RNA–Protein interactions for RNA: ENST00000478954.1

STRADBP1-201, Transcript of STE20-related kinase adaptor beta pseudogene 1, humanhuman

BASIC

Gene STRADBP1, Length 1,281 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBP1-201ENST00000478954 ARID5BQ14865 1188 aa9.28□□□□□ -0.92
STRADBP1-201ENST00000478954 LAPTM4AQ15012 233 aa9.28□□□□□ -0.92
STRADBP1-201ENST00000478954 SLC10A4Q96EP9 437 aa9.28□□□□□ -0.92
STRADBP1-201ENST00000478954 CDK15Q96Q40 435 aa9.28□□□□□ -0.92
STRADBP1-201ENST00000478954 PCDHB9Q9Y5E1 797 aa9.28□□□□□ -0.92
STRADBP1-201ENST00000478954 CFTRP13569 1480 aa9.28□□□□□ -0.92
STRADBP1-201ENST00000478954 TTC24A2A3L6 582 aaPredicted RBP9.27□□□□□ -0.93
STRADBP1-201ENST00000478954 LMOD1P29536 600 aaPredicted RBP9.27□□□□□ -0.93
STRADBP1-201ENST00000478954 TFIP11Q9UBB9 837 aaKnown RBP9.27□□□□□ -0.93
STRADBP1-201ENST00000478954 GRM5P41594 1212 aa9.26□□□□□ -0.93
STRADBP1-201ENST00000478954 CDCA8Q53HL2 280 aa9.26□□□□□ -0.93
STRADBP1-201ENST00000478954 MPNDQ8N594 471 aa9.26□□□□□ -0.93
STRADBP1-201ENST00000478954 MAP4K5Q9Y4K4 846 aa9.26□□□□□ -0.93
STRADBP1-201ENST00000478954 SYNJ1O43426 1573 aa9.25□□□□□ -0.93
STRADBP1-201ENST00000478954 FAM187AA6NFU0 413 aa9.25□□□□□ -0.93
STRADBP1-201ENST00000478954 TMEM88BA6NKF7 163 aa9.25□□□□□ -0.93
STRADBP1-201ENST00000478954 ADH1CP00326 375 aa9.25□□□□□ -0.93
STRADBP1-201ENST00000478954 NR3C2P08235 984 aa9.25□□□□□ -0.93
STRADBP1-201ENST00000478954 FSHRP23945 695 aa9.25□□□□□ -0.93
STRADBP1-201ENST00000478954 VASH1Q7L8A9 365 aaPredicted RBP9.25□□□□□ -0.93
STRADBP1-201ENST00000478954 DZIP3Q86Y13 1208 aaKnown RBP9.25□□□□□ -0.93
STRADBP1-201ENST00000478954 IVNS1ABPQ9Y6Y0 642 aa9.25□□□□□ -0.93
STRADBP1-201ENST00000478954 MROH2BQ7Z745 1585 aa9.24□□□□□ -0.93
STRADBP1-201ENST00000478954 TRAF7Q6Q0C0 670 aa9.23□□□□□ -0.93
STRADBP1-201ENST00000478954 HPS1Q92902 700 aa9.23□□□□□ -0.93
STRADBP1-201ENST00000478954 KCTD15Q96SI1 283 aaPredicted RBP9.23□□□□□ -0.93
STRADBP1-201ENST00000478954 VRTNQ9H8Y1 702 aa9.23□□□□□ -0.93
STRADBP1-201ENST00000478954 TARBP1Q13395 1621 aaKnown RBP9.23□□□□□ -0.93
STRADBP1-201ENST00000478954 ATG7O95352 703 aa9.22□□□□□ -0.93
STRADBP1-201ENST00000478954 NNTQ13423 1086 aa9.22□□□□□ -0.93
STRADBP1-201ENST00000478954 INTS6LQ5JSJ4 861 aaKnown RBP9.22□□□□□ -0.93
STRADBP1-201ENST00000478954 WASF2Q9Y6W5 498 aa9.22□□□□□ -0.93
STRADBP1-201ENST00000478954 PRDM2Q13029 1718 aa9.22□□□□□ -0.93
STRADBP1-201ENST00000478954 ESPNB1AK53 854 aa9.21□□□□□ -0.94
STRADBP1-201ENST00000478954 GIGYF1O75420 1035 aaPredicted RBP9.21□□□□□ -0.94
STRADBP1-201ENST00000478954 TBC1D9Q6ZT07 1266 aa9.21□□□□□ -0.94
STRADBP1-201ENST00000478954 MAFBQ9Y5Q3 323 aaPredicted RBP9.21□□□□□ -0.94
STRADBP1-201ENST00000478954 TSPOAP1O95153 1857 aa9.21□□□□□ -0.94
STRADBP1-201ENST00000478954 RAB15P59190 212 aa9.2□□□□□ -0.94
STRADBP1-201ENST00000478954 EIF4G2P78344 907 aaKnown RBP eCLIP9.2□□□□□ -0.94
STRADBP1-201ENST00000478954 CDV3Q9UKY7 258 aaKnown RBP9.2□□□□□ -0.94
STRADBP1-201ENST00000478954 TOPBP1Q92547 1522 aa9.2□□□□□ -0.94
STRADBP1-201ENST00000478954 NBPF20Q3BBV1 942 aa9.19□□□□□ -0.94
STRADBP1-201ENST00000478954 SPATA31D1Q6ZQQ2 1576 aa9.19□□□□□ -0.94
STRADBP1-201ENST00000478954 SOX11P35716 441 aa9.18□□□□□ -0.94
STRADBP1-201ENST00000478954 NR5A1Q13285 461 aa9.18□□□□□ -0.94
STRADBP1-201ENST00000478954 CCDC27Q2M243 656 aa9.18□□□□□ -0.94
STRADBP1-201ENST00000478954 PKDCCQ504Y2 493 aa9.18□□□□□ -0.94
STRADBP1-201ENST00000478954 SND1Q7KZF4 910 aaKnown RBP eCLIP9.18□□□□□ -0.94
STRADBP1-201ENST00000478954 KLF16Q9BXK1 252 aaPredicted RBP9.18□□□□□ -0.94
STRADBP1-201ENST00000478954 CEP126Q9P2H0 1117 aa9.18□□□□□ -0.94
STRADBP1-201ENST00000478954 PIK3CDO00329 1044 aa9.17□□□□□ -0.94
STRADBP1-201ENST00000478954 DGAT1O75907 488 aa9.17□□□□□ -0.94
STRADBP1-201ENST00000478954 AVPP01185 164 aa9.17□□□□□ -0.94
STRADBP1-201ENST00000478954 SEMA3FQ13275 785 aa9.17□□□□□ -0.94
STRADBP1-201ENST00000478954 CCDC116Q8IYX3 515 aa9.17□□□□□ -0.94
STRADBP1-201ENST00000478954 TMPRSS4Q9NRS4 437 aa9.17□□□□□ -0.94
STRADBP1-201ENST00000478954 ABCC10Q5T3U5 1492 aa9.16□□□□□ -0.94
STRADBP1-201ENST00000478954 LOC105371045A0A1W2PR82 267 aa9.16□□□□□ -0.94
STRADBP1-201ENST00000478954 IGSF3O75054 1194 aa9.16□□□□□ -0.94
STRADBP1-201ENST00000478954 TIMP2P16035 220 aa9.16□□□□□ -0.94
STRADBP1-201ENST00000478954 FAM69CQ0P6D2 419 aa9.16□□□□□ -0.94
STRADBP1-201ENST00000478954 PPP1R26Q5T8A7 1209 aaPredicted RBP9.16□□□□□ -0.94
STRADBP1-201ENST00000478954 ITPKCQ96DU7 683 aa9.16□□□□□ -0.94
STRADBP1-201ENST00000478954 CCDC85AQ96PX6 553 aaPredicted RBP9.16□□□□□ -0.94
STRADBP1-201ENST00000478954 DIP2BQ9P265 1576 aa9.16□□□□□ -0.94
STRADBP1-201ENST00000478954 SNAPC4Q5SXM2 1469 aa9.15□□□□□ -0.94
STRADBP1-201ENST00000478954 E9PSI1 815 aa9.15□□□□□ -0.94
STRADBP1-201ENST00000478954 ERVH48-1M5A8F1 160 aa9.15□□□□□ -0.94
STRADBP1-201ENST00000478954 ST8SIA5O15466 376 aa9.15□□□□□ -0.94
STRADBP1-201ENST00000478954 MYT1Q01538 1121 aa9.15□□□□□ -0.94
STRADBP1-201ENST00000478954 TSGA10IPQ3SY00 556 aa9.15□□□□□ -0.94
STRADBP1-201ENST00000478954 PHTF2Q8N3S3 785 aa9.15□□□□□ -0.94
STRADBP1-201ENST00000478954 ZFAND3Q9H8U3 227 aa9.15□□□□□ -0.94
STRADBP1-201ENST00000478954 ATP9BO43861 1147 aa9.14□□□□□ -0.95
STRADBP1-201ENST00000478954 WDR4P57081 412 aaKnown RBP9.14□□□□□ -0.95
STRADBP1-201ENST00000478954 MCCD1P59942 119 aaPredicted RBP9.14□□□□□ -0.95
STRADBP1-201ENST00000478954 KANK4Q5T7N3 995 aaPredicted RBP9.14□□□□□ -0.95
STRADBP1-201ENST00000478954 ZIC2O95409 532 aaPredicted RBP9.13□□□□□ -0.95
STRADBP1-201ENST00000478954 ZMIZ1Q9ULJ6 1067 aa9.13□□□□□ -0.95
STRADBP1-201ENST00000478954 GNEQ9Y223 722 aaKnown RBP9.13□□□□□ -0.95
STRADBP1-201ENST00000478954 AMOTL2Q9Y2J4 779 aa9.13□□□□□ -0.95
STRADBP1-201ENST00000478954 WIZO95785 1651 aa9.13□□□□□ -0.95
STRADBP1-201ENST00000478954 SEPT12Q8IYM1 358 aa9.12□□□□□ -0.95
STRADBP1-201ENST00000478954 ZNF784Q8NCA9 323 aaPredicted RBP9.12□□□□□ -0.95
STRADBP1-201ENST00000478954 ZNF592Q92610 1267 aa9.12□□□□□ -0.95
STRADBP1-201ENST00000478954 CDCA7Q9BWT1 371 aaPredicted RBP9.12□□□□□ -0.95
STRADBP1-201ENST00000478954 DACH1Q9UI36 760 aa9.12□□□□□ -0.95
STRADBP1-201ENST00000478954 RNF135Q8IUD6 432 aa9.11□□□□□ -0.95
STRADBP1-201ENST00000478954 CHMP7Q8WUX9 453 aaPredicted RBP9.11□□□□□ -0.95
STRADBP1-201ENST00000478954 AAASQ9NRG9 546 aa9.11□□□□□ -0.95
STRADBP1-201ENST00000478954 CHIC2Q9UKJ5 165 aa9.11□□□□□ -0.95
STRADBP1-201ENST00000478954 LILRA1O75019 489 aa9.1□□□□□ -0.95
STRADBP1-201ENST00000478954 SCTRP47872 440 aa9.1□□□□□ -0.95
STRADBP1-201ENST00000478954 SMCPP49901 116 aaPredicted RBP9.1□□□□□ -0.95
STRADBP1-201ENST00000478954 CBLBQ13191 982 aa9.1□□□□□ -0.95
STRADBP1-201ENST00000478954 SLFNL1Q499Z3 407 aa9.1□□□□□ -0.95
STRADBP1-201ENST00000478954 TMEM164Q5U3C3 297 aa9.1□□□□□ -0.95
STRADBP1-201ENST00000478954 CRIPAKQ8N1N5 446 aa9.1□□□□□ -0.95
STRADBP1-201ENST00000478954 STK32AQ8WU08 396 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms