550 1401 aaPredicted RBP20.09■□□□□ 0.81
CCM2-215ENST00000482714 MCM10Q7L590 875 aa20.08■□□□□ 0.81
CCM2-215ENST00000482714 DCTN1Q14203 1278 aa20.06■□□□□ 0.8
CCM2-215ENST00000482714 PIGBQ92521 554 aa20.06■□□□□ 0.8
CCM2-215ENST00000482714 ACSBG1Q96GR2 724 aa20.06■□□□□ 0.8
CCM2-215ENST00000482714 KAT6BQ8WYB5 2073 aa20.06■□□□□ 0.8
CCM2-215ENST00000482714 ADAMTS7Q9UKP4 1686 aa20.06■□□□□ 0.8
CCM2-215ENST00000482714 IL16Q14005 1332 aa20.05■□□□□ 0.8
CCM2-215ENST00000482714 HMGB2P26583 209 aaKnown RBP20.05■□□□□ 0.8
CCM2-215ENST00000482714 SYTL4Q96C24 671 aaPredicted RBP20.05■□□□□ 0.8
CCM2-215ENST00000482714 KCNQ2O43526 872 aa20.05■□□□□ 0.8
CCM2-215ENST00000482714 TRIM37O94972 964 aa20.05■□□□□ 0.8
CCM2-215ENST00000482714 SMARCC1Q92922 1105 aaPredicted RBP20.05■□□□□ 0.8
CCM2-215ENST00000482714 DLG5Q8TDM6 1919 aa20.04■□□□□ 0.8
CCM2-215ENST00000482714 CFAP44Q96MT7 982 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms