RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 PLEKHF1Q96S99 279 aa15.54■□□□□ 0.08
TRAPPC12-219ENST00000479955 EXOC5O00471 708 aa15.53■□□□□ 0.08
TRAPPC12-219ENST00000479955 ONECUT3O60422 494 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC12-219ENST00000479955 RXRBP28702 533 aa15.53■□□□□ 0.08
TRAPPC12-219ENST00000479955 GAS2L2Q8NHY3 880 aa15.53■□□□□ 0.08
TRAPPC12-219ENST00000479955 PARP4Q9UKK3 1724 aaKnown RBP15.53■□□□□ 0.08
TRAPPC12-219ENST00000479955 FAM98CQ17RN3 349 aaKnown RBP15.52■□□□□ 0.08
TRAPPC12-219ENST00000479955 NGEFQ8N5V2 710 aa15.52■□□□□ 0.08
TRAPPC12-219ENST00000479955 ZCRB1Q8TBF4 217 aaKnown RBP15.52■□□□□ 0.08
TRAPPC12-219ENST00000479955 DDB1Q16531 1140 aa15.51■□□□□ 0.07
TRAPPC12-219ENST00000479955 CCDC146Q8IYE0 955 aa15.51■□□□□ 0.07
TRAPPC12-219ENST00000479955 OVOS2A0A0G2JMS6 1433 aa15.51■□□□□ 0.07
TRAPPC12-219ENST00000479955 A0A0G2JS52 829 aa15.5■□□□□ 0.07
TRAPPC12-219ENST00000479955 MYT1Q01538 1121 aa15.5■□□□□ 0.07
TRAPPC12-219ENST00000479955 NCBP3Q53F19 620 aaKnown RBP15.5■□□□□ 0.07
TRAPPC12-219ENST00000479955 PHACTR3Q96KR7 559 aa15.5■□□□□ 0.07
TRAPPC12-219ENST00000479955 RGS17Q9UGC6 210 aaPredicted RBP15.5■□□□□ 0.07
TRAPPC12-219ENST00000479955 DISP2A7MBM2 1401 aa15.5■□□□□ 0.07
TRAPPC12-219ENST00000479955 WNK3Q9BYP7 1800 aa15.5■□□□□ 0.07
TRAPPC12-219ENST00000479955 GLI3P10071 1580 aa15.49■□□□□ 0.07
TRAPPC12-219ENST00000479955 MEGF6O75095 1541 aa15.49■□□□□ 0.07
TRAPPC12-219ENST00000479955 C1orf141Q5JVX7 400 aa15.49■□□□□ 0.07
TRAPPC12-219ENST00000479955 PCDH11XQ9BZA7 1347 aa15.48■□□□□ 0.07
TRAPPC12-219ENST00000479955 PCDH11YQ9BZA8 1340 aa15.48■□□□□ 0.07
TRAPPC12-219ENST00000479955 APAF1O14727 1248 aa15.48■□□□□ 0.07
TRAPPC12-219ENST00000479955 HSP90AB1P08238 724 aaKnown RBP15.48■□□□□ 0.07
TRAPPC12-219ENST00000479955 LMOD3Q0VAK6 560 aa15.48■□□□□ 0.07
TRAPPC12-219ENST00000479955 PDE3BQ13370 1112 aa15.48■□□□□ 0.07
TRAPPC12-219ENST00000479955 NFE2L2Q16236 605 aa15.48■□□□□ 0.07
TRAPPC12-219ENST00000479955 MTHFSDQ2M296 383 aaKnown RBP15.48■□□□□ 0.07
TRAPPC12-219ENST00000479955 IFNL2Q8IZJ0 200 aa15.48■□□□□ 0.07
TRAPPC12-219ENST00000479955 HTATSF1O43719 755 aaKnown RBP15.47■□□□□ 0.07
TRAPPC12-219ENST00000479955 TMPOP42166 694 aaKnown RBP15.47■□□□□ 0.07
TRAPPC12-219ENST00000479955 AKAP4Q5JQC9 854 aa15.47■□□□□ 0.07
TRAPPC12-219ENST00000479955 ZNF530Q6P9A1 599 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC12-219ENST00000479955 PKD1L3Q7Z443 1732 aa15.46■□□□□ 0.07
TRAPPC12-219ENST00000479955 GNAT3A8MTJ3 354 aa15.46■□□□□ 0.07
TRAPPC12-219ENST00000479955 RIPK4P57078 832 aa15.46■□□□□ 0.07
TRAPPC12-219ENST00000479955 POTEAQ6S8J7 498 aa15.46■□□□□ 0.07
TRAPPC12-219ENST00000479955 SEPT12Q8IYM1 358 aa15.46■□□□□ 0.07
TRAPPC12-219ENST00000479955 RTF1Q92541 710 aaKnown RBP15.46■□□□□ 0.07
TRAPPC12-219ENST00000479955 DDX54Q8TDD1 881 aaKnown RBP15.45■□□□□ 0.06
TRAPPC12-219ENST00000479955 THSD7AQ9UPZ6 1657 aa15.44■□□□□ 0.06
TRAPPC12-219ENST00000479955 TNS2Q63HR2 1409 aa15.44■□□□□ 0.06
TRAPPC12-219ENST00000479955 PHKG2P15735 406 aa15.44■□□□□ 0.06
TRAPPC12-219ENST00000479955 NEUROD2Q15784 382 aa15.44■□□□□ 0.06
TRAPPC12-219ENST00000479955 NKX1-1Q15270 411 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC12-219ENST00000479955 CCDC27Q2M243 656 aa15.43■□□□□ 0.06
TRAPPC12-219ENST00000479955 DCAF5Q96JK2 942 aa15.43■□□□□ 0.06
TRAPPC12-219ENST00000479955 MAP3K5Q99683 1374 aa15.43■□□□□ 0.06
TRAPPC12-219ENST00000479955 CYP27B1O15528 508 aa15.42■□□□□ 0.06
TRAPPC12-219ENST00000479955 HNRNPUQ00839 825 aaKnown RBP eCLIP15.42■□□□□ 0.06
TRAPPC12-219ENST00000479955 CALD1Q05682 793 aaKnown RBP15.42■□□□□ 0.06
TRAPPC12-219ENST00000479955 LRRC37A3O60309 1634 aa15.42■□□□□ 0.06
TRAPPC12-219ENST00000479955 KRT27Q7Z3Y8 459 aa15.41■□□□□ 0.06
TRAPPC12-219ENST00000479955 RRP7AQ9Y3A4 280 aaKnown RBP15.41■□□□□ 0.06
TRAPPC12-219ENST00000479955 DLG5Q8TDM6 1919 aa15.39■□□□□ 0.05
TRAPPC12-219ENST00000479955 ERVV-2B6SEH9 535 aa15.39■□□□□ 0.05
TRAPPC12-219ENST00000479955 MARCH10Q8NA82 808 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC12-219ENST00000479955 SHANK3Q9BYB0 1731 aa15.39■□□□□ 0.05
TRAPPC12-219ENST00000479955 MPRIPQ6WCQ1 1025 aa15.38■□□□□ 0.05
TRAPPC12-219ENST00000479955 WDR63Q8IWG1 891 aa15.38■□□□□ 0.05
TRAPPC12-219ENST00000479955 TRIM35Q9UPQ4 493 aa15.38■□□□□ 0.05
TRAPPC12-219ENST00000479955 SALL2Q9Y467 1007 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC12-219ENST00000479955 RNMTO43148 476 aaKnown RBP15.37■□□□□ 0.05
TRAPPC12-219ENST00000479955 TEFQ10587 303 aa15.37■□□□□ 0.05
TRAPPC12-219ENST00000479955 FAM196AQ6ZSG2 479 aa15.37■□□□□ 0.05
TRAPPC12-219ENST00000479955 WWC1Q8IX03 1113 aa15.37■□□□□ 0.05
TRAPPC12-219ENST00000479955 BCL9O00512 1426 aa15.36■□□□□ 0.05
TRAPPC12-219ENST00000479955 RGS12O14924 1447 aa15.36■□□□□ 0.05
TRAPPC12-219ENST00000479955 MCM10Q7L590 875 aa15.36■□□□□ 0.05
TRAPPC12-219ENST00000479955 IL17REQ8NFR9 667 aa15.36■□□□□ 0.05
TRAPPC12-219ENST00000479955 SCN11AQ9UI33 1791 aa15.35■□□□□ 0.05
TRAPPC12-219ENST00000479955 CABP4P57796 275 aa15.35■□□□□ 0.05
TRAPPC12-219ENST00000479955 LGR6Q9HBX8 967 aa15.35■□□□□ 0.05
TRAPPC12-219ENST00000479955 BABAM1Q9NWV8 329 aa15.35■□□□□ 0.05
TRAPPC12-219ENST00000479955 BRWD3Q6RI45 1802 aa15.35■□□□□ 0.05
TRAPPC12-219ENST00000479955 ZBED9Q6R2W3 1325 aa15.35■□□□□ 0.05
TRAPPC12-219ENST00000479955 CEMIPQ8WUJ3 1361 aa15.35■□□□□ 0.05
TRAPPC12-219ENST00000479955 TAF7Q15545 349 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC12-219ENST00000479955 IL16Q14005 1332 aa15.34■□□□□ 0.05
TRAPPC12-219ENST00000479955 ADAMTS7Q9UKP4 1686 aa15.34■□□□□ 0.05
TRAPPC12-219ENST00000479955 GNAI1P63096 354 aa15.33■□□□□ 0.04
TRAPPC12-219ENST00000479955 GOLGA2Q08379 1002 aa15.33■□□□□ 0.04
TRAPPC12-219ENST00000479955 DCTN1Q14203 1278 aa15.33■□□□□ 0.04
TRAPPC12-219ENST00000479955 YTHDC1Q96MU7 727 aaKnown RBP15.33■□□□□ 0.04
TRAPPC12-219ENST00000479955 SLC52A2Q9HAB3 445 aa15.33■□□□□ 0.04
TRAPPC12-219ENST00000479955 TMOD3Q9NYL9 352 aa15.33■□□□□ 0.04
TRAPPC12-219ENST00000479955 KDM6AO15550 1401 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC12-219ENST00000479955 VIRMAQ69YN4 1812 aaKnown RBP15.32■□□□□ 0.04
TRAPPC12-219ENST00000479955 SENP3-EIF4A1A0A087X0R7 540 aa15.32■□□□□ 0.04
TRAPPC12-219ENST00000479955 NFATC2IPQ8NCF5 419 aa15.32■□□□□ 0.04
TRAPPC12-219ENST00000479955 ZNF521Q96K83 1311 aa15.32■□□□□ 0.04
TRAPPC12-219ENST00000479955 PRIM1P49642 420 aaKnown RBP15.31■□□□□ 0.04
TRAPPC12-219ENST00000479955 SYTL4Q96C24 671 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC12-219ENST00000479955 CFAP44Q96MT7 982 aa15.31■□□□□ 0.04
TRAPPC12-219ENST00000479955 THUMPD2Q9BTF0 503 aaKnown RBP15.31■□□□□ 0.04
TRAPPC12-219ENST00000479955 IFT57Q9NWB7 429 aa15.31■□□□□ 0.04
TRAPPC12-219ENST00000479955 BTBD11A6QL63 1104 aa15.3■□□□□ 0.04
TRAPPC12-219ENST00000479955 E9PSI1 815 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms