RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 STK32BQ9NY57 414 aa30.72■■■□□ 2.51
GPCPD1-206ENST00000481690 ANKRD26Q9UPS8 1709 aa30.72■■■□□ 2.51
GPCPD1-206ENST00000481690 CGNL1Q0VF96 1302 aa30.72■■■□□ 2.51
GPCPD1-206ENST00000481690 KIF24Q5T7B8 1368 aa30.71■■■□□ 2.51
GPCPD1-206ENST00000481690 ZCRB1Q8TBF4 217 aaKnown RBP30.71■■■□□ 2.51
GPCPD1-206ENST00000481690 SPON1Q9HCB6 807 aa30.71■■■□□ 2.51
GPCPD1-206ENST00000481690 EMILIN1Q9Y6C2 1016 aa30.71■■■□□ 2.51
GPCPD1-206ENST00000481690 PPM1GO15355 546 aaPredicted RBP30.69■■■□□ 2.5
GPCPD1-206ENST00000481690 RAPGEF4Q8WZA2 1011 aa30.69■■■□□ 2.5
GPCPD1-206ENST00000481690 SYTL4Q96C24 671 aaPredicted RBP30.68■■■□□ 2.5
GPCPD1-206ENST00000481690 PPP1R1BQ9UD71 204 aaPredicted RBP30.67■■■□□ 2.5
GPCPD1-206ENST00000481690 PAPPAQ13219 1627 aa30.65■■■□□ 2.5
GPCPD1-206ENST00000481690 TATP17735 454 aaPredicted RBP30.65■■■□□ 2.5
GPCPD1-206ENST00000481690 SLC15A2Q16348 729 aa30.65■■■□□ 2.5
GPCPD1-206ENST00000481690 PDGFDQ9GZP0 370 aaPredicted RBP30.65■■■□□ 2.5
GPCPD1-206ENST00000481690 PRIM1P49642 420 aaKnown RBP30.62■■■□□ 2.49
GPCPD1-206ENST00000481690 ZBTB7AO95365 584 aa30.61■■■□□ 2.49
GPCPD1-206ENST00000481690 TNNT2P45379 298 aaPredicted RBP30.6■■■□□ 2.49
GPCPD1-206ENST00000481690 PANK3Q9H999 370 aa30.59■■■□□ 2.49
GPCPD1-206ENST00000481690 LY75O60449 1722 aa30.58■■■□□ 2.49
GPCPD1-206ENST00000481690 NSD2O96028 1365 aa30.57■■■□□ 2.48
GPCPD1-206ENST00000481690 PCDH11XQ9BZA7 1347 aa30.57■■■□□ 2.48
GPCPD1-206ENST00000481690 PCDH11YQ9BZA8 1340 aa30.57■■■□□ 2.48
GPCPD1-206ENST00000481690 PKD1L3Q7Z443 1732 aa30.57■■■□□ 2.48
GPCPD1-206ENST00000481690 LRRC4BQ9NT99 713 aa30.57■■■□□ 2.48
GPCPD1-206ENST00000481690 WASHC2AQ641Q2 1341 aa30.56■■■□□ 2.48
GPCPD1-206ENST00000481690 POLKQ9UBT6 870 aa30.55■■■□□ 2.48
GPCPD1-206ENST00000481690 ATF5Q9Y2D1 282 aaPredicted RBP30.55■■■□□ 2.48
GPCPD1-206ENST00000481690 ZNF827Q17R98 1081 aa30.53■■■□□ 2.48
GPCPD1-206ENST00000481690 SLC27A3Q5K4L6 730 aa30.53■■■□□ 2.48
GPCPD1-206ENST00000481690 NCAPD2Q15021 1401 aa30.52■■■□□ 2.48
GPCPD1-206ENST00000481690 KCNQ4P56696 695 aa30.51■■■□□ 2.47
GPCPD1-206ENST00000481690 TUBGCP6Q96RT7 1819 aa30.51■■■□□ 2.47
GPCPD1-206ENST00000481690 QSER1Q2KHR3 1735 aa30.5■■■□□ 2.47
GPCPD1-206ENST00000481690 TOGARAM1Q9Y4F4 1720 aa30.5■■■□□ 2.47
GPCPD1-206ENST00000481690 ITGB4P16144 1822 aa30.5■■■□□ 2.47
GPCPD1-206ENST00000481690 EYA1Q99502 592 aa30.49■■■□□ 2.47
GPCPD1-206ENST00000481690 MTFR1LQ9H019 292 aa30.48■■■□□ 2.47
GPCPD1-206ENST00000481690 CYP27B1O15528 508 aa30.47■■■□□ 2.47
GPCPD1-206ENST00000481690 PTGER2P43116 358 aa30.47■■■□□ 2.47
GPCPD1-206ENST00000481690 AKT1S1Q96B36 256 aa30.46■■■□□ 2.47
GPCPD1-206ENST00000481690 CCNL1Q9UK58 526 aaPredicted RBP30.46■■■□□ 2.47
GPCPD1-206ENST00000481690 EIF4A2Q14240 407 aaKnown RBP30.45■■■□□ 2.47
GPCPD1-206ENST00000481690 SPG7Q9UQ90 795 aa30.44■■■□□ 2.46
GPCPD1-206ENST00000481690 MPRIPQ6WCQ1 1025 aa30.43■■■□□ 2.46
GPCPD1-206ENST00000481690 MORC1Q86VD1 984 aa30.43■■■□□ 2.46
GPCPD1-206ENST00000481690 KNSTRNQ9Y448 316 aa30.43■■■□□ 2.46
GPCPD1-206ENST00000481690 TFCP2L1Q9NZI6 479 aa30.42■■■□□ 2.46
GPCPD1-206ENST00000481690 C5P01031 1676 aa30.42■■■□□ 2.46
GPCPD1-206ENST00000481690 KIF7Q2M1P5 1343 aa30.41■■■□□ 2.46
GPCPD1-206ENST00000481690 PNPLA7Q6ZV29 1317 aa30.39■■■□□ 2.46
GPCPD1-206ENST00000481690 TAF1LQ8IZX4 1826 aa30.38■■■□□ 2.45
GPCPD1-206ENST00000481690 DCAF8L1A6NGE4 600 aa30.38■■■□□ 2.45
GPCPD1-206ENST00000481690 PALLDQ8WX93 1383 aa30.38■■■□□ 2.45
GPCPD1-206ENST00000481690 SGIP1Q9BQI5 828 aa30.37■■■□□ 2.45
GPCPD1-206ENST00000481690 FHDC1Q9C0D6 1143 aaPredicted RBP30.35■■■□□ 2.45
GPCPD1-206ENST00000481690 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.35■■■□□ 2.452e-6■■■□□ 17.2
GPCPD1-206ENST00000481690 IGSF1Q8N6C5 1336 aa30.35■■■□□ 2.45
GPCPD1-206ENST00000481690 NKX1-1Q15270 411 aaPredicted RBP30.34■■■□□ 2.45
GPCPD1-206ENST00000481690 ARXQ96QS3 562 aa30.33■■■□□ 2.45
GPCPD1-206ENST00000481690 IFNL2Q8IZJ0 200 aa30.32■■■□□ 2.44
GPCPD1-206ENST00000481690 SLC16A10Q8TF71 515 aa30.32■■■□□ 2.44
GPCPD1-206ENST00000481690 COL24A1Q17RW2 1714 aa30.31■■■□□ 2.44
GPCPD1-206ENST00000481690 MSH5O43196 834 aa30.31■■■□□ 2.44
GPCPD1-206ENST00000481690 PHKG2P15735 406 aa30.31■■■□□ 2.44
GPCPD1-206ENST00000481690 PIGBQ92521 554 aa30.31■■■□□ 2.44
GPCPD1-206ENST00000481690 SMARCC1Q92922 1105 aaPredicted RBP30.31■■■□□ 2.44
GPCPD1-206ENST00000481690 AMER1Q5JTC6 1135 aaPredicted RBP30.29■■■□□ 2.44
GPCPD1-206ENST00000481690 SYT17Q9BSW7 474 aa30.29■■■□□ 2.44
GPCPD1-206ENST00000481690 TMOD3Q9NYL9 352 aa30.29■■■□□ 2.44
GPCPD1-206ENST00000481690 POLD1P28340 1107 aa30.28■■■□□ 2.44
GPCPD1-206ENST00000481690 PLEKHG2Q9H7P9 1386 aa30.28■■■□□ 2.44
GPCPD1-206ENST00000481690 C4BP0C0L5 1744 aa30.27■■■□□ 2.44
GPCPD1-206ENST00000481690 KLHL34Q8N239 644 aa30.25■■■□□ 2.43
GPCPD1-206ENST00000481690 HMGB2P26583 209 aaKnown RBP30.24■■■□□ 2.43
GPCPD1-206ENST00000481690 PLEKHO1Q53GL0 409 aaPredicted RBP30.24■■■□□ 2.43
GPCPD1-206ENST00000481690 COL23A1Q86Y22 540 aaPredicted RBP30.24■■■□□ 2.43
GPCPD1-206ENST00000481690 AEBP1Q8IUX7 1158 aa30.23■■■□□ 2.43
GPCPD1-206ENST00000481690 YY1P25490 414 aa30.22■■■□□ 2.43
GPCPD1-206ENST00000481690 UBR3Q6ZT12 1888 aa30.21■■■□□ 2.43
GPCPD1-206ENST00000481690 CC2D1BQ5T0F9 858 aaKnown RBP30.21■■■□□ 2.43
GPCPD1-206ENST00000481690 ZNF530Q6P9A1 599 aaPredicted RBP30.21■■■□□ 2.43
GPCPD1-206ENST00000481690 AK7Q96M32 723 aa30.21■■■□□ 2.43
GPCPD1-206ENST00000481690 ASAP1Q9ULH1 1129 aa30.21■■■□□ 2.43
GPCPD1-206ENST00000481690 MAP3K5Q99683 1374 aa30.2■■■□□ 2.43
GPCPD1-206ENST00000481690 SULT6B1Q6IMI4 303 aa30.2■■■□□ 2.43
GPCPD1-206ENST00000481690 LOC102724428A0A0B4J2F2 783 aa30.19■■■□□ 2.42
GPCPD1-206ENST00000481690 SIK1P57059 783 aa30.19■■■□□ 2.42
GPCPD1-206ENST00000481690 AMOTQ4VCS5 1084 aa30.19■■■□□ 2.42
GPCPD1-206ENST00000481690 HSP90AB1P08238 724 aaKnown RBP30.18■■■□□ 2.42
GPCPD1-206ENST00000481690 IL13P35225 146 aa30.18■■■□□ 2.42
GPCPD1-206ENST00000481690 MSL1Q68DK7 614 aa30.18■■■□□ 2.42
GPCPD1-206ENST00000481690 PER1O15534 1290 aaPredicted RBP30.17■■■□□ 2.42
GPCPD1-206ENST00000481690 MTHFSP49914 203 aa30.17■■■□□ 2.42
GPCPD1-206ENST00000481690 CNGB1Q14028 1251 aaPredicted RBP30.17■■■□□ 2.42
GPCPD1-206ENST00000481690 FLAD1Q8NFF5 587 aa30.16■■■□□ 2.42
GPCPD1-206ENST00000481690 DCAF5Q96JK2 942 aa30.16■■■□□ 2.42
GPCPD1-206ENST00000481690 KDM6AO15550 1401 aaPredicted RBP30.15■■■□□ 2.42
GPCPD1-206ENST00000481690 PHF14O94880 888 aa30.15■■■□□ 2.42
GPCPD1-206ENST00000481690 C1orf141Q5JVX7 400 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms