RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 KCNQ2O43526 872 aa28.23■■■□□ 2.11
PKP4-209ENST00000479398 EIF4A2Q14240 407 aaKnown RBP28.23■■■□□ 2.11
PKP4-209ENST00000479398 CC2D1BQ5T0F9 858 aaKnown RBP28.22■■■□□ 2.11
PKP4-209ENST00000479398 ACSBG1Q96GR2 724 aa28.22■■■□□ 2.11
PKP4-209ENST00000479398 NPC1L1Q9UHC9 1359 aa28.18■■■□□ 2.1
PKP4-209ENST00000479398 NCAPD2Q15021 1401 aa28.18■■■□□ 2.1
PKP4-209ENST00000479398 MTHFSP49914 203 aa28.14■■■□□ 2.1
PKP4-209ENST00000479398 CNGB1Q14028 1251 aaPredicted RBP28.14■■■□□ 2.1
PKP4-209ENST00000479398 SHANK3Q9BYB0 1731 aa28.14■■■□□ 2.1
PKP4-209ENST00000479398 PROM2Q8N271 834 aa28.13■■■□□ 2.09
PKP4-209ENST00000479398 NHSQ6T4R5 1651 aa28.13■■■□□ 2.09
PKP4-209ENST00000479398 RREB1Q92766 1687 aa28.11■■■□□ 2.09
PKP4-209ENST00000479398 PSDA5PKW4 1024 aaPredicted RBP28.11■■■□□ 2.09
PKP4-209ENST00000479398 PRIM1P49642 420 aaKnown RBP28.11■■■□□ 2.09
PKP4-209ENST00000479398 IGSF1Q8N6C5 1336 aa28.11■■■□□ 2.09
PKP4-209ENST00000479398 PCDH11XQ9BZA7 1347 aa28.11■■■□□ 2.09
PKP4-209ENST00000479398 PCDH11YQ9BZA8 1340 aa28.11■■■□□ 2.09
PKP4-209ENST00000479398 NBPF14Q5TI25 921 aa28.1■■■□□ 2.09
PKP4-209ENST00000479398 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.1■■■□□ 2.09
PKP4-209ENST00000479398 SPG7Q9UQ90 795 aa28.1■■■□□ 2.09
PKP4-209ENST00000479398 RGPD3A6NKT7 1758 aaPredicted RBP28.09■■■□□ 2.09
PKP4-209ENST00000479398 RGPD4Q7Z3J3 1758 aa28.09■■■□□ 2.09
PKP4-209ENST00000479398 CYP27B1O15528 508 aa28.09■■■□□ 2.09
PKP4-209ENST00000479398 IL13P35225 146 aa28.09■■■□□ 2.09
PKP4-209ENST00000479398 R3HDM1Q15032 1099 aaKnown RBP28.09■■■□□ 2.09
PKP4-209ENST00000479398 TXNRD1Q16881 649 aa28.08■■■□□ 2.09
PKP4-209ENST00000479398 SYTL4Q96C24 671 aaPredicted RBP28.08■■■□□ 2.09
PKP4-209ENST00000479398 NUP188Q5SRE5 1749 aa28.06■■■□□ 2.08
PKP4-209ENST00000479398 BTAF1O14981 1849 aa28.06■■■□□ 2.08
PKP4-209ENST00000479398 PKD1L3Q7Z443 1732 aa28.04■■■□□ 2.08
PKP4-209ENST00000479398 NKX1-1Q15270 411 aaPredicted RBP28.03■■■□□ 2.08
PKP4-209ENST00000479398 ZEB1P37275 1124 aaPredicted RBP28.02■■■□□ 2.08
PKP4-209ENST00000479398 SULT6B1Q6IMI4 303 aa28.02■■■□□ 2.08
PKP4-209ENST00000479398 DOT1LQ8TEK3 1739 aa28.01■■■□□ 2.07
PKP4-209ENST00000479398 AEBP1Q8IUX7 1158 aa28.01■■■□□ 2.07
PKP4-209ENST00000479398 IFNL2Q8IZJ0 200 aa28.01■■■□□ 2.07
PKP4-209ENST00000479398 PLEKHG2Q9H7P9 1386 aa28■■■□□ 2.07
PKP4-209ENST00000479398 DIAPH1O60610 1272 aaKnown RBP28■■■□□ 2.07
PKP4-209ENST00000479398 PLEKHO1Q53GL0 409 aaPredicted RBP28■■■□□ 2.07
PKP4-209ENST00000479398 PHKG2P15735 406 aa27.98■■■□□ 2.07
PKP4-209ENST00000479398 AMOTQ4VCS5 1084 aa27.97■■■□□ 2.07
PKP4-209ENST00000479398 KDRP35968 1356 aa27.96■■■□□ 2.07
PKP4-209ENST00000479398 MPRIPQ6WCQ1 1025 aa27.95■■■□□ 2.06
PKP4-209ENST00000479398 ANO8Q9HCE9 1232 aaPredicted RBP27.95■■■□□ 2.06
PKP4-209ENST00000479398 LRRC4BQ9NT99 713 aa27.94■■■□□ 2.06
PKP4-209ENST00000479398 PPP2R1AP30153 589 aa27.93■■■□□ 2.06
PKP4-209ENST00000479398 SLC27A3Q5K4L6 730 aa27.93■■■□□ 2.06
PKP4-209ENST00000479398 HMOX1P09601 288 aa27.92■■■□□ 2.06
PKP4-209ENST00000479398 STK32BQ9NY57 414 aa27.92■■■□□ 2.06
PKP4-209ENST00000479398 ITGB4P16144 1822 aa27.91■■■□□ 2.06
PKP4-209ENST00000479398 SLC15A2Q16348 729 aa27.91■■■□□ 2.06
PKP4-209ENST00000479398 HSP90AB1P08238 724 aaKnown RBP27.9■■■□□ 2.06
PKP4-209ENST00000479398 DDX10Q13206 875 aaKnown RBP27.9■■■□□ 2.06
PKP4-209ENST00000479398 ZNF530Q6P9A1 599 aaPredicted RBP27.9■■■□□ 2.06
PKP4-209ENST00000479398 PIGBQ92521 554 aa27.9■■■□□ 2.06
PKP4-209ENST00000479398 CFAP53Q96M91 514 aa27.9■■■□□ 2.06
PKP4-209ENST00000479398 TOGARAM1Q9Y4F4 1720 aa27.89■■■□□ 2.05
PKP4-209ENST00000479398 COL3A1P02461 1466 aaPredicted RBP27.88■■■□□ 2.05
PKP4-209ENST00000479398 U2SURPO15042 1029 aaKnown RBP27.87■■■□□ 2.05
PKP4-209ENST00000479398 KCNQ4P56696 695 aa27.87■■■□□ 2.05
PKP4-209ENST00000479398 DCAF5Q96JK2 942 aa27.87■■■□□ 2.05
PKP4-209ENST00000479398 LY75O60449 1722 aa27.87■■■□□ 2.05
PKP4-209ENST00000479398 C1orf141Q5JVX7 400 aa27.86■■■□□ 2.05
PKP4-209ENST00000479398 TMOD3Q9NYL9 352 aa27.86■■■□□ 2.05
PKP4-209ENST00000479398 ERVV-2B6SEH9 535 aa27.85■■■□□ 2.05
PKP4-209ENST00000479398 SMARCC1Q92922 1105 aaPredicted RBP27.85■■■□□ 2.05
PKP4-209ENST00000479398 CCNL1Q9UK58 526 aaPredicted RBP27.85■■■□□ 2.05
PKP4-209ENST00000479398 SRCAPQ6ZRS2 3230 aa27.85■■■□□ 2.05
PKP4-209ENST00000479398 AKT1S1Q96B36 256 aa27.82■■■□□ 2.04
PKP4-209ENST00000479398 PDGFDQ9GZP0 370 aaPredicted RBP27.82■■■□□ 2.04
PKP4-209ENST00000479398 NUDCQ9Y266 331 aa27.82■■■□□ 2.04
PKP4-209ENST00000479398 ZNF827Q17R98 1081 aa27.81■■■□□ 2.04
PKP4-209ENST00000479398 AKAP4Q5JQC9 854 aa27.81■■■□□ 2.04
PKP4-209ENST00000479398 PALLDQ8WX93 1383 aa27.81■■■□□ 2.04
PKP4-209ENST00000479398 PAPPAQ13219 1627 aa27.81■■■□□ 2.04
PKP4-209ENST00000479398 ASAP1Q9ULH1 1129 aa27.8■■■□□ 2.04
PKP4-209ENST00000479398 LRP5O75197 1615 aa27.8■■■□□ 2.04
PKP4-209ENST00000479398 HMGB2P26583 209 aaKnown RBP27.79■■■□□ 2.04
PKP4-209ENST00000479398 MTHFSDQ2M296 383 aaKnown RBP27.79■■■□□ 2.04
PKP4-209ENST00000479398 CABP4P57796 275 aa27.78■■■□□ 2.04
PKP4-209ENST00000479398 SPON1Q9HCB6 807 aa27.78■■■□□ 2.04
PKP4-209ENST00000479398 ATG3Q9NT62 314 aa27.78■■■□□ 2.04
PKP4-209ENST00000479398 KDM6AO15550 1401 aaPredicted RBP27.77■■■□□ 2.04
PKP4-209ENST00000479398 RALBP1Q15311 655 aa27.76■■■□□ 2.03
PKP4-209ENST00000479398 CASZ1Q86V15 1759 aa27.75■■■□□ 2.03
PKP4-209ENST00000479398 U2AF1L5P0DN76 240 aaPredicted RBP27.74■■■□□ 2.03
PKP4-209ENST00000479398 U2AF1Q01081 240 aaKnown RBP eCLIP27.74■■■□□ 2.03
PKP4-209ENST00000479398 NFATC2IPQ8NCF5 419 aa27.74■■■□□ 2.03
PKP4-209ENST00000479398 TFCP2L1Q9NZI6 479 aa27.74■■■□□ 2.03
PKP4-209ENST00000479398 LOC102724428A0A0B4J2F2 783 aa27.73■■■□□ 2.03
PKP4-209ENST00000479398 SIK1P57059 783 aa27.73■■■□□ 2.03
PKP4-209ENST00000479398 LGR6Q9HBX8 967 aa27.73■■■□□ 2.03
PKP4-209ENST00000479398 ZBTB7AO95365 584 aa27.72■■■□□ 2.03
PKP4-209ENST00000479398 RSPH6AQ9H0K4 717 aa27.72■■■□□ 2.03
PKP4-209ENST00000479398 RNMTO43148 476 aaKnown RBP27.71■■■□□ 2.03
PKP4-209ENST00000479398 SCN11AQ9UI33 1791 aa27.71■■■□□ 2.03
PKP4-209ENST00000479398 FCHSD2O94868 740 aa27.7■■■□□ 2.02
PKP4-209ENST00000479398 PRKAR2BP31323 418 aa27.7■■■□□ 2.02
PKP4-209ENST00000479398 ATF5Q9Y2D1 282 aaPredicted RBP27.7■■■□□ 2.02
PKP4-209ENST00000479398 TAF1LQ8IZX4 1826 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms