RNA–Protein interactions for RNA: ENST00000479162.5

NUP35-209, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 2,828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-209ENST00000479162 FANCAO15360 1455 aa12.59□□□□□ -0.39
NUP35-209ENST00000479162 FAM135AQ9P2D6 1515 aa12.58□□□□□ -0.39
NUP35-209ENST00000479162 ANKRD18BA2A2Z9 1011 aa12.58□□□□□ -0.4
NUP35-209ENST00000479162 CCP110O43303 1012 aa12.58□□□□□ -0.4
NUP35-209ENST00000479162 FAM69CQ0P6D2 419 aa12.58□□□□□ -0.4
NUP35-209ENST00000479162 MCTP2Q6DN12 878 aa12.58□□□□□ -0.4
NUP35-209ENST00000479162 CADPS2Q86UW7 1296 aa12.58□□□□□ -0.4
NUP35-209ENST00000479162 INO80Q9ULG1 1556 aaPredicted RBP12.58□□□□□ -0.4
NUP35-209ENST00000479162 TRIM66O15016 1216 aa12.58□□□□□ -0.4
NUP35-209ENST00000479162 TPD52L2O43399 206 aaKnown RBP12.58□□□□□ -0.4
NUP35-209ENST00000479162 GET4Q7L5D6 327 aaPredicted RBP12.58□□□□□ -0.4
NUP35-209ENST00000479162 SUGP1Q8IWZ8 645 aaKnown RBP12.58□□□□□ -0.4
NUP35-209ENST00000479162 NME8Q8N427 588 aa12.58□□□□□ -0.4
NUP35-209ENST00000479162 MAF1Q9H063 256 aa12.58□□□□□ -0.4
NUP35-209ENST00000479162 IBTKQ9P2D0 1353 aaPredicted RBP12.58□□□□□ -0.4
NUP35-209ENST00000479162 SYT10Q6XYQ8 523 aa12.57□□□□□ -0.4
NUP35-209ENST00000479162 BRD1O95696 1058 aa12.57□□□□□ -0.4
NUP35-209ENST00000479162 E2F4Q16254 413 aa12.57□□□□□ -0.4
NUP35-209ENST00000479162 ZNF280DQ6N043 979 aa12.57□□□□□ -0.4
NUP35-209ENST00000479162 HIRIP3Q9BW71 556 aaPredicted RBP12.57□□□□□ -0.4
NUP35-209ENST00000479162 DIAPH3Q9NSV4 1193 aa12.57□□□□□ -0.4
NUP35-209ENST00000479162 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.57□□□□□ -0.4
NUP35-209ENST00000479162 POGZQ7Z3K3 1410 aa12.57□□□□□ -0.4
NUP35-209ENST00000479162 SETSIPP0DME0 302 aa12.57□□□□□ -0.4
NUP35-209ENST00000479162 NAP1L1P55209 391 aaKnown RBP12.57□□□□□ -0.4
NUP35-209ENST00000479162 MFSD4BQ5TF39 518 aa12.57□□□□□ -0.4
NUP35-209ENST00000479162 TTC19Q6DKK2 380 aaPredicted RBP12.57□□□□□ -0.4
NUP35-209ENST00000479162 KCTD17Q8N5Z5 321 aa12.57□□□□□ -0.4
NUP35-209ENST00000479162 HECW2Q9P2P5 1572 aa12.56□□□□□ -0.4
NUP35-209ENST00000479162 SHANK2Q9UPX8 1470 aa12.56□□□□□ -0.4
NUP35-209ENST00000479162 PAX3P23760 479 aa12.56□□□□□ -0.4
NUP35-209ENST00000479162 SKAP1Q86WV1 359 aa12.56□□□□□ -0.4
NUP35-209ENST00000479162 MRS2Q9HD23 443 aa12.56□□□□□ -0.4
NUP35-209ENST00000479162 ZNF446Q9NWS9 450 aa12.56□□□□□ -0.4
NUP35-209ENST00000479162 ARHGAP5Q13017 1502 aa12.56□□□□□ -0.4
NUP35-209ENST00000479162 SKILP12757 684 aa12.56□□□□□ -0.4
NUP35-209ENST00000479162 AP1ARQ63HQ0 302 aa12.56□□□□□ -0.4
NUP35-209ENST00000479162 RANBP17Q9H2T7 1088 aaKnown RBP12.56□□□□□ -0.4
NUP35-209ENST00000479162 CWC15Q9P013 229 aaKnown RBP12.56□□□□□ -0.4
NUP35-209ENST00000479162 MTUS2Q5JR59 1369 aa12.56□□□□□ -0.4
NUP35-209ENST00000479162 CEP89Q96ST8 783 aa12.55□□□□□ -0.4
NUP35-209ENST00000479162 MLH3Q9UHC1 1453 aa12.55□□□□□ -0.4
NUP35-209ENST00000479162 ADGBQ8N7X0 1667 aa12.55□□□□□ -0.4
NUP35-209ENST00000479162 CTIFO43310 598 aaKnown RBP12.55□□□□□ -0.4
NUP35-209ENST00000479162 SYCP1Q15431 976 aa12.55□□□□□ -0.4
NUP35-209ENST00000479162 DENND4BO75064 1496 aaPredicted RBP12.55□□□□□ -0.4
NUP35-209ENST00000479162 ZNF518AQ6AHZ1 1483 aa12.55□□□□□ -0.4
NUP35-209ENST00000479162 PLXNC1O60486 1568 aa12.55□□□□□ -0.4
NUP35-209ENST00000479162 TRIM74Q86UV6 250 aa12.54□□□□□ -0.4
NUP35-209ENST00000479162 TRIM73Q86UV7 250 aa12.54□□□□□ -0.4
NUP35-209ENST00000479162 ZNF232Q9UNY5 417 aa12.54□□□□□ -0.4
NUP35-209ENST00000479162 MYOM3Q5VTT5 1437 aa12.54□□□□□ -0.4
NUP35-209ENST00000479162 KINO60870 393 aaKnown RBP12.54□□□□□ -0.4
NUP35-209ENST00000479162 CCDC184Q52MB2 194 aa12.54□□□□□ -0.4
NUP35-209ENST00000479162 TXLNBQ8N3L3 684 aa12.54□□□□□ -0.4
NUP35-209ENST00000479162 KIF18AQ8NI77 898 aa12.54□□□□□ -0.4
NUP35-209ENST00000479162 MTA3Q9BTC8 594 aa12.54□□□□□ -0.4
NUP35-209ENST00000479162 ATG3Q9NT62 314 aa12.54□□□□□ -0.4
NUP35-209ENST00000479162 PHF8Q9UPP1 1060 aa12.54□□□□□ -0.4
NUP35-209ENST00000479162 PES1O00541 588 aaKnown RBP12.53□□□□□ -0.4
NUP35-209ENST00000479162 ADCY2Q08462 1091 aa12.53□□□□□ -0.4
NUP35-209ENST00000479162 TATDN2Q93075 761 aa12.53□□□□□ -0.4
NUP35-209ENST00000479162 RTEL1-TNFRSF6BF6WH68 1400 aa12.53□□□□□ -0.4
NUP35-209ENST00000479162 PPFIA2O75334 1257 aa12.53□□□□□ -0.4
NUP35-209ENST00000479162 ECEL1O95672 775 aa12.53□□□□□ -0.4
NUP35-209ENST00000479162 FAM163BP0C2L3 166 aa12.53□□□□□ -0.4
NUP35-209ENST00000479162 ADRA2BP18089 450 aa12.53□□□□□ -0.4
NUP35-209ENST00000479162 DNMT1P26358 1616 aaKnown RBP12.53□□□□□ -0.4
NUP35-209ENST00000479162 EIF3JO75822 258 aaKnown RBP12.52□□□□□ -0.4
NUP35-209ENST00000479162 GOPCQ9HD26 462 aa12.52□□□□□ -0.4
NUP35-209ENST00000479162 AGLP35573 1532 aa12.52□□□□□ -0.4
NUP35-209ENST00000479162 ADGRL1O94910 1474 aa12.52□□□□□ -0.4
NUP35-209ENST00000479162 USP19O94966 1318 aa12.52□□□□□ -0.41
NUP35-209ENST00000479162 WWC2Q6AWC2 1192 aa12.52□□□□□ -0.41
NUP35-209ENST00000479162 ZCRB1Q8TBF4 217 aaKnown RBP12.52□□□□□ -0.41
NUP35-209ENST00000479162 RMI1Q9H9A7 625 aa12.52□□□□□ -0.41
NUP35-209ENST00000479162 CPSF2Q9P2I0 782 aaKnown RBP12.52□□□□□ -0.41
NUP35-209ENST00000479162 PTPN23Q9H3S7 1636 aa12.52□□□□□ -0.41
NUP35-209ENST00000479162 ERCC3P19447 782 aa12.52□□□□□ -0.41
NUP35-209ENST00000479162 MAGEA8P43361 318 aa12.52□□□□□ -0.41
NUP35-209ENST00000479162 TRAF1Q13077 416 aa12.52□□□□□ -0.41
NUP35-209ENST00000479162 NAIF1Q69YI7 327 aaPredicted RBP12.52□□□□□ -0.41
NUP35-209ENST00000479162 NFATC2IPQ8NCF5 419 aa12.52□□□□□ -0.41
NUP35-209ENST00000479162 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.52□□□□□ -0.41
NUP35-209ENST00000479162 VIRMAQ69YN4 1812 aaKnown RBP12.51□□□□□ -0.41
NUP35-209ENST00000479162 EIF2AK4Q9P2K8 1649 aaKnown RBP12.51□□□□□ -0.41
NUP35-209ENST00000479162 SCAPERQ9BY12 1400 aa12.51□□□□□ -0.41
NUP35-209ENST00000479162 KANK1Q14678 1352 aa12.51□□□□□ -0.41
NUP35-209ENST00000479162 PACS2Q86VP3 889 aa12.51□□□□□ -0.41
NUP35-209ENST00000479162 KCNV2Q8TDN2 545 aa12.51□□□□□ -0.41
NUP35-209ENST00000479162 PIBF1Q8WXW3 757 aa12.51□□□□□ -0.41
NUP35-209ENST00000479162 ZNF396Q96N95 335 aaPredicted RBP12.51□□□□□ -0.41
NUP35-209ENST00000479162 GBP4Q96PP9 640 aa12.51□□□□□ -0.41
NUP35-209ENST00000479162 ZFYVE16Q7Z3T8 1539 aa12.51□□□□□ -0.41
NUP35-209ENST00000479162 CCNB3Q8WWL7 1395 aa12.5□□□□□ -0.41
NUP35-209ENST00000479162 FOXD4Q12950 439 aaPredicted RBP12.5□□□□□ -0.41
NUP35-209ENST00000479162 RABEP1Q15276 862 aa12.5□□□□□ -0.41
NUP35-209ENST00000479162 SRLQ86TD4 932 aa12.5□□□□□ -0.41
NUP35-209ENST00000479162 MICALL1Q8N3F8 863 aa12.5□□□□□ -0.41
NUP35-209ENST00000479162 TBC1D2Q9BYX2 928 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms