RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 BCAR3O75815 825 aa13.39□□□□□ -0.27
APTX-225ENST00000482687 HAP1P54257 671 aaPredicted RBP13.39□□□□□ -0.27
APTX-225ENST00000482687 EXOSC9Q06265 439 aaKnown RBP13.38□□□□□ -0.27
APTX-225ENST00000482687 PIP4K2BP78356 416 aa13.38□□□□□ -0.27
APTX-225ENST00000482687 IL16Q14005 1332 aa13.37□□□□□ -0.27
APTX-225ENST00000482687 EIF5BO60841 1220 aaKnown RBP13.36□□□□□ -0.27
APTX-225ENST00000482687 LMOD3Q0VAK6 560 aa13.36□□□□□ -0.27
APTX-225ENST00000482687 C20orf194Q5TEA3 1177 aa13.36□□□□□ -0.27
APTX-225ENST00000482687 CSB-PGBD3P0DP91 1061 aa13.36□□□□□ -0.27
APTX-225ENST00000482687 BCL2L13Q9BXK5 485 aa13.36□□□□□ -0.27
APTX-225ENST00000482687 NLRP2Q9NX02 1062 aa13.35□□□□□ -0.27
APTX-225ENST00000482687 ERBB3P21860 1342 aa13.34□□□□□ -0.27
APTX-225ENST00000482687 EXOC6Q8TAG9 804 aa13.34□□□□□ -0.27
APTX-225ENST00000482687 PHLPP1O60346 1717 aa13.34□□□□□ -0.27
APTX-225ENST00000482687 GAS2L2Q8NHY3 880 aa13.33□□□□□ -0.27
APTX-225ENST00000482687 PRDM11Q9NQV5 511 aa13.33□□□□□ -0.27
APTX-225ENST00000482687 MBIPQ9NS73 344 aa13.33□□□□□ -0.27
APTX-225ENST00000482687 CAMTA1Q9Y6Y1 1673 aa13.33□□□□□ -0.28
APTX-225ENST00000482687 RARSP54136 660 aaKnown RBP13.33□□□□□ -0.28
APTX-225ENST00000482687 CALD1Q05682 793 aaKnown RBP13.33□□□□□ -0.28
APTX-225ENST00000482687 GLIPR1L2Q4G1C9 344 aa13.33□□□□□ -0.28
APTX-225ENST00000482687 RTF1Q92541 710 aaKnown RBP13.33□□□□□ -0.28
APTX-225ENST00000482687 CRBNQ96SW2 442 aa13.33□□□□□ -0.28
APTX-225ENST00000482687 IFT57Q9NWB7 429 aa13.33□□□□□ -0.28
APTX-225ENST00000482687 MIS18AQ9NYP9 233 aa13.33□□□□□ -0.28
APTX-225ENST00000482687 CPDO75976 1380 aa13.32□□□□□ -0.28
APTX-225ENST00000482687 AHDC1Q5TGY3 1603 aaPredicted RBP13.32□□□□□ -0.28
APTX-225ENST00000482687 ELL2O00472 640 aaPredicted RBP13.32□□□□□ -0.28
APTX-225ENST00000482687 ZNF853P0CG23 659 aa13.32□□□□□ -0.28
APTX-225ENST00000482687 GNAI1P63096 354 aa13.32□□□□□ -0.28
APTX-225ENST00000482687 FAM43AQ8N2R8 423 aa13.32□□□□□ -0.28
APTX-225ENST00000482687 FRAT1Q92837 279 aaPredicted RBP13.32□□□□□ -0.28
APTX-225ENST00000482687 GSE1Q14687 1217 aa13.31□□□□□ -0.28
APTX-225ENST00000482687 LMO7Q8WWI1 1683 aa13.31□□□□□ -0.28
APTX-225ENST00000482687 FAM208AQ9UK61 1670 aaKnown RBP13.31□□□□□ -0.28
APTX-225ENST00000482687 GNAT3A8MTJ3 354 aa13.31□□□□□ -0.28
APTX-225ENST00000482687 UBAP1LF5GYI3 381 aa13.31□□□□□ -0.28
APTX-225ENST00000482687 TSPYL6Q8N831 410 aa13.31□□□□□ -0.28
APTX-225ENST00000482687 CFAP44Q96MT7 982 aa13.31□□□□□ -0.28
APTX-225ENST00000482687 VIRMAQ69YN4 1812 aaKnown RBP13.31□□□□□ -0.28
APTX-225ENST00000482687 CANXP27824 592 aaKnown RBP13.3□□□□□ -0.28
APTX-225ENST00000482687 ZNF530Q6P9A1 599 aaPredicted RBP13.3□□□□□ -0.28
APTX-225ENST00000482687 BRPF3Q9ULD4 1205 aa13.3□□□□□ -0.28
APTX-225ENST00000482687 TNNQ9UQP3 1299 aa13.3□□□□□ -0.28
APTX-225ENST00000482687 CRB1P82279 1406 aa13.3□□□□□ -0.28
APTX-225ENST00000482687 MAP3K5Q99683 1374 aa13.3□□□□□ -0.28
APTX-225ENST00000482687 TCERG1O14776 1098 aaKnown RBP13.29□□□□□ -0.28
APTX-225ENST00000482687 TOM1O60784 492 aa13.29□□□□□ -0.28
APTX-225ENST00000482687 NCAPD2Q15021 1401 aa13.29□□□□□ -0.28
APTX-225ENST00000482687 KRT24Q2M2I5 525 aa13.29□□□□□ -0.28
APTX-225ENST00000482687 PLEKHO1Q53GL0 409 aaPredicted RBP13.29□□□□□ -0.28
APTX-225ENST00000482687 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.29□□□□□ -0.28
APTX-225ENST00000482687 IL17REQ8NFR9 667 aa13.29□□□□□ -0.28
APTX-225ENST00000482687 STRN4Q9NRL3 753 aa13.29□□□□□ -0.28
APTX-225ENST00000482687 C8orf58Q8NAV2 365 aa13.29□□□□□ -0.28
APTX-225ENST00000482687 SSH1Q8WYL5 1049 aa13.28□□□□□ -0.28
APTX-225ENST00000482687 LGR6Q9HBX8 967 aa13.28□□□□□ -0.28
APTX-225ENST00000482687 SMC4Q9NTJ3 1288 aa13.28□□□□□ -0.28
APTX-225ENST00000482687 COL16A1Q07092 1604 aaPredicted RBP13.28□□□□□ -0.28
APTX-225ENST00000482687 ABCC6O95255 1503 aa13.28□□□□□ -0.28
APTX-225ENST00000482687 LRRC37A3O60309 1634 aa13.27□□□□□ -0.28
APTX-225ENST00000482687 MS4A1P11836 297 aa13.27□□□□□ -0.28
APTX-225ENST00000482687 MPRIPQ6WCQ1 1025 aa13.27□□□□□ -0.28
APTX-225ENST00000482687 MEGF6O75095 1541 aa13.27□□□□□ -0.29
APTX-225ENST00000482687 CHL1O00533 1208 aa13.27□□□□□ -0.29
APTX-225ENST00000482687 EVA1CP58658 441 aa13.27□□□□□ -0.29
APTX-225ENST00000482687 TOM1L2Q6ZVM7 507 aa13.27□□□□□ -0.29
APTX-225ENST00000482687 PANK1Q8TE04 598 aa13.27□□□□□ -0.29
APTX-225ENST00000482687 RAPGEF4Q8WZA2 1011 aa13.27□□□□□ -0.29
APTX-225ENST00000482687 COL5A2P05997 1499 aaPredicted RBP13.26□□□□□ -0.29
APTX-225ENST00000482687 HTATSF1O43719 755 aaKnown RBP13.26□□□□□ -0.29
APTX-225ENST00000482687 VAMP4O75379 141 aa13.26□□□□□ -0.29
APTX-225ENST00000482687 TATP17735 454 aaPredicted RBP13.26□□□□□ -0.29
APTX-225ENST00000482687 TWISTNBQ3B726 338 aaPredicted RBP13.26□□□□□ -0.29
APTX-225ENST00000482687 DDRGK1Q96HY6 314 aa13.26□□□□□ -0.29
APTX-225ENST00000482687 TSPYL4Q9UJ04 414 aa13.26□□□□□ -0.29
APTX-225ENST00000482687 COL22A1Q8NFW1 1626 aaPredicted RBP13.26□□□□□ -0.29
APTX-225ENST00000482687 NUTM2BA6NNL0 878 aaPredicted RBP13.25□□□□□ -0.29
APTX-225ENST00000482687 NUTM2EB1AL46 878 aaPredicted RBP13.25□□□□□ -0.29
APTX-225ENST00000482687 AMOTQ4VCS5 1084 aa13.25□□□□□ -0.29
APTX-225ENST00000482687 LARP1Q6PKG0 1096 aaKnown RBP13.25□□□□□ -0.29
APTX-225ENST00000482687 NUTM2AQ8IVF1 878 aaPredicted RBP13.25□□□□□ -0.29
APTX-225ENST00000482687 WDR17Q8IZU2 1322 aa13.25□□□□□ -0.29
APTX-225ENST00000482687 ADAMTS2O95450 1211 aa13.25□□□□□ -0.29
APTX-225ENST00000482687 CT47B1P0C2W7 299 aaPredicted RBP13.25□□□□□ -0.29
APTX-225ENST00000482687 AKAP4Q5JQC9 854 aa13.25□□□□□ -0.29
APTX-225ENST00000482687 C1orf141Q5JVX7 400 aa13.25□□□□□ -0.29
APTX-225ENST00000482687 CLUAP1Q96AJ1 413 aa13.25□□□□□ -0.29
APTX-225ENST00000482687 BTG4Q9NY30 223 aa13.25□□□□□ -0.29
APTX-225ENST00000482687 NOB1Q9ULX3 412 aaKnown RBP13.24□□□□□ -0.29
APTX-225ENST00000482687 COG6Q9Y2V7 657 aa13.23□□□□□ -0.29
APTX-225ENST00000482687 COL14A1Q05707 1796 aaKnown RBP13.23□□□□□ -0.29
APTX-225ENST00000482687 RLBP1P12271 317 aa13.23□□□□□ -0.29
APTX-225ENST00000482687 TAF7Q15545 349 aaPredicted RBP13.23□□□□□ -0.29
APTX-225ENST00000482687 RNMTO43148 476 aaKnown RBP13.22□□□□□ -0.29
APTX-225ENST00000482687 ZKSCAN2Q63HK3 967 aa13.21□□□□□ -0.29
APTX-225ENST00000482687 MRPL50Q8N5N7 158 aaKnown RBP13.21□□□□□ -0.29
APTX-225ENST00000482687 CERKQ8TCT0 537 aa13.21□□□□□ -0.29
APTX-225ENST00000482687 PKD1L3Q7Z443 1732 aa13.21□□□□□ -0.29
APTX-225ENST00000482687 PARP4Q9UKK3 1724 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms