RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 TRPC5Q9UL62 973 aaPredicted RBP6.03□□□□□ -1.44
POLR2B-208ENST00000478188 PCDHB8Q9UN66 801 aa6.03□□□□□ -1.44
POLR2B-208ENST00000478188 AATKQ6ZMQ8 1374 aa6.03□□□□□ -1.44
POLR2B-208ENST00000478188 RTN4Q9NQC3 1192 aaKnown RBP6.03□□□□□ -1.44
POLR2B-208ENST00000478188 SPATA31A5Q5VU36 1347 aa6.03□□□□□ -1.44
POLR2B-208ENST00000478188 SPATA31A7Q8IWB4 1347 aa6.03□□□□□ -1.44
POLR2B-208ENST00000478188 KTN1Q86UP2 1357 aaKnown RBP6.03□□□□□ -1.44
POLR2B-208ENST00000478188 NUP188Q5SRE5 1749 aa6.03□□□□□ -1.44
POLR2B-208ENST00000478188 GOLGA2Q08379 1002 aa6.02□□□□□ -1.44
POLR2B-208ENST00000478188 NGLY1Q96IV0 654 aa6.02□□□□□ -1.44
POLR2B-208ENST00000478188 GJD4Q96KN9 370 aaPredicted RBP6.02□□□□□ -1.44
POLR2B-208ENST00000478188 CHRM1P11229 460 aaPredicted RBP6.02□□□□□ -1.45
POLR2B-208ENST00000478188 CIZ1Q9ULV3 898 aaPredicted RBP6.02□□□□□ -1.45
POLR2B-208ENST00000478188 PKD1L3Q7Z443 1732 aa6.02□□□□□ -1.45
POLR2B-208ENST00000478188 NCAPD2Q15021 1401 aa6.02□□□□□ -1.45
POLR2B-208ENST00000478188 OCEL1Q9H607 264 aa6.02□□□□□ -1.45
POLR2B-208ENST00000478188 NHSQ6T4R5 1651 aa6.02□□□□□ -1.45
POLR2B-208ENST00000478188 SPATA31A1Q5TZJ5 1347 aa6.01□□□□□ -1.45
POLR2B-208ENST00000478188 SLC12A5Q9H2X9 1139 aa6.01□□□□□ -1.45
POLR2B-208ENST00000478188 MAP2P11137 1827 aaKnown RBP6.01□□□□□ -1.45
POLR2B-208ENST00000478188 GCP02774 474 aa6.01□□□□□ -1.45
POLR2B-208ENST00000478188 NUTM2GQ5VZR2 741 aa6□□□□□ -1.45
POLR2B-208ENST00000478188 ARHGEF25Q86VW2 580 aa6□□□□□ -1.45
POLR2B-208ENST00000478188 CRB1P82279 1406 aa6□□□□□ -1.45
POLR2B-208ENST00000478188 SMG6Q86US8 1419 aaKnown RBP6□□□□□ -1.45
POLR2B-208ENST00000478188 IRX5P78411 483 aaPredicted RBP6□□□□□ -1.45
POLR2B-208ENST00000478188 BTG4Q9NY30 223 aa6□□□□□ -1.45
POLR2B-208ENST00000478188 BLMP54132 1417 aaPredicted RBP6□□□□□ -1.45
POLR2B-208ENST00000478188 TOGARAM1Q9Y4F4 1720 aa6□□□□□ -1.45
POLR2B-208ENST00000478188 NME9Q86XW9 330 aa6□□□□□ -1.45
POLR2B-208ENST00000478188 ABTB2Q8N961 1025 aa6□□□□□ -1.45
POLR2B-208ENST00000478188 CARD14Q9BXL6 1004 aa6□□□□□ -1.45
POLR2B-208ENST00000478188 AXIN2Q9Y2T1 843 aa6□□□□□ -1.45
POLR2B-208ENST00000478188 CHD4Q14839 1912 aa6□□□□□ -1.45
POLR2B-208ENST00000478188 PAPPAQ13219 1627 aa5.99□□□□□ -1.45
POLR2B-208ENST00000478188 C11orf95C9JLR9 678 aaPredicted RBP5.99□□□□□ -1.45
POLR2B-208ENST00000478188 BCL9O00512 1426 aa5.99□□□□□ -1.45
POLR2B-208ENST00000478188 MKRN3Q13064 507 aaKnown RBP5.99□□□□□ -1.45
POLR2B-208ENST00000478188 CHRNA2Q15822 529 aa5.99□□□□□ -1.45
POLR2B-208ENST00000478188 SLAIN1Q8ND83 568 aa5.99□□□□□ -1.45
POLR2B-208ENST00000478188 NLRP13Q86W25 1043 aa5.99□□□□□ -1.45
POLR2B-208ENST00000478188 HSPA5P11021 654 aaKnown RBP5.98□□□□□ -1.45
POLR2B-208ENST00000478188 BARGINQ6ZT62 677 aa5.98□□□□□ -1.45
POLR2B-208ENST00000478188 NSD3Q9BZ95 1437 aa5.98□□□□□ -1.45
POLR2B-208ENST00000478188 DOT1LQ8TEK3 1739 aa5.98□□□□□ -1.45
POLR2B-208ENST00000478188 ZC3H6P61129 1189 aaKnown RBP5.98□□□□□ -1.45
POLR2B-208ENST00000478188 LMOD2Q6P5Q4 547 aa5.97□□□□□ -1.45
POLR2B-208ENST00000478188 LARP1Q6PKG0 1096 aaKnown RBP5.97□□□□□ -1.45
POLR2B-208ENST00000478188 PRDM11Q9NQV5 511 aa5.97□□□□□ -1.45
POLR2B-208ENST00000478188 RTL1A6NKG5 1358 aa5.97□□□□□ -1.45
POLR2B-208ENST00000478188 LY75O60449 1722 aa5.97□□□□□ -1.45
POLR2B-208ENST00000478188 COL24A1Q17RW2 1714 aa5.97□□□□□ -1.45
POLR2B-208ENST00000478188 TNS2Q63HR2 1409 aa5.97□□□□□ -1.45
POLR2B-208ENST00000478188 CASZ1Q86V15 1759 aa5.97□□□□□ -1.45
POLR2B-208ENST00000478188 NLRP6P59044 892 aa5.97□□□□□ -1.45
POLR2B-208ENST00000478188 TMF1P82094 1093 aa5.97□□□□□ -1.45
POLR2B-208ENST00000478188 SEPT12Q8IYM1 358 aa5.97□□□□□ -1.45
POLR2B-208ENST00000478188 BTAF1O14981 1849 aa5.97□□□□□ -1.45
POLR2B-208ENST00000478188 QSER1Q2KHR3 1735 aa5.97□□□□□ -1.45
POLR2B-208ENST00000478188 WDR17Q8IZU2 1322 aa5.97□□□□□ -1.45
POLR2B-208ENST00000478188 VIRMAQ69YN4 1812 aaKnown RBP5.97□□□□□ -1.45
POLR2B-208ENST00000478188 TUBGCP6Q96RT7 1819 aa5.97□□□□□ -1.45
POLR2B-208ENST00000478188 PSEN1P49768 467 aa5.97□□□□□ -1.45
POLR2B-208ENST00000478188 CCER1Q8TC90 406 aaPredicted RBP5.97□□□□□ -1.45
POLR2B-208ENST00000478188 FYB1O15117 783 aa5.96□□□□□ -1.45
POLR2B-208ENST00000478188 SLC24A1O60721 1099 aa5.96□□□□□ -1.45
POLR2B-208ENST00000478188 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.96□□□□□ -1.45
POLR2B-208ENST00000478188 ERBB3P21860 1342 aa5.96□□□□□ -1.46
POLR2B-208ENST00000478188 KCNH5Q8NCM2 988 aa5.96□□□□□ -1.46
POLR2B-208ENST00000478188 TERF2IPQ9NYB0 399 aa5.96□□□□□ -1.46
POLR2B-208ENST00000478188 ADAMTS7Q9UKP4 1686 aa5.96□□□□□ -1.46
POLR2B-208ENST00000478188 MEGF6O75095 1541 aa5.96□□□□□ -1.46
POLR2B-208ENST00000478188 ECM2O94769 699 aaPredicted RBP5.95□□□□□ -1.46
POLR2B-208ENST00000478188 PDAP1Q13442 181 aaKnown RBP5.95□□□□□ -1.46
POLR2B-208ENST00000478188 FAM98CQ17RN3 349 aaKnown RBP5.95□□□□□ -1.46
POLR2B-208ENST00000478188 HDGFL2Q7Z4V5 671 aaPredicted RBP5.95□□□□□ -1.46
POLR2B-208ENST00000478188 THRAP3Q9Y2W1 955 aaKnown RBP5.95□□□□□ -1.46
POLR2B-208ENST00000478188 ITGB4P16144 1822 aa5.95□□□□□ -1.46
POLR2B-208ENST00000478188 KIF24Q5T7B8 1368 aa5.95□□□□□ -1.46
POLR2B-208ENST00000478188 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.95□□□□□ -1.46
POLR2B-208ENST00000478188 L3MBTL3Q96JM7 780 aaPredicted RBP5.95□□□□□ -1.46
POLR2B-208ENST00000478188 COL3A1P02461 1466 aaPredicted RBP5.95□□□□□ -1.46
POLR2B-208ENST00000478188 MAP3K19Q56UN5 1328 aa5.95□□□□□ -1.46
POLR2B-208ENST00000478188 SNPHO15079 494 aa5.95□□□□□ -1.46
POLR2B-208ENST00000478188 KIF7Q2M1P5 1343 aa5.94□□□□□ -1.46
POLR2B-208ENST00000478188 EIF4G2P78344 907 aaKnown RBP eCLIP5.94□□□□□ -1.46
POLR2B-208ENST00000478188 CARD10Q9BWT7 1032 aa5.94□□□□□ -1.46
POLR2B-208ENST00000478188 CCDC7Q96M83 1385 aa5.94□□□□□ -1.46
POLR2B-208ENST00000478188 OVOS2A0A0G2JMS6 1433 aa5.94□□□□□ -1.46
POLR2B-208ENST00000478188 HAP1P54257 671 aaPredicted RBP5.94□□□□□ -1.46
POLR2B-208ENST00000478188 TCP11L2Q8N4U5 519 aa5.94□□□□□ -1.46
POLR2B-208ENST00000478188 TMC1Q8TDI8 760 aa5.94□□□□□ -1.46
POLR2B-208ENST00000478188 CICQ96RK0 1608 aaPredicted RBP5.94□□□□□ -1.46
POLR2B-208ENST00000478188 FBLN1P23142 703 aa5.93□□□□□ -1.46
POLR2B-208ENST00000478188 KRT27Q7Z3Y8 459 aa5.93□□□□□ -1.46
POLR2B-208ENST00000478188 IP6K1Q92551 441 aa5.93□□□□□ -1.46
POLR2B-208ENST00000478188 TAF1LQ8IZX4 1826 aa5.93□□□□□ -1.46
POLR2B-208ENST00000478188 NSD2O96028 1365 aa5.93□□□□□ -1.46
POLR2B-208ENST00000478188 HOXC9P31274 260 aa5.93□□□□□ -1.46
POLR2B-208ENST00000478188 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.93□□□□□ -1.461e-6■■□□□ 13.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms