RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 CGNL1Q0VF96 1302 aa19.83■□□□□ 0.77
ATG4B-218ENST00000479554 HSP90AB2PQ58FF8 381 aa19.83■□□□□ 0.77
ATG4B-218ENST00000479554 ZCRB1Q8TBF4 217 aaKnown RBP19.83■□□□□ 0.77
ATG4B-218ENST00000479554 PAPPAQ13219 1627 aa19.83■□□□□ 0.76
ATG4B-218ENST00000479554 HSPA5P11021 654 aaKnown RBP19.82■□□□□ 0.76
ATG4B-218ENST00000479554 SLC15A2Q16348 729 aa19.82■□□□□ 0.76
ATG4B-218ENST00000479554 RAPGEF4Q8WZA2 1011 aa19.82■□□□□ 0.76
ATG4B-218ENST00000479554 ANKRD26Q9UPS8 1709 aa19.82■□□□□ 0.76
ATG4B-218ENST00000479554 KAT6BQ8WYB5 2073 aa19.81■□□□□ 0.76
ATG4B-218ENST00000479554 EMILIN1Q9Y6C2 1016 aa19.81■□□□□ 0.76
ATG4B-218ENST00000479554 SYTL4Q96C24 671 aaPredicted RBP19.8■□□□□ 0.76
ATG4B-218ENST00000479554 PDGFDQ9GZP0 370 aaPredicted RBP19.8■□□□□ 0.76
ATG4B-218ENST00000479554 TATP17735 454 aaPredicted RBP19.79■□□□□ 0.76
ATG4B-218ENST00000479554 PPM1GO15355 546 aaPredicted RBP19.78■□□□□ 0.76
ATG4B-218ENST00000479554 ZBTB7AO95365 584 aa19.78■□□□□ 0.76
ATG4B-218ENST00000479554 PRIM1P49642 420 aaKnown RBP19.77■□□□□ 0.76
ATG4B-218ENST00000479554 NSD2O96028 1365 aa19.76■□□□□ 0.75
ATG4B-218ENST00000479554 LRRC4BQ9NT99 713 aa19.76■□□□□ 0.75
ATG4B-218ENST00000479554 PCDH11XQ9BZA7 1347 aa19.76■□□□□ 0.75
ATG4B-218ENST00000479554 PCDH11YQ9BZA8 1340 aa19.76■□□□□ 0.75
ATG4B-218ENST00000479554 SLC27A3Q5K4L6 730 aa19.75■□□□□ 0.75
ATG4B-218ENST00000479554 MAP2P11137 1827 aaKnown RBP19.74■□□□□ 0.75
ATG4B-218ENST00000479554 ZEB1P37275 1124 aaPredicted RBP19.74■□□□□ 0.75
ATG4B-218ENST00000479554 ZNF827Q17R98 1081 aa19.74■□□□□ 0.75
ATG4B-218ENST00000479554 NCAPD2Q15021 1401 aa19.74■□□□□ 0.75
ATG4B-218ENST00000479554 WASHC2AQ641Q2 1341 aa19.74■□□□□ 0.75
ATG4B-218ENST00000479554 LY75O60449 1722 aa19.73■□□□□ 0.75
ATG4B-218ENST00000479554 MTFR1LQ9H019 292 aa19.73■□□□□ 0.75
ATG4B-218ENST00000479554 ATF5Q9Y2D1 282 aaPredicted RBP19.73■□□□□ 0.75
ATG4B-218ENST00000479554 PKD1L3Q7Z443 1732 aa19.73■□□□□ 0.75
ATG4B-218ENST00000479554 PANK3Q9H999 370 aa19.72■□□□□ 0.75
ATG4B-218ENST00000479554 POLKQ9UBT6 870 aa19.72■□□□□ 0.75
ATG4B-218ENST00000479554 PTGER2P43116 358 aa19.71■□□□□ 0.75
ATG4B-218ENST00000479554 TNNT2P45379 298 aaPredicted RBP19.71■□□□□ 0.75
ATG4B-218ENST00000479554 QSER1Q2KHR3 1735 aa19.7■□□□□ 0.74
ATG4B-218ENST00000479554 AKT1S1Q96B36 256 aa19.69■□□□□ 0.74
ATG4B-218ENST00000479554 CYP27B1O15528 508 aa19.68■□□□□ 0.74
ATG4B-218ENST00000479554 KCNQ4P56696 695 aa19.68■□□□□ 0.74
ATG4B-218ENST00000479554 EYA1Q99502 592 aa19.68■□□□□ 0.74
ATG4B-218ENST00000479554 CCNL1Q9UK58 526 aaPredicted RBP19.68■□□□□ 0.74
ATG4B-218ENST00000479554 TOGARAM1Q9Y4F4 1720 aa19.68■□□□□ 0.74
ATG4B-218ENST00000479554 DCAF8L1A6NGE4 600 aa19.67■□□□□ 0.74
ATG4B-218ENST00000479554 TUBGCP6Q96RT7 1819 aa19.67■□□□□ 0.74
ATG4B-218ENST00000479554 TFCP2L1Q9NZI6 479 aa19.66■□□□□ 0.74
ATG4B-218ENST00000479554 SPG7Q9UQ90 795 aa19.66■□□□□ 0.74
ATG4B-218ENST00000479554 EIF4A2Q14240 407 aaKnown RBP19.65■□□□□ 0.74
ATG4B-218ENST00000479554 SGIP1Q9BQI5 828 aa19.65■□□□□ 0.74
ATG4B-218ENST00000479554 MPRIPQ6WCQ1 1025 aa19.64■□□□□ 0.73
ATG4B-218ENST00000479554 PNPLA7Q6ZV29 1317 aa19.64■□□□□ 0.73
ATG4B-218ENST00000479554 ITGB4P16144 1822 aa19.63■□□□□ 0.73
ATG4B-218ENST00000479554 PALLDQ8WX93 1383 aa19.63■□□□□ 0.73
ATG4B-218ENST00000479554 FHDC1Q9C0D6 1143 aaPredicted RBP19.63■□□□□ 0.73
ATG4B-218ENST00000479554 C5P01031 1676 aa19.62■□□□□ 0.73
ATG4B-218ENST00000479554 MORC1Q86VD1 984 aa19.62■□□□□ 0.73
ATG4B-218ENST00000479554 SLC16A10Q8TF71 515 aa19.62■□□□□ 0.73
ATG4B-218ENST00000479554 ARXQ96QS3 562 aa19.62■□□□□ 0.73
ATG4B-218ENST00000479554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.62■□□□□ 0.73
ATG4B-218ENST00000479554 KNSTRNQ9Y448 316 aa19.62■□□□□ 0.73
ATG4B-218ENST00000479554 PLEKHG2Q9H7P9 1386 aa19.61■□□□□ 0.73
ATG4B-218ENST00000479554 NKX1-1Q15270 411 aaPredicted RBP19.61■□□□□ 0.73
ATG4B-218ENST00000479554 KIF7Q2M1P5 1343 aa19.6■□□□□ 0.73
ATG4B-218ENST00000479554 IGSF1Q8N6C5 1336 aa19.6■□□□□ 0.73
ATG4B-218ENST00000479554 HMGB2P26583 209 aaKnown RBP19.59■□□□□ 0.73
ATG4B-218ENST00000479554 POLD1P28340 1107 aa19.59■□□□□ 0.73
ATG4B-218ENST00000479554 IFNL2Q8IZJ0 200 aa19.59■□□□□ 0.73
ATG4B-218ENST00000479554 SMARCC1Q92922 1105 aaPredicted RBP19.59■□□□□ 0.73
ATG4B-218ENST00000479554 SYT17Q9BSW7 474 aa19.59■□□□□ 0.73
ATG4B-218ENST00000479554 COL24A1Q17RW2 1714 aa19.59■□□□□ 0.73
ATG4B-218ENST00000479554 PHKG2P15735 406 aa19.58■□□□□ 0.72
ATG4B-218ENST00000479554 TAF1LQ8IZX4 1826 aa19.58■□□□□ 0.72
ATG4B-218ENST00000479554 MAP3K5Q99683 1374 aa19.57■□□□□ 0.72
ATG4B-218ENST00000479554 MSH5O43196 834 aa19.57■□□□□ 0.72
ATG4B-218ENST00000479554 PIGBQ92521 554 aa19.57■□□□□ 0.72
ATG4B-218ENST00000479554 YY1P25490 414 aa19.56■□□□□ 0.72
ATG4B-218ENST00000479554 TMOD3Q9NYL9 352 aa19.56■□□□□ 0.72
ATG4B-218ENST00000479554 C4BP0C0L5 1744 aa19.55■□□□□ 0.72
ATG4B-218ENST00000479554 AMER1Q5JTC6 1135 aaPredicted RBP19.54■□□□□ 0.72
ATG4B-218ENST00000479554 COL23A1Q86Y22 540 aaPredicted RBP19.53■□□□□ 0.72
ATG4B-218ENST00000479554 KLHL34Q8N239 644 aa19.53■□□□□ 0.72
ATG4B-218ENST00000479554 UTRNP46939 3433 aa19.53■□□□□ 0.72
ATG4B-218ENST00000479554 PLEKHO1Q53GL0 409 aaPredicted RBP19.52■□□□□ 0.72
ATG4B-218ENST00000479554 AK7Q96M32 723 aa19.52■□□□□ 0.72
ATG4B-218ENST00000479554 LOC102724428A0A0B4J2F2 783 aa19.51■□□□□ 0.71
ATG4B-218ENST00000479554 SIK1P57059 783 aa19.51■□□□□ 0.71
ATG4B-218ENST00000479554 FLAD1Q8NFF5 587 aa19.51■□□□□ 0.71
ATG4B-218ENST00000479554 HSP90AB1P08238 724 aaKnown RBP19.5■□□□□ 0.71
ATG4B-218ENST00000479554 AMOTQ4VCS5 1084 aa19.5■□□□□ 0.71
ATG4B-218ENST00000479554 ZNF530Q6P9A1 599 aaPredicted RBP19.5■□□□□ 0.71
ATG4B-218ENST00000479554 AEBP1Q8IUX7 1158 aa19.5■□□□□ 0.71
ATG4B-218ENST00000479554 ASAP1Q9ULH1 1129 aa19.5■□□□□ 0.71
ATG4B-218ENST00000479554 DCAF5Q96JK2 942 aa19.49■□□□□ 0.71
ATG4B-218ENST00000479554 UBR3Q6ZT12 1888 aa19.48■□□□□ 0.71
ATG4B-218ENST00000479554 IL13P35225 146 aa19.48■□□□□ 0.71
ATG4B-218ENST00000479554 MSL1Q68DK7 614 aa19.48■□□□□ 0.71
ATG4B-218ENST00000479554 SULT6B1Q6IMI4 303 aa19.48■□□□□ 0.71
ATG4B-218ENST00000479554 KDM6AO15550 1401 aaPredicted RBP19.48■□□□□ 0.71
ATG4B-218ENST00000479554 KDRP35968 1356 aa19.47■□□□□ 0.71
ATG4B-218ENST00000479554 ERVV-2B6SEH9 535 aa19.47■□□□□ 0.71
ATG4B-218ENST00000479554 LINC00116Q8NCU8 138 aa19.47■□□□□ 0.71
ATG4B-218ENST00000479554 ATG3Q9NT62 314 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms