RNA–Protein interactions for RNA: ENST00000478171.1

PLXNB1-214, Transcript of plexin B1, humanhuman

TSL 3

Gene PLXNB1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-214ENST00000478171 AKT1S1Q96B36 256 aa22.74■■□□□ 1.23
PLXNB1-214ENST00000478171 FYB1O15117 783 aa22.73■■□□□ 1.23
PLXNB1-214ENST00000478171 NBPF6Q5VWK0 638 aa22.73■■□□□ 1.23
PLXNB1-214ENST00000478171 NBPF4Q96M43 638 aa22.73■■□□□ 1.23
PLXNB1-214ENST00000478171 UTRNP46939 3433 aa22.73■■□□□ 1.23
PLXNB1-214ENST00000478171 KIF20BQ96Q89 1820 aa22.73■■□□□ 1.23
PLXNB1-214ENST00000478171 TMF1P82094 1093 aa22.72■■□□□ 1.23
PLXNB1-214ENST00000478171 ZCRB1Q8TBF4 217 aaKnown RBP22.71■■□□□ 1.23
PLXNB1-214ENST00000478171 ARXQ96QS3 562 aa22.71■■□□□ 1.23
PLXNB1-214ENST00000478171 LY75O60449 1722 aa22.71■■□□□ 1.23
PLXNB1-214ENST00000478171 PNPLA7Q6ZV29 1317 aa22.7■■□□□ 1.22
PLXNB1-214ENST00000478171 QSER1Q2KHR3 1735 aa22.7■■□□□ 1.22
PLXNB1-214ENST00000478171 SLC27A3Q5K4L6 730 aa22.69■■□□□ 1.22
PLXNB1-214ENST00000478171 SMG6Q86US8 1419 aaKnown RBP22.67■■□□□ 1.22
PLXNB1-214ENST00000478171 HSP90AB2PQ58FF8 381 aa22.67■■□□□ 1.22
PLXNB1-214ENST00000478171 NSD3Q9BZ95 1437 aa22.66■■□□□ 1.22
PLXNB1-214ENST00000478171 KLHL34Q8N239 644 aa22.66■■□□□ 1.22
PLXNB1-214ENST00000478171 MAP3K5Q99683 1374 aa22.65■■□□□ 1.22
PLXNB1-214ENST00000478171 SLC24A1O60721 1099 aa22.65■■□□□ 1.22
PLXNB1-214ENST00000478171 TRIM26Q12899 539 aaPredicted RBP22.65■■□□□ 1.22
PLXNB1-214ENST00000478171 TFCP2L1Q9NZI6 479 aa22.65■■□□□ 1.22
PLXNB1-214ENST00000478171 CARD14Q9BXL6 1004 aa22.64■■□□□ 1.21
PLXNB1-214ENST00000478171 CCNL1Q9UK58 526 aaPredicted RBP22.64■■□□□ 1.21
PLXNB1-214ENST00000478171 INSRP06213 1382 aa22.63■■□□□ 1.21
PLXNB1-214ENST00000478171 FLT4P35916 1363 aa22.63■■□□□ 1.21
PLXNB1-214ENST00000478171 COL24A1Q17RW2 1714 aa22.63■■□□□ 1.21
PLXNB1-214ENST00000478171 RAPGEF4Q8WZA2 1011 aa22.63■■□□□ 1.21
PLXNB1-214ENST00000478171 EMILIN1Q9Y6C2 1016 aa22.63■■□□□ 1.21
PLXNB1-214ENST00000478171 TOGARAM1Q9Y4F4 1720 aa22.62■■□□□ 1.21
PLXNB1-214ENST00000478171 ZNF784Q8NCA9 323 aaPredicted RBP22.61■■□□□ 1.21
PLXNB1-214ENST00000478171 TATP17735 454 aaPredicted RBP22.6■■□□□ 1.21
PLXNB1-214ENST00000478171 SLC16A10Q8TF71 515 aa22.59■■□□□ 1.21
PLXNB1-214ENST00000478171 CGNL1Q0VF96 1302 aa22.58■■□□□ 1.21
PLXNB1-214ENST00000478171 PCDH11XQ9BZA7 1347 aa22.58■■□□□ 1.21
PLXNB1-214ENST00000478171 PCDH11YQ9BZA8 1340 aa22.58■■□□□ 1.21
PLXNB1-214ENST00000478171 POLD1P28340 1107 aa22.58■■□□□ 1.21
PLXNB1-214ENST00000478171 NLGN2Q8NFZ4 835 aa22.58■■□□□ 1.21
PLXNB1-214ENST00000478171 C5P01031 1676 aa22.58■■□□□ 1.2
PLXNB1-214ENST00000478171 ANKRD26Q9UPS8 1709 aa22.57■■□□□ 1.2
PLXNB1-214ENST00000478171 CDCA8Q53HL2 280 aa22.57■■□□□ 1.2
PLXNB1-214ENST00000478171 MSL1Q68DK7 614 aa22.57■■□□□ 1.2
PLXNB1-214ENST00000478171 PKD1L3Q7Z443 1732 aa22.57■■□□□ 1.2
PLXNB1-214ENST00000478171 KIF24Q5T7B8 1368 aa22.56■■□□□ 1.2
PLXNB1-214ENST00000478171 PALLDQ8WX93 1383 aa22.56■■□□□ 1.2
PLXNB1-214ENST00000478171 CYP27B1O15528 508 aa22.56■■□□□ 1.2
PLXNB1-214ENST00000478171 MSH5O43196 834 aa22.56■■□□□ 1.2
PLXNB1-214ENST00000478171 COL23A1Q86Y22 540 aaPredicted RBP22.56■■□□□ 1.2
PLXNB1-214ENST00000478171 PELP1Q8IZL8 1130 aaKnown RBP22.55■■□□□ 1.2
PLXNB1-214ENST00000478171 NCAPD2Q15021 1401 aa22.55■■□□□ 1.2
PLXNB1-214ENST00000478171 GOLGB1Q14789 3259 aaKnown RBP22.54■■□□□ 1.2
PLXNB1-214ENST00000478171 PPM1GO15355 546 aaPredicted RBP22.54■■□□□ 1.2
PLXNB1-214ENST00000478171 GPR162Q16538 588 aa22.54■■□□□ 1.2
PLXNB1-214ENST00000478171 CHD4Q14839 1912 aa22.53■■□□□ 1.2
PLXNB1-214ENST00000478171 MPRIPQ6WCQ1 1025 aa22.53■■□□□ 1.2
PLXNB1-214ENST00000478171 AMIGO3Q86WK7 504 aa22.51■■□□□ 1.19
PLXNB1-214ENST00000478171 POLR3GLQ9BT43 218 aa22.51■■□□□ 1.19
PLXNB1-214ENST00000478171 TAF1LQ8IZX4 1826 aa22.51■■□□□ 1.19
PLXNB1-214ENST00000478171 ITGB4P16144 1822 aa22.5■■□□□ 1.19
PLXNB1-214ENST00000478171 SMIM5Q71RC9 77 aa22.5■■□□□ 1.19
PLXNB1-214ENST00000478171 C4BP0C0L5 1744 aa22.49■■□□□ 1.19
PLXNB1-214ENST00000478171 EYA1Q99502 592 aa22.48■■□□□ 1.19
PLXNB1-214ENST00000478171 YBX3P16989 372 aaKnown RBP eCLIP22.46■■□□□ 1.19
PLXNB1-214ENST00000478171 TNNT2P45379 298 aaPredicted RBP22.46■■□□□ 1.19
PLXNB1-214ENST00000478171 PIGBQ92521 554 aa22.46■■□□□ 1.19
PLXNB1-214ENST00000478171 PCGF6Q9BYE7 350 aa22.46■■□□□ 1.19
PLXNB1-214ENST00000478171 WASHC2AQ641Q2 1341 aa22.46■■□□□ 1.19
PLXNB1-214ENST00000478171 POLKQ9UBT6 870 aa22.45■■□□□ 1.18
PLXNB1-214ENST00000478171 PHF14O94880 888 aa22.44■■□□□ 1.18
PLXNB1-214ENST00000478171 MAP2P11137 1827 aaKnown RBP22.44■■□□□ 1.18
PLXNB1-214ENST00000478171 AK7Q96M32 723 aa22.42■■□□□ 1.18
PLXNB1-214ENST00000478171 SPG7Q9UQ90 795 aa22.42■■□□□ 1.18
PLXNB1-214ENST00000478171 UBR3Q6ZT12 1888 aa22.42■■□□□ 1.18
PLXNB1-214ENST00000478171 EIF4A2Q14240 407 aaKnown RBP22.41■■□□□ 1.18
PLXNB1-214ENST00000478171 NKX1-1Q15270 411 aaPredicted RBP22.41■■□□□ 1.18
PLXNB1-214ENST00000478171 LINC00116Q8NCU8 138 aa22.41■■□□□ 1.18
PLXNB1-214ENST00000478171 SMARCC1Q92922 1105 aaPredicted RBP22.41■■□□□ 1.18
PLXNB1-214ENST00000478171 PHKG2P15735 406 aa22.39■■□□□ 1.17
PLXNB1-214ENST00000478171 ASAP1Q9ULH1 1129 aa22.39■■□□□ 1.17
PLXNB1-214ENST00000478171 TIMELESSQ9UNS1 1208 aa22.39■■□□□ 1.17
PLXNB1-214ENST00000478171 LOC102724428A0A0B4J2F2 783 aa22.38■■□□□ 1.17
PLXNB1-214ENST00000478171 SIK1P57059 783 aa22.38■■□□□ 1.17
PLXNB1-214ENST00000478171 ITPK1Q13572 414 aa22.38■■□□□ 1.17
PLXNB1-214ENST00000478171 TMOD3Q9NYL9 352 aa22.38■■□□□ 1.17
PLXNB1-214ENST00000478171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.37■■□□□ 1.17
PLXNB1-214ENST00000478171 HSPA5P11021 654 aaKnown RBP22.37■■□□□ 1.17
PLXNB1-214ENST00000478171 FLAD1Q8NFF5 587 aa22.37■■□□□ 1.17
PLXNB1-214ENST00000478171 WWC3Q9ULE0 1092 aa22.37■■□□□ 1.17
PLXNB1-214ENST00000478171 SENP3-EIF4A1A0A087X0R7 540 aa22.36■■□□□ 1.17
PLXNB1-214ENST00000478171 C1QTNF8P60827 252 aa22.36■■□□□ 1.17
PLXNB1-214ENST00000478171 CLSPNQ9HAW4 1339 aa22.35■■□□□ 1.17
PLXNB1-214ENST00000478171 IFNL2Q8IZJ0 200 aa22.35■■□□□ 1.17
PLXNB1-214ENST00000478171 PANK3Q9H999 370 aa22.34■■□□□ 1.17
PLXNB1-214ENST00000478171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.34■■□□□ 1.178e-16■□□□□ 10.7
PLXNB1-214ENST00000478171 KDRP35968 1356 aa22.34■■□□□ 1.17
PLXNB1-214ENST00000478171 IGSF1Q8N6C5 1336 aa22.33■■□□□ 1.17
PLXNB1-214ENST00000478171 GNPATO15228 680 aa22.33■■□□□ 1.17
PLXNB1-214ENST00000478171 ATG3Q9NT62 314 aa22.33■■□□□ 1.17
PLXNB1-214ENST00000478171 CD2APQ9Y5K6 639 aa22.33■■□□□ 1.17
PLXNB1-214ENST00000478171 GIGYF1O75420 1035 aaPredicted RBP22.32■■□□□ 1.16
PLXNB1-214ENST00000478171 KDM6AO15550 1401 aaPredicted RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms