RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 DIAPH1O60610 1272 aaKnown RBP12.89□□□□□ -0.35
CD46-214ENST00000480003 EVA1CP58658 441 aa12.89□□□□□ -0.35
CD46-214ENST00000480003 MEX3CQ5U5Q3 659 aaKnown RBP12.89□□□□□ -0.35
CD46-214ENST00000480003 ERBB3P21860 1342 aa12.88□□□□□ -0.35
CD46-214ENST00000480003 AFF2P51816 1311 aa12.88□□□□□ -0.35
CD46-214ENST00000480003 BLMP54132 1417 aaPredicted RBP12.88□□□□□ -0.35
CD46-214ENST00000480003 NBPF6Q5VWK0 638 aa12.88□□□□□ -0.35
CD46-214ENST00000480003 ZNF772Q68DY9 489 aaPredicted RBP12.88□□□□□ -0.35
CD46-214ENST00000480003 LARP1Q6PKG0 1096 aaKnown RBP12.88□□□□□ -0.35
CD46-214ENST00000480003 NBPF4Q96M43 638 aa12.88□□□□□ -0.35
CD46-214ENST00000480003 CFAP53Q96M91 514 aa12.88□□□□□ -0.35
CD46-214ENST00000480003 EYA1Q99502 592 aa12.88□□□□□ -0.35
CD46-214ENST00000480003 PEAK1Q9H792 1746 aa12.88□□□□□ -0.35
CD46-214ENST00000480003 ABCC6O95255 1503 aa12.88□□□□□ -0.35
CD46-214ENST00000480003 WDR17Q8IZU2 1322 aa12.88□□□□□ -0.35
CD46-214ENST00000480003 LTV1Q96GA3 475 aaPredicted RBP12.87□□□□□ -0.35
CD46-214ENST00000480003 USP21Q9UK80 565 aa12.87□□□□□ -0.35
CD46-214ENST00000480003 LMO7Q8WWI1 1683 aa12.86□□□□□ -0.35
CD46-214ENST00000480003 CDK12Q9NYV4 1490 aaPredicted RBP12.86□□□□□ -0.35
CD46-214ENST00000480003 VPS72Q15906 364 aa12.86□□□□□ -0.35
CD46-214ENST00000480003 ASTLQ6HA08 431 aaPredicted RBP12.86□□□□□ -0.35
CD46-214ENST00000480003 KLHL34Q8N239 644 aa12.86□□□□□ -0.35
CD46-214ENST00000480003 CARD10Q9BWT7 1032 aa12.86□□□□□ -0.35
CD46-214ENST00000480003 STRN4Q9NRL3 753 aa12.86□□□□□ -0.35
CD46-214ENST00000480003 COL14A1Q05707 1796 aaKnown RBP12.86□□□□□ -0.35
CD46-214ENST00000480003 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
CD46-214ENST00000480003 COL5A2P05997 1499 aaPredicted RBP12.85□□□□□ -0.35
CD46-214ENST00000480003 PELP1Q8IZL8 1130 aaKnown RBP12.85□□□□□ -0.35
CD46-214ENST00000480003 PNISRQ8TF01 805 aaKnown RBP12.85□□□□□ -0.35
CD46-214ENST00000480003 QTRT2Q9H974 415 aaKnown RBP12.85□□□□□ -0.35
CD46-214ENST00000480003 NUDCQ9Y266 331 aa12.85□□□□□ -0.35
CD46-214ENST00000480003 ATMINO43313 823 aaPredicted RBP12.84□□□□□ -0.35
CD46-214ENST00000480003 CSB-PGBD3P0DP91 1061 aa12.84□□□□□ -0.35
CD46-214ENST00000480003 TOM1L2Q6ZVM7 507 aa12.84□□□□□ -0.35
CD46-214ENST00000480003 NLRP2Q9NX02 1062 aa12.84□□□□□ -0.35
CD46-214ENST00000480003 TRPC6Q9Y210 931 aa12.84□□□□□ -0.35
CD46-214ENST00000480003 SPATA31A5Q5VU36 1347 aa12.84□□□□□ -0.35
CD46-214ENST00000480003 SPATA31A7Q8IWB4 1347 aa12.84□□□□□ -0.35
CD46-214ENST00000480003 LTN1O94822 1766 aa12.84□□□□□ -0.35
CD46-214ENST00000480003 MRS2Q9HD23 443 aa12.83□□□□□ -0.36
CD46-214ENST00000480003 TRPC5Q9UL62 973 aaPredicted RBP12.83□□□□□ -0.36
CD46-214ENST00000480003 SPATA31A1Q5TZJ5 1347 aa12.83□□□□□ -0.36
CD46-214ENST00000480003 IGSF1Q8N6C5 1336 aa12.83□□□□□ -0.36
CD46-214ENST00000480003 ONECUT3O60422 494 aaPredicted RBP12.82□□□□□ -0.36
CD46-214ENST00000480003 GJD4Q96KN9 370 aaPredicted RBP12.82□□□□□ -0.36
CD46-214ENST00000480003 ADAMTS8Q9UP79 889 aa12.82□□□□□ -0.36
CD46-214ENST00000480003 THRAP3Q9Y2W1 955 aaKnown RBP12.82□□□□□ -0.36
CD46-214ENST00000480003 RGPD5Q99666 1765 aa12.81□□□□□ -0.36
CD46-214ENST00000480003 ATRNO75882 1429 aa12.81□□□□□ -0.36
CD46-214ENST00000480003 CRB1P82279 1406 aa12.81□□□□□ -0.36
CD46-214ENST00000480003 NCAPD2Q15021 1401 aa12.81□□□□□ -0.36
CD46-214ENST00000480003 FCHSD2O94868 740 aa12.81□□□□□ -0.36
CD46-214ENST00000480003 SULT6B1Q6IMI4 303 aa12.81□□□□□ -0.36
CD46-214ENST00000480003 BARGINQ6ZT62 677 aa12.81□□□□□ -0.36
CD46-214ENST00000480003 TCP11L2Q8N4U5 519 aa12.81□□□□□ -0.36
CD46-214ENST00000480003 U2SURPO15042 1029 aaKnown RBP12.8□□□□□ -0.36
CD46-214ENST00000480003 U2AF1L5P0DN76 240 aaPredicted RBP12.8□□□□□ -0.36
CD46-214ENST00000480003 RXRBP28702 533 aa12.8□□□□□ -0.36
CD46-214ENST00000480003 U2AF1Q01081 240 aaKnown RBP eCLIP12.8□□□□□ -0.366e-10■■■□□ 18.8
CD46-214ENST00000480003 DCAF8Q5TAQ9 597 aa12.8□□□□□ -0.36
CD46-214ENST00000480003 USHBP1Q8N6Y0 703 aa12.8□□□□□ -0.36
CD46-214ENST00000480003 PCDHB13Q9Y5F0 798 aa12.8□□□□□ -0.36
CD46-214ENST00000480003 KDRP35968 1356 aa12.8□□□□□ -0.36
CD46-214ENST00000480003 NWD2Q9ULI1 1742 aa12.79□□□□□ -0.36
CD46-214ENST00000480003 HMOX1P09601 288 aa12.79□□□□□ -0.36
CD46-214ENST00000480003 IFNLR1Q8IU57 520 aaPredicted RBP12.79□□□□□ -0.36
CD46-214ENST00000480003 AEBP1Q8IUX7 1158 aa12.79□□□□□ -0.36
CD46-214ENST00000480003 UPF1Q92900 1129 aaKnown RBP eCLIP12.79□□□□□ -0.36
CD46-214ENST00000480003 PLEKHF1Q96S99 279 aa12.79□□□□□ -0.36
CD46-214ENST00000480003 SGIP1Q9BQI5 828 aa12.79□□□□□ -0.36
CD46-214ENST00000480003 RSPH6AQ9H0K4 717 aa12.79□□□□□ -0.36
CD46-214ENST00000480003 BMP2KQ9NSY1 1161 aaPredicted RBP12.79□□□□□ -0.36
CD46-214ENST00000480003 RBM6P78332 1123 aaKnown RBP12.78□□□□□ -0.36
CD46-214ENST00000480003 USP35Q9P2H5 1018 aa12.78□□□□□ -0.36
CD46-214ENST00000480003 CCDC9Q9Y3X0 531 aaKnown RBP12.78□□□□□ -0.36
CD46-214ENST00000480003 NRAPQ86VF7 1730 aa12.78□□□□□ -0.36
CD46-214ENST00000480003 PLCH1Q4KWH8 1693 aa12.77□□□□□ -0.36
CD46-214ENST00000480003 IL2RBP14784 551 aa12.77□□□□□ -0.37
CD46-214ENST00000480003 ATN1P54259 1190 aaPredicted RBP12.77□□□□□ -0.37
CD46-214ENST00000480003 CDCA7Q9BWT1 371 aaPredicted RBP12.77□□□□□ -0.37
CD46-214ENST00000480003 TIE1P35590 1138 aa12.76□□□□□ -0.37
CD46-214ENST00000480003 WDR43Q15061 677 aaKnown RBP eCLIP12.76□□□□□ -0.37
CD46-214ENST00000480003 PHACTR3Q96KR7 559 aa12.76□□□□□ -0.37
CD46-214ENST00000480003 PNNQ9H307 717 aaKnown RBP12.76□□□□□ -0.37
CD46-214ENST00000480003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.76□□□□□ -0.376e-9■■□□□ 12.6
CD46-214ENST00000480003 DISP2A7MBM2 1401 aa12.75□□□□□ -0.37
CD46-214ENST00000480003 TATP17735 454 aaPredicted RBP12.75□□□□□ -0.37
CD46-214ENST00000480003 PRKAR2BP31323 418 aa12.75□□□□□ -0.37
CD46-214ENST00000480003 FAM98CQ17RN3 349 aaKnown RBP12.75□□□□□ -0.37
CD46-214ENST00000480003 IFNL1Q8IU54 200 aa12.75□□□□□ -0.37
CD46-214ENST00000480003 FAM9BQ8IZU0 186 aa12.75□□□□□ -0.37
CD46-214ENST00000480003 RAPGEF4Q8WZA2 1011 aa12.75□□□□□ -0.37
CD46-214ENST00000480003 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.75□□□□□ -0.37
CD46-214ENST00000480003 RGPD1P0DJD0 1748 aa12.74□□□□□ -0.37
CD46-214ENST00000480003 PYGBP11216 843 aa12.74□□□□□ -0.37
CD46-214ENST00000480003 METRNQ9UJH8 293 aa12.74□□□□□ -0.37
CD46-214ENST00000480003 RGPD2P0DJD1 1756 aa12.74□□□□□ -0.37
CD46-214ENST00000480003 PLEKHG2Q9H7P9 1386 aa12.73□□□□□ -0.37
CD46-214ENST00000480003 EXOC5O00471 708 aa12.73□□□□□ -0.37
CD46-214ENST00000480003 MTHFSDQ2M296 383 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms