RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 MEGF6O75095 1541 aa27.55■■■□□ 2
VPS16-207ENST00000481812 POTEAQ6S8J7 498 aa27.54■■■□□ 2
VPS16-207ENST00000481812 PKD1L3Q7Z443 1732 aa27.53■■■□□ 2
VPS16-207ENST00000481812 RXRBP28702 533 aa27.53■■■□□ 2
VPS16-207ENST00000481812 FAM98CQ17RN3 349 aaKnown RBP27.53■■■□□ 2
VPS16-207ENST00000481812 PLEKHF1Q96S99 279 aa27.53■■■□□ 2
VPS16-207ENST00000481812 PRKAR2BP31323 418 aa27.52■■■□□ 2
VPS16-207ENST00000481812 AMOTQ4VCS5 1084 aa27.51■■□□□ 1.99
VPS16-207ENST00000481812 FAM9BQ8IZU0 186 aa27.5■■□□□ 1.99
VPS16-207ENST00000481812 NEFMP07197 916 aa27.49■■□□□ 1.99
VPS16-207ENST00000481812 PLEKHO1Q53GL0 409 aaPredicted RBP27.49■■□□□ 1.99
VPS16-207ENST00000481812 RUNDC1Q96C34 613 aa27.49■■□□□ 1.99
VPS16-207ENST00000481812 EXOC5O00471 708 aa27.48■■□□□ 1.99
VPS16-207ENST00000481812 ZCRB1Q8TBF4 217 aaKnown RBP27.48■■□□□ 1.99
VPS16-207ENST00000481812 SPG7Q9UQ90 795 aa27.48■■□□□ 1.99
VPS16-207ENST00000481812 LRRC37A3O60309 1634 aa27.48■■□□□ 1.99
VPS16-207ENST00000481812 TNS2Q63HR2 1409 aa27.47■■□□□ 1.99
VPS16-207ENST00000481812 DDB1Q16531 1140 aa27.46■■□□□ 1.99
VPS16-207ENST00000481812 SHANK3Q9BYB0 1731 aa27.46■■□□□ 1.99
VPS16-207ENST00000481812 SEPT12Q8IYM1 358 aa27.45■■□□□ 1.98
VPS16-207ENST00000481812 PHACTR3Q96KR7 559 aa27.45■■□□□ 1.98
VPS16-207ENST00000481812 MAPK8IP3Q9UPT6 1336 aa27.44■■□□□ 1.98
VPS16-207ENST00000481812 GAS2L2Q8NHY3 880 aa27.44■■□□□ 1.98
VPS16-207ENST00000481812 PCDH11XQ9BZA7 1347 aa27.42■■□□□ 1.98
VPS16-207ENST00000481812 PCDH11YQ9BZA8 1340 aa27.42■■□□□ 1.98
VPS16-207ENST00000481812 MTHFSDQ2M296 383 aaKnown RBP27.41■■□□□ 1.98
VPS16-207ENST00000481812 CCDC146Q8IYE0 955 aa27.41■■□□□ 1.98
VPS16-207ENST00000481812 BRWD3Q6RI45 1802 aa27.41■■□□□ 1.98
VPS16-207ENST00000481812 A0A0G2JS52 829 aa27.4■■□□□ 1.98
VPS16-207ENST00000481812 MYT1Q01538 1121 aa27.4■■□□□ 1.98
VPS16-207ENST00000481812 DLG5Q8TDM6 1919 aa27.38■■□□□ 1.97
VPS16-207ENST00000481812 NFE2L2Q16236 605 aa27.38■■□□□ 1.97
VPS16-207ENST00000481812 NCBP3Q53F19 620 aaKnown RBP27.38■■□□□ 1.97
VPS16-207ENST00000481812 ZNF530Q6P9A1 599 aaPredicted RBP27.38■■□□□ 1.97
VPS16-207ENST00000481812 IFNL2Q8IZJ0 200 aa27.38■■□□□ 1.97
VPS16-207ENST00000481812 RGS12O14924 1447 aa27.38■■□□□ 1.97
VPS16-207ENST00000481812 CYP27B1O15528 508 aa27.37■■□□□ 1.97
VPS16-207ENST00000481812 PDE3BQ13370 1112 aa27.37■■□□□ 1.97
VPS16-207ENST00000481812 AKAP4Q5JQC9 854 aa27.37■■□□□ 1.97
VPS16-207ENST00000481812 PHKG2P15735 406 aa27.36■■□□□ 1.97
VPS16-207ENST00000481812 TMPOP42166 694 aaKnown RBP27.36■■□□□ 1.97
VPS16-207ENST00000481812 C1orf141Q5JVX7 400 aa27.36■■□□□ 1.97
VPS16-207ENST00000481812 HSP90AB1P08238 724 aaKnown RBP27.35■■□□□ 1.97
VPS16-207ENST00000481812 NKX1-1Q15270 411 aaPredicted RBP27.35■■□□□ 1.97
VPS16-207ENST00000481812 NGEFQ8N5V2 710 aa27.35■■□□□ 1.97
VPS16-207ENST00000481812 APAF1O14727 1248 aa27.34■■□□□ 1.97
VPS16-207ENST00000481812 HTATSF1O43719 755 aaKnown RBP27.34■■□□□ 1.97
VPS16-207ENST00000481812 MARCH10Q8NA82 808 aaPredicted RBP27.34■■□□□ 1.97
VPS16-207ENST00000481812 DDX54Q8TDD1 881 aaKnown RBP27.33■■□□□ 1.97
VPS16-207ENST00000481812 BCL9O00512 1426 aa27.33■■□□□ 1.96
VPS16-207ENST00000481812 GNAT3A8MTJ3 354 aa27.32■■□□□ 1.96
VPS16-207ENST00000481812 KRT27Q7Z3Y8 459 aa27.32■■□□□ 1.96
VPS16-207ENST00000481812 ADAMTS7Q9UKP4 1686 aa27.32■■□□□ 1.96
VPS16-207ENST00000481812 MAP3K5Q99683 1374 aa27.32■■□□□ 1.96
VPS16-207ENST00000481812 VIRMAQ69YN4 1812 aaKnown RBP27.32■■□□□ 1.96
VPS16-207ENST00000481812 SCN11AQ9UI33 1791 aa27.3■■□□□ 1.96
VPS16-207ENST00000481812 RIPK4P57078 832 aa27.3■■□□□ 1.96
VPS16-207ENST00000481812 LMOD3Q0VAK6 560 aa27.29■■□□□ 1.96
VPS16-207ENST00000481812 DCAF5Q96JK2 942 aa27.29■■□□□ 1.96
VPS16-207ENST00000481812 CCDC27Q2M243 656 aa27.27■■□□□ 1.96
VPS16-207ENST00000481812 RTF1Q92541 710 aaKnown RBP27.26■■□□□ 1.95
VPS16-207ENST00000481812 RRP7AQ9Y3A4 280 aaKnown RBP27.25■■□□□ 1.95
VPS16-207ENST00000481812 KDM6AO15550 1401 aaPredicted RBP27.24■■□□□ 1.95
VPS16-207ENST00000481812 CEMIPQ8WUJ3 1361 aa27.24■■□□□ 1.95
VPS16-207ENST00000481812 RNMTO43148 476 aaKnown RBP27.24■■□□□ 1.95
VPS16-207ENST00000481812 NEUROD2Q15784 382 aa27.24■■□□□ 1.95
VPS16-207ENST00000481812 FAM196AQ6ZSG2 479 aa27.24■■□□□ 1.95
VPS16-207ENST00000481812 TRIM35Q9UPQ4 493 aa27.24■■□□□ 1.95
VPS16-207ENST00000481812 SBF2Q86WG5 1849 aa27.23■■□□□ 1.95
VPS16-207ENST00000481812 ERVV-2B6SEH9 535 aa27.23■■□□□ 1.95
VPS16-207ENST00000481812 MPRIPQ6WCQ1 1025 aa27.23■■□□□ 1.95
VPS16-207ENST00000481812 IL17REQ8NFR9 667 aa27.23■■□□□ 1.95
VPS16-207ENST00000481812 KAT6BQ8WYB5 2073 aa27.23■■□□□ 1.95
VPS16-207ENST00000481812 TOGARAM1Q9Y4F4 1720 aa27.22■■□□□ 1.95
VPS16-207ENST00000481812 LGR6Q9HBX8 967 aa27.21■■□□□ 1.95
VPS16-207ENST00000481812 DOT1LQ8TEK3 1739 aa27.21■■□□□ 1.95
VPS16-207ENST00000481812 ITGB4P16144 1822 aa27.2■■□□□ 1.95
VPS16-207ENST00000481812 MRC1P22897 1456 aa27.19■■□□□ 1.94
VPS16-207ENST00000481812 SIPA1L3O60292 1781 aaPredicted RBP27.18■■□□□ 1.94
VPS16-207ENST00000481812 WWC1Q8IX03 1113 aa27.18■■□□□ 1.94
VPS16-207ENST00000481812 NHSQ6T4R5 1651 aa27.17■■□□□ 1.94
VPS16-207ENST00000481812 MCM10Q7L590 875 aa27.17■■□□□ 1.94
VPS16-207ENST00000481812 CALD1Q05682 793 aaKnown RBP27.16■■□□□ 1.94
VPS16-207ENST00000481812 DCTN1Q14203 1278 aa27.16■■□□□ 1.94
VPS16-207ENST00000481812 FAM182BQ5T319 152 aa27.16■■□□□ 1.94
VPS16-207ENST00000481812 SLC52A2Q9HAB3 445 aa27.16■■□□□ 1.94
VPS16-207ENST00000481812 HNRNPUQ00839 825 aaKnown RBP eCLIP27.15■■□□□ 1.94
VPS16-207ENST00000481812 CABP4P57796 275 aa27.14■■□□□ 1.94
VPS16-207ENST00000481812 TEFQ10587 303 aa27.14■■□□□ 1.94
VPS16-207ENST00000481812 WDR63Q8IWG1 891 aa27.14■■□□□ 1.94
VPS16-207ENST00000481812 ZNF521Q96K83 1311 aa27.14■■□□□ 1.93
VPS16-207ENST00000481812 PRIM1P49642 420 aaKnown RBP27.12■■□□□ 1.93
VPS16-207ENST00000481812 IL16Q14005 1332 aa27.12■■□□□ 1.93
VPS16-207ENST00000481812 TAF7Q15545 349 aaPredicted RBP27.11■■□□□ 1.93
VPS16-207ENST00000481812 NFATC2IPQ8NCF5 419 aa27.11■■□□□ 1.93
VPS16-207ENST00000481812 ACSBG1Q96GR2 724 aa27.11■■□□□ 1.93
VPS16-207ENST00000481812 BABAM1Q9NWV8 329 aa27.11■■□□□ 1.93
VPS16-207ENST00000481812 TMOD3Q9NYL9 352 aa27.11■■□□□ 1.93
VPS16-207ENST00000481812 SALL2Q9Y467 1007 aaPredicted RBP27.11■■□□□ 1.93
VPS16-207ENST00000481812 SENP3-EIF4A1A0A087X0R7 540 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms