RNA–Protein interactions for RNA: ENST00000480825.6

CSF3R-210, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 2

Gene CSF3R, Length 6,074 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-210ENST00000480825 GPATCH11Q8N954 259 aa13.62□□□□□ -0.23
CSF3R-210ENST00000480825 CCDC97Q96F63 343 aaPredicted RBP13.62□□□□□ -0.23
CSF3R-210ENST00000480825 KRT32Q14532 448 aa13.62□□□□□ -0.23
CSF3R-210ENST00000480825 LUZP1Q86V48 1076 aa13.62□□□□□ -0.23
CSF3R-210ENST00000480825 CECR2Q9BXF3 1484 aa13.62□□□□□ -0.23
CSF3R-210ENST00000480825 GCOM1H8Y6P7 765 aaPredicted RBP13.62□□□□□ -0.23
CSF3R-210ENST00000480825 MYZAPP0CAP1 466 aa13.62□□□□□ -0.23
CSF3R-210ENST00000480825 PPP2R1AP30153 589 aa13.62□□□□□ -0.23
CSF3R-210ENST00000480825 TRERF1Q96PN7 1200 aa13.62□□□□□ -0.23
CSF3R-210ENST00000480825 CEP131Q9UPN4 1083 aa13.62□□□□□ -0.23
CSF3R-210ENST00000480825 CTNNA3Q9UI47 895 aa13.61□□□□□ -0.23
CSF3R-210ENST00000480825 NUTM2GQ5VZR2 741 aa13.61□□□□□ -0.23
CSF3R-210ENST00000480825 STAC3Q96MF2 364 aa13.61□□□□□ -0.23
CSF3R-210ENST00000480825 IPO4Q8TEX9 1081 aaKnown RBP13.61□□□□□ -0.23
CSF3R-210ENST00000480825 UBAC1Q9BSL1 405 aa13.61□□□□□ -0.23
CSF3R-210ENST00000480825 MATR3P43243 847 aaKnown RBP eCLIP13.61□□□□□ -0.23
CSF3R-210ENST00000480825 PLEKHO1Q53GL0 409 aaPredicted RBP13.61□□□□□ -0.23
CSF3R-210ENST00000480825 TSR2Q969E8 191 aaKnown RBP13.61□□□□□ -0.23
CSF3R-210ENST00000480825 GOPCQ9HD26 462 aa13.6□□□□□ -0.23
CSF3R-210ENST00000480825 GTF2F1P35269 517 aaKnown RBP eCLIP13.6□□□□□ -0.23
CSF3R-210ENST00000480825 CCDC178Q5BJE1 867 aa13.6□□□□□ -0.23
CSF3R-210ENST00000480825 ANO10Q9NW15 660 aa13.6□□□□□ -0.23
CSF3R-210ENST00000480825 MVPQ14764 893 aaKnown RBP13.6□□□□□ -0.23
CSF3R-210ENST00000480825 GSTTP1A0A1W2PQM5 241 aa13.6□□□□□ -0.23
CSF3R-210ENST00000480825 NLRP6P59044 892 aa13.6□□□□□ -0.23
CSF3R-210ENST00000480825 FKBP15Q5T1M5 1219 aa13.6□□□□□ -0.23
CSF3R-210ENST00000480825 HDGFL1Q5TGJ6 251 aa13.6□□□□□ -0.23
CSF3R-210ENST00000480825 CWC27Q6UX04 472 aaKnown RBP13.6□□□□□ -0.23
CSF3R-210ENST00000480825 AACSQ86V21 672 aa13.6□□□□□ -0.23
CSF3R-210ENST00000480825 AKNAQ7Z591 1439 aa13.6□□□□□ -0.23
CSF3R-210ENST00000480825 PPP1R12BO60237 982 aaPredicted RBP13.6□□□□□ -0.23
CSF3R-210ENST00000480825 CCDC175P0C221 793 aa13.6□□□□□ -0.23
CSF3R-210ENST00000480825 CCDC183Q5T5S1 534 aa13.6□□□□□ -0.23
CSF3R-210ENST00000480825 BCCIPQ9P287 314 aaKnown RBP eCLIP13.6□□□□□ -0.23
CSF3R-210ENST00000480825 TOP1P11387 765 aaKnown RBP13.59□□□□□ -0.23
CSF3R-210ENST00000480825 ANAPC15P60006 121 aa13.59□□□□□ -0.23
CSF3R-210ENST00000480825 UBE4AQ14139 1066 aa13.59□□□□□ -0.23
CSF3R-210ENST00000480825 SMARCC1Q92922 1105 aaPredicted RBP13.59□□□□□ -0.23
CSF3R-210ENST00000480825 RAI14Q9P0K7 980 aa13.59□□□□□ -0.23
CSF3R-210ENST00000480825 XPCQ01831 940 aaPredicted RBP13.59□□□□□ -0.23
CSF3R-210ENST00000480825 PPM1EQ8WY54 764 aa13.59□□□□□ -0.23
CSF3R-210ENST00000480825 CLIP2Q9UDT6 1046 aa13.59□□□□□ -0.23
CSF3R-210ENST00000480825 PDS5BQ9NTI5 1447 aa13.59□□□□□ -0.23
CSF3R-210ENST00000480825 POTEB2H3BUK9 544 aa13.59□□□□□ -0.23
CSF3R-210ENST00000480825 TNNT1P13805 278 aa13.59□□□□□ -0.23
CSF3R-210ENST00000480825 RBM42Q9BTD8 480 aaKnown RBP13.59□□□□□ -0.23
CSF3R-210ENST00000480825 PAFAH1B1P43034 410 aa13.58□□□□□ -0.23
CSF3R-210ENST00000480825 TDO2P48775 406 aa13.58□□□□□ -0.24
CSF3R-210ENST00000480825 RRBP1Q9P2E9 1410 aaKnown RBP13.58□□□□□ -0.24
CSF3R-210ENST00000480825 ZNF76P36508 570 aa13.58□□□□□ -0.24
CSF3R-210ENST00000480825 FKBP4Q02790 459 aaKnown RBP eCLIP13.58□□□□□ -0.24
CSF3R-210ENST00000480825 ATF7IPQ6VMQ6 1270 aa13.58□□□□□ -0.24
CSF3R-210ENST00000480825 CASTP20810 708 aaKnown RBP13.58□□□□□ -0.24
CSF3R-210ENST00000480825 CACNA2D4Q7Z3S7 1137 aa13.57□□□□□ -0.24
CSF3R-210ENST00000480825 CCDC83Q8IWF9 413 aa13.57□□□□□ -0.24
CSF3R-210ENST00000480825 GIGYF2Q6Y7W6 1299 aaKnown RBP13.57□□□□□ -0.24
CSF3R-210ENST00000480825 VPS36Q86VN1 386 aa13.57□□□□□ -0.24
CSF3R-210ENST00000480825 SPATA24Q86W54 205 aa13.57□□□□□ -0.24
CSF3R-210ENST00000480825 USO1O60763 962 aaKnown RBP13.56□□□□□ -0.24
CSF3R-210ENST00000480825 TSG101Q99816 390 aa13.56□□□□□ -0.24
CSF3R-210ENST00000480825 SPECC1Q5M775 1068 aa13.56□□□□□ -0.24
CSF3R-210ENST00000480825 PPP4R3BQ5MIZ7 849 aa13.56□□□□□ -0.24
CSF3R-210ENST00000480825 MPHOSPH10O00566 681 aaKnown RBP13.56□□□□□ -0.24
CSF3R-210ENST00000480825 KLHL10Q6JEL2 608 aa13.56□□□□□ -0.24
CSF3R-210ENST00000480825 CTR9Q6PD62 1173 aa13.56□□□□□ -0.24
CSF3R-210ENST00000480825 FERMT3Q86UX7 667 aa13.56□□□□□ -0.24
CSF3R-210ENST00000480825 TRIM21P19474 475 aaKnown RBP13.55□□□□□ -0.24
CSF3R-210ENST00000480825 NEMFO60524 1076 aa13.55□□□□□ -0.24
CSF3R-210ENST00000480825 ATF3P18847 181 aa13.55□□□□□ -0.24
CSF3R-210ENST00000480825 HOOK3Q86VS8 718 aa13.55□□□□□ -0.24
CSF3R-210ENST00000480825 SMG6Q86US8 1419 aaKnown RBP13.55□□□□□ -0.24
CSF3R-210ENST00000480825 SPECC1LQ69YQ0 1117 aa13.55□□□□□ -0.24
CSF3R-210ENST00000480825 PIBF1Q8WXW3 757 aa13.55□□□□□ -0.24
CSF3R-210ENST00000480825 SCAND2PQ9GZW5 306 aaPredicted RBP13.55□□□□□ -0.24
CSF3R-210ENST00000480825 DNA2P51530 1060 aa13.55□□□□□ -0.24
CSF3R-210ENST00000480825 JPH4Q96JJ6 628 aa13.55□□□□□ -0.24
CSF3R-210ENST00000480825 C16orf45Q96MC5 204 aaPredicted RBP13.55□□□□□ -0.24
CSF3R-210ENST00000480825 SRGAP3O43295 1099 aa13.55□□□□□ -0.24
CSF3R-210ENST00000480825 RBM25P49756 843 aaKnown RBP13.55□□□□□ -0.24
CSF3R-210ENST00000480825 LARP1Q6PKG0 1096 aaKnown RBP13.55□□□□□ -0.24
CSF3R-210ENST00000480825 CTNNBL1Q8WYA6 563 aaPredicted RBP13.55□□□□□ -0.24
CSF3R-210ENST00000480825 WDR63Q8IWG1 891 aa13.54□□□□□ -0.24
CSF3R-210ENST00000480825 PNISRQ8TF01 805 aaKnown RBP13.54□□□□□ -0.24
CSF3R-210ENST00000480825 NAA15Q9BXJ9 866 aaKnown RBP13.54□□□□□ -0.24
CSF3R-210ENST00000480825 TRMT1Q9NXH9 659 aaKnown RBP13.54□□□□□ -0.24
CSF3R-210ENST00000480825 ZHX1Q9UKY1 873 aaPredicted RBP13.54□□□□□ -0.24
CSF3R-210ENST00000480825 SCAPERQ9BY12 1400 aa13.54□□□□□ -0.24
CSF3R-210ENST00000480825 NUP88Q99567 741 aaPredicted RBP13.54□□□□□ -0.24
CSF3R-210ENST00000480825 YEATS4O95619 227 aa13.54□□□□□ -0.24
CSF3R-210ENST00000480825 LMAN1P49257 510 aa13.54□□□□□ -0.24
CSF3R-210ENST00000480825 TMX1Q9H3N1 280 aa13.54□□□□□ -0.24
CSF3R-210ENST00000480825 MPHOSPH8Q99549 860 aa13.53□□□□□ -0.24
CSF3R-210ENST00000480825 TAOK3Q9H2K8 898 aa13.53□□□□□ -0.24
CSF3R-210ENST00000480825 HLTFQ14527 1009 aaKnown RBP eCLIP13.53□□□□□ -0.24
CSF3R-210ENST00000480825 MYOM3Q5VTT5 1437 aa13.53□□□□□ -0.24
CSF3R-210ENST00000480825 USP5P45974 858 aa13.53□□□□□ -0.24
CSF3R-210ENST00000480825 IL1RAPL2Q9NP60 686 aa13.53□□□□□ -0.24
CSF3R-210ENST00000480825 C6orf163Q5TEZ5 329 aa13.53□□□□□ -0.24
CSF3R-210ENST00000480825 CTAGE5O15320 804 aa13.52□□□□□ -0.24
CSF3R-210ENST00000480825 GSDMDP57764 484 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms