RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 MAP3K19Q56UN5 1328 aa15.59■□□□□ 0.09
HDLBP-237ENST00000479169 HOXC9P31274 260 aa15.58■□□□□ 0.08
HDLBP-237ENST00000479169 ANKRD36BQ8N2N9 1353 aa15.58■□□□□ 0.08
HDLBP-237ENST00000479169 PELP1Q8IZL8 1130 aaKnown RBP15.57■□□□□ 0.08
HDLBP-237ENST00000479169 SLC16A10Q8TF71 515 aa15.57■□□□□ 0.08
HDLBP-237ENST00000479169 COG3Q96JB2 828 aa15.57■□□□□ 0.08
HDLBP-237ENST00000479169 TFCP2L1Q9NZI6 479 aa15.57■□□□□ 0.08
HDLBP-237ENST00000479169 SENP3-EIF4A1A0A087X0R7 540 aa15.56■□□□□ 0.08
HDLBP-237ENST00000479169 POLD1P28340 1107 aa15.56■□□□□ 0.08
HDLBP-237ENST00000479169 AMPHP49418 695 aa15.56■□□□□ 0.08
HDLBP-237ENST00000479169 NLGN2Q8NFZ4 835 aa15.56■□□□□ 0.08
HDLBP-237ENST00000479169 PUS7Q96PZ0 661 aaKnown RBP15.56■□□□□ 0.08
HDLBP-237ENST00000479169 TESK2Q96S53 571 aa15.56■□□□□ 0.08
HDLBP-237ENST00000479169 TONSLQ96HA7 1378 aa15.56■□□□□ 0.08
HDLBP-237ENST00000479169 C1QTNF8P60827 252 aa15.55■□□□□ 0.08
HDLBP-237ENST00000479169 ZCRB1Q8TBF4 217 aaKnown RBP15.55■□□□□ 0.08
HDLBP-237ENST00000479169 ST20-MTHFSA0A0A6YYL1 179 aa15.54■□□□□ 0.08
HDLBP-237ENST00000479169 USHBP1Q8N6Y0 703 aa15.54■□□□□ 0.08
HDLBP-237ENST00000479169 TAF1LQ8IZX4 1826 aa15.53■□□□□ 0.08
HDLBP-237ENST00000479169 RRS1Q15050 365 aaKnown RBP15.53■□□□□ 0.08
HDLBP-237ENST00000479169 CCNL1Q9UK58 526 aaPredicted RBP15.53■□□□□ 0.08
HDLBP-237ENST00000479169 C5P01031 1676 aa15.53■□□□□ 0.08
HDLBP-237ENST00000479169 NBPF6Q5VWK0 638 aa15.52■□□□□ 0.08
HDLBP-237ENST00000479169 NBPF4Q96M43 638 aa15.52■□□□□ 0.08
HDLBP-237ENST00000479169 KIF20BQ96Q89 1820 aa15.52■□□□□ 0.07
HDLBP-237ENST00000479169 CEP350Q5VT06 3117 aa15.52■□□□□ 0.07
HDLBP-237ENST00000479169 RTL1A6NKG5 1358 aa15.51■□□□□ 0.07
HDLBP-237ENST00000479169 MSH5O43196 834 aa15.51■□□□□ 0.07
HDLBP-237ENST00000479169 COL23A1Q86Y22 540 aaPredicted RBP15.51■□□□□ 0.07
HDLBP-237ENST00000479169 USP47Q96K76 1375 aa15.5■□□□□ 0.07
HDLBP-237ENST00000479169 ITGB4P16144 1822 aa15.5■□□□□ 0.07
HDLBP-237ENST00000479169 YBX3P16989 372 aaKnown RBP eCLIP15.5■□□□□ 0.072e-8■■□□□ 13.8
HDLBP-237ENST00000479169 MSL1Q68DK7 614 aa15.5■□□□□ 0.07
HDLBP-237ENST00000479169 GGNBP2Q9H3C7 697 aa15.5■□□□□ 0.07
HDLBP-237ENST00000479169 TOGARAM1Q9Y4F4 1720 aa15.49■□□□□ 0.07
HDLBP-237ENST00000479169 FYB1O15117 783 aa15.48■□□□□ 0.07
HDLBP-237ENST00000479169 GIGYF1O75420 1035 aaPredicted RBP15.48■□□□□ 0.07
HDLBP-237ENST00000479169 SMG6Q86US8 1419 aaKnown RBP15.47■□□□□ 0.07
HDLBP-237ENST00000479169 RAPGEF4Q8WZA2 1011 aa15.47■□□□□ 0.07
HDLBP-237ENST00000479169 CGNL1Q0VF96 1302 aa15.45■□□□□ 0.06
HDLBP-237ENST00000479169 TATP17735 454 aaPredicted RBP15.45■□□□□ 0.06
HDLBP-237ENST00000479169 HSP90AB2PQ58FF8 381 aa15.45■□□□□ 0.06
HDLBP-237ENST00000479169 UBR3Q6ZT12 1888 aa15.45■□□□□ 0.06
HDLBP-237ENST00000479169 C4BP0C0L5 1744 aa15.45■□□□□ 0.06
HDLBP-237ENST00000479169 PKD1L3Q7Z443 1732 aa15.45■□□□□ 0.06
HDLBP-237ENST00000479169 INSRP06213 1382 aa15.44■□□□□ 0.06
HDLBP-237ENST00000479169 PALLDQ8WX93 1383 aa15.44■□□□□ 0.06
HDLBP-237ENST00000479169 PCDH11XQ9BZA7 1347 aa15.43■□□□□ 0.06
HDLBP-237ENST00000479169 PCDH11YQ9BZA8 1340 aa15.43■□□□□ 0.06
HDLBP-237ENST00000479169 CYP27B1O15528 508 aa15.43■□□□□ 0.06
HDLBP-237ENST00000479169 GRIN3BO60391 1043 aa15.43■□□□□ 0.06
HDLBP-237ENST00000479169 MPRIPQ6WCQ1 1025 aa15.43■□□□□ 0.06
HDLBP-237ENST00000479169 FLT4P35916 1363 aa15.43■□□□□ 0.06
HDLBP-237ENST00000479169 SMIM5Q71RC9 77 aa15.42■□□□□ 0.06
HDLBP-237ENST00000479169 AMIGO3Q86WK7 504 aa15.42■□□□□ 0.06
HDLBP-237ENST00000479169 MAP2P11137 1827 aaKnown RBP15.42■□□□□ 0.06
HDLBP-237ENST00000479169 SLC24A1O60721 1099 aa15.41■□□□□ 0.06
HDLBP-237ENST00000479169 TMF1P82094 1093 aa15.41■□□□□ 0.06
HDLBP-237ENST00000479169 ATP10DQ9P241 1426 aa15.41■□□□□ 0.06
HDLBP-237ENST00000479169 ANKRD26Q9UPS8 1709 aa15.4■□□□□ 0.06
HDLBP-237ENST00000479169 EMILIN1Q9Y6C2 1016 aa15.4■□□□□ 0.06
HDLBP-237ENST00000479169 CD2APQ9Y5K6 639 aa15.39■□□□□ 0.05
HDLBP-237ENST00000479169 KIF24Q5T7B8 1368 aa15.38■□□□□ 0.05
HDLBP-237ENST00000479169 PHF14O94880 888 aa15.38■□□□□ 0.05
HDLBP-237ENST00000479169 FLAD1Q8NFF5 587 aa15.38■□□□□ 0.05
HDLBP-237ENST00000479169 PIGBQ92521 554 aa15.38■□□□□ 0.05
HDLBP-237ENST00000479169 AK7Q96M32 723 aa15.38■□□□□ 0.05
HDLBP-237ENST00000479169 CARD14Q9BXL6 1004 aa15.38■□□□□ 0.05
HDLBP-237ENST00000479169 WWC3Q9ULE0 1092 aa15.38■□□□□ 0.05
HDLBP-237ENST00000479169 NCAPD2Q15021 1401 aa15.37■□□□□ 0.05
HDLBP-237ENST00000479169 NSD3Q9BZ95 1437 aa15.37■□□□□ 0.05
HDLBP-237ENST00000479169 SMARCC1Q92922 1105 aaPredicted RBP15.37■□□□□ 0.05
HDLBP-237ENST00000479169 ADCY9O60503 1353 aa15.36■□□□□ 0.05
HDLBP-237ENST00000479169 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.35■□□□□ 0.05
HDLBP-237ENST00000479169 PPM1GO15355 546 aaPredicted RBP15.35■□□□□ 0.05
HDLBP-237ENST00000479169 LINC00116Q8NCU8 138 aa15.35■□□□□ 0.05
HDLBP-237ENST00000479169 ZNF526Q8TF50 670 aaPredicted RBP15.35■□□□□ 0.05
HDLBP-237ENST00000479169 IGSF1Q8N6C5 1336 aa15.35■□□□□ 0.05
HDLBP-237ENST00000479169 LOC102724428A0A0B4J2F2 783 aa15.33■□□□□ 0.04
HDLBP-237ENST00000479169 SIK1P57059 783 aa15.33■□□□□ 0.04
HDLBP-237ENST00000479169 NKX1-1Q15270 411 aaPredicted RBP15.33■□□□□ 0.04
HDLBP-237ENST00000479169 GPBP1L1Q9HC44 474 aaPredicted RBP15.33■□□□□ 0.04
HDLBP-237ENST00000479169 HMGB2P26583 209 aaKnown RBP15.32■□□□□ 0.04
HDLBP-237ENST00000479169 ITPK1Q13572 414 aa15.32■□□□□ 0.04
HDLBP-237ENST00000479169 CDCA8Q53HL2 280 aa15.32■□□□□ 0.04
HDLBP-237ENST00000479169 EYA1Q99502 592 aa15.32■□□□□ 0.04
HDLBP-237ENST00000479169 ASAP1Q9ULH1 1129 aa15.32■□□□□ 0.04
HDLBP-237ENST00000479169 SPG7Q9UQ90 795 aa15.32■□□□□ 0.04
HDLBP-237ENST00000479169 N4BP2Q86UW6 1770 aaPredicted RBP15.31■□□□□ 0.04
HDLBP-237ENST00000479169 GNPATO15228 680 aa15.31■□□□□ 0.04
HDLBP-237ENST00000479169 SSFA2P28290 1259 aa15.31■□□□□ 0.04
HDLBP-237ENST00000479169 TMOD3Q9NYL9 352 aa15.31■□□□□ 0.04
HDLBP-237ENST00000479169 KIAA1551Q9HCM1 1747 aa15.31■□□□□ 0.04
HDLBP-237ENST00000479169 KIF13BQ9NQT8 1826 aa15.31■□□□□ 0.04
HDLBP-237ENST00000479169 WASHC2AQ641Q2 1341 aa15.3■□□□□ 0.04
HDLBP-237ENST00000479169 PHKG2P15735 406 aa15.28■□□□□ 0.04
HDLBP-237ENST00000479169 ATP6V1AP38606 617 aa15.28■□□□□ 0.04
HDLBP-237ENST00000479169 POLKQ9UBT6 870 aa15.28■□□□□ 0.04
HDLBP-237ENST00000479169 CICQ96RK0 1608 aaPredicted RBP15.28■□□□□ 0.04
HDLBP-237ENST00000479169 COL5A3P25940 1745 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms