RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 MSL1Q68DK7 614 aa21.41■■□□□ 1.02
HDAC6-224ENST00000481929 COL23A1Q86Y22 540 aaPredicted RBP21.41■■□□□ 1.02
HDAC6-224ENST00000481929 ZNF526Q8TF50 670 aaPredicted RBP21.41■■□□□ 1.02
HDAC6-224ENST00000481929 SBNO2Q9Y2G9 1366 aa21.4■■□□□ 1.02
HDAC6-224ENST00000481929 CD2APQ9Y5K6 639 aa21.4■■□□□ 1.02
HDAC6-224ENST00000481929 ROCK2O75116 1388 aaKnown RBP21.39■■□□□ 1.02
HDAC6-224ENST00000481929 FAM208AQ9UK61 1670 aaKnown RBP21.39■■□□□ 1.01
HDAC6-224ENST00000481929 LTV1Q96GA3 475 aaPredicted RBP21.38■■□□□ 1.01
HDAC6-224ENST00000481929 USP47Q96K76 1375 aa21.37■■□□□ 1.01
HDAC6-224ENST00000481929 IP6K1Q92551 441 aa21.37■■□□□ 1.01
HDAC6-224ENST00000481929 L3MBTL2Q969R5 705 aa21.37■■□□□ 1.01
HDAC6-224ENST00000481929 HDGFL2Q7Z4V5 671 aaPredicted RBP21.36■■□□□ 1.01
HDAC6-224ENST00000481929 CD163L1Q9NR16 1453 aa21.36■■□□□ 1.01
HDAC6-224ENST00000481929 EDC4Q6P2E9 1401 aaKnown RBP21.35■■□□□ 1.01
HDAC6-224ENST00000481929 ZCRB1Q8TBF4 217 aaKnown RBP21.34■■□□□ 1.01
HDAC6-224ENST00000481929 TMC1Q8TDI8 760 aa21.34■■□□□ 1.01
HDAC6-224ENST00000481929 FLAD1Q8NFF5 587 aa21.33■■□□□ 1.01
HDAC6-224ENST00000481929 HMGB2P26583 209 aaKnown RBP21.31■■□□□ 1
HDAC6-224ENST00000481929 C5P01031 1676 aa21.3■■□□□ 1
HDAC6-224ENST00000481929 MEGF6O75095 1541 aa21.29■■□□□ 1
HDAC6-224ENST00000481929 TERF2IPQ9NYB0 399 aa21.29■■□□□ 1
HDAC6-224ENST00000481929 IGSF1Q8N6C5 1336 aa21.29■■□□□ 1
HDAC6-224ENST00000481929 KIF3CO14782 793 aa21.28■■□□□ 1
HDAC6-224ENST00000481929 SLC12A5Q9H2X9 1139 aa21.28■■□□□ 1
HDAC6-224ENST00000481929 A0A1W2PP64 1363 aa21.27■■□□□ 1
HDAC6-224ENST00000481929 APLP1P51693 650 aa21.27■■□□□ 1
HDAC6-224ENST00000481929 WWC3Q9ULE0 1092 aa21.27■■□□□ 1
HDAC6-224ENST00000481929 HOXC9P31274 260 aa21.26■□□□□ 0.99
HDAC6-224ENST00000481929 AMPHP49418 695 aa21.26■□□□□ 0.99
HDAC6-224ENST00000481929 MAP3K19Q56UN5 1328 aa21.26■□□□□ 0.99
HDAC6-224ENST00000481929 PALLDQ8WX93 1383 aa21.24■□□□□ 0.99
HDAC6-224ENST00000481929 AK7Q96M32 723 aa21.24■□□□□ 0.99
HDAC6-224ENST00000481929 CGNL1Q0VF96 1302 aa21.24■□□□□ 0.99
HDAC6-224ENST00000481929 RGPD2P0DJD1 1756 aa21.23■□□□□ 0.99
HDAC6-224ENST00000481929 COG3Q96JB2 828 aa21.23■□□□□ 0.99
HDAC6-224ENST00000481929 TAF1LQ8IZX4 1826 aa21.22■□□□□ 0.99
HDAC6-224ENST00000481929 RAPGEF4Q8WZA2 1011 aa21.22■□□□□ 0.99
HDAC6-224ENST00000481929 NSD3Q9BZ95 1437 aa21.21■□□□□ 0.99
HDAC6-224ENST00000481929 C4BP0C0L5 1744 aa21.21■□□□□ 0.99
HDAC6-224ENST00000481929 RTL1A6NKG5 1358 aa21.2■□□□□ 0.98
HDAC6-224ENST00000481929 PHF14O94880 888 aa21.19■□□□□ 0.98
HDAC6-224ENST00000481929 NBPF6Q5VWK0 638 aa21.19■□□□□ 0.98
HDAC6-224ENST00000481929 MPRIPQ6WCQ1 1025 aa21.19■□□□□ 0.98
HDAC6-224ENST00000481929 NBPF4Q96M43 638 aa21.19■□□□□ 0.98
HDAC6-224ENST00000481929 PCDH11XQ9BZA7 1347 aa21.19■□□□□ 0.98
HDAC6-224ENST00000481929 PCDH11YQ9BZA8 1340 aa21.19■□□□□ 0.98
HDAC6-224ENST00000481929 CICQ96RK0 1608 aaPredicted RBP21.18■□□□□ 0.98
HDAC6-224ENST00000481929 TOMM70O94826 608 aa21.18■□□□□ 0.98
HDAC6-224ENST00000481929 TATP17735 454 aaPredicted RBP21.18■□□□□ 0.98
HDAC6-224ENST00000481929 USHBP1Q8N6Y0 703 aa21.18■□□□□ 0.98
HDAC6-224ENST00000481929 DNAJC5GQ8N7S2 189 aa21.18■□□□□ 0.98
HDAC6-224ENST00000481929 SMARCC1Q92922 1105 aaPredicted RBP21.18■□□□□ 0.98
HDAC6-224ENST00000481929 SIN3AQ96ST3 1273 aa21.18■□□□□ 0.98
HDAC6-224ENST00000481929 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.17■□□□□ 0.98
HDAC6-224ENST00000481929 FBLN1P23142 703 aa21.17■□□□□ 0.98
HDAC6-224ENST00000481929 AMIGO3Q86WK7 504 aa21.17■□□□□ 0.98
HDAC6-224ENST00000481929 CARD11Q9BXL7 1154 aa21.17■□□□□ 0.98
HDAC6-224ENST00000481929 SMG6Q86US8 1419 aaKnown RBP21.17■□□□□ 0.98
HDAC6-224ENST00000481929 TOGARAM1Q9Y4F4 1720 aa21.17■□□□□ 0.98
HDAC6-224ENST00000481929 PUS7Q96PZ0 661 aaKnown RBP21.16■□□□□ 0.98
HDAC6-224ENST00000481929 UBR3Q6ZT12 1888 aa21.15■□□□□ 0.98
HDAC6-224ENST00000481929 SSFA2P28290 1259 aa21.15■□□□□ 0.98
HDAC6-224ENST00000481929 NEUROD1Q13562 356 aa21.15■□□□□ 0.98
HDAC6-224ENST00000481929 SMIM5Q71RC9 77 aa21.14■□□□□ 0.97
HDAC6-224ENST00000481929 RRS1Q15050 365 aaKnown RBP21.12■□□□□ 0.97
HDAC6-224ENST00000481929 PXDNLA1KZ92 1463 aa21.1■□□□□ 0.97
HDAC6-224ENST00000481929 CYP27B1O15528 508 aa21.1■□□□□ 0.97
HDAC6-224ENST00000481929 WDR90Q96KV7 1748 aa21.09■□□□□ 0.97
HDAC6-224ENST00000481929 ITGB4P16144 1822 aa21.09■□□□□ 0.97
HDAC6-224ENST00000481929 NMRK2Q9NPI5 230 aa21.09■□□□□ 0.97
HDAC6-224ENST00000481929 BCS1LQ9Y276 419 aa21.09■□□□□ 0.97
HDAC6-224ENST00000481929 MMP10P09238 476 aa21.08■□□□□ 0.97
HDAC6-224ENST00000481929 LINC00116Q8NCU8 138 aa21.08■□□□□ 0.97
HDAC6-224ENST00000481929 PIGBQ92521 554 aa21.08■□□□□ 0.97
HDAC6-224ENST00000481929 LOC102724428A0A0B4J2F2 783 aa21.07■□□□□ 0.96
HDAC6-224ENST00000481929 GNPATO15228 680 aa21.07■□□□□ 0.96
HDAC6-224ENST00000481929 SIK1P57059 783 aa21.07■□□□□ 0.96
HDAC6-224ENST00000481929 TGFB2P61812 414 aa21.07■□□□□ 0.96
HDAC6-224ENST00000481929 COL13A1Q5TAT6 717 aaPredicted RBP21.07■□□□□ 0.96
HDAC6-224ENST00000481929 C16orf71Q8IYS4 520 aaPredicted RBP21.07■□□□□ 0.96
HDAC6-224ENST00000481929 RBM46Q8TBY0 533 aaKnown RBP21.07■□□□□ 0.96
HDAC6-224ENST00000481929 KLRG1Q96E93 195 aa21.07■□□□□ 0.96
HDAC6-224ENST00000481929 CAPN15O75808 1086 aa21.06■□□□□ 0.96
HDAC6-224ENST00000481929 ARHGAP27Q6ZUM4 889 aa21.06■□□□□ 0.96
HDAC6-224ENST00000481929 INSRP06213 1382 aa21.06■□□□□ 0.96
HDAC6-224ENST00000481929 KIF13BQ9NQT8 1826 aa21.05■□□□□ 0.96
HDAC6-224ENST00000481929 MAP2P11137 1827 aaKnown RBP21.04■□□□□ 0.96
HDAC6-224ENST00000481929 HSP90AB2PQ58FF8 381 aa21.04■□□□□ 0.96
HDAC6-224ENST00000481929 JMYQ8N9B5 988 aa21.04■□□□□ 0.96
HDAC6-224ENST00000481929 KIAA1551Q9HCM1 1747 aa21.04■□□□□ 0.96
HDAC6-224ENST00000481929 N4BP2Q86UW6 1770 aaPredicted RBP21.03■□□□□ 0.96
HDAC6-224ENST00000481929 FLT4P35916 1363 aa21.03■□□□□ 0.96
HDAC6-224ENST00000481929 A0A0G2JLW4 131 aa21.03■□□□□ 0.96
HDAC6-224ENST00000481929 HTRA3P83110 453 aa21.03■□□□□ 0.96
HDAC6-224ENST00000481929 GGNBP2Q9H3C7 697 aa21.03■□□□□ 0.96
HDAC6-224ENST00000481929 C10orf71Q711Q0 1435 aa21.03■□□□□ 0.96
HDAC6-224ENST00000481929 PLEKHG2Q9H7P9 1386 aa21.02■□□□□ 0.96
HDAC6-224ENST00000481929 PKD1L3Q7Z443 1732 aa21.02■□□□□ 0.96
HDAC6-224ENST00000481929 FSTL1Q12841 308 aa21.02■□□□□ 0.96
HDAC6-224ENST00000481929 FYB1O15117 783 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms