RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 SHANK3Q9BYB0 1731 aa18.96■□□□□ 0.63
HDAC7-222ENST00000477937 MEGF6O75095 1541 aa18.95■□□□□ 0.62
HDAC7-222ENST00000477937 TNNT2P45379 298 aaPredicted RBP18.95■□□□□ 0.62
HDAC7-222ENST00000477937 WASHC2AQ641Q2 1341 aa18.95■□□□□ 0.62
HDAC7-222ENST00000477937 TATP17735 454 aaPredicted RBP18.94■□□□□ 0.62
HDAC7-222ENST00000477937 PROM2Q8N271 834 aa18.94■□□□□ 0.62
HDAC7-222ENST00000477937 POLKQ9UBT6 870 aa18.94■□□□□ 0.62
HDAC7-222ENST00000477937 KNSTRNQ9Y448 316 aa18.94■□□□□ 0.62
HDAC7-222ENST00000477937 NSD2O96028 1365 aa18.93■□□□□ 0.62
HDAC7-222ENST00000477937 TXNRD1Q16881 649 aa18.93■□□□□ 0.62
HDAC7-222ENST00000477937 SRCAPQ6ZRS2 3230 aa18.92■□□□□ 0.62
HDAC7-222ENST00000477937 KIF7Q2M1P5 1343 aa18.92■□□□□ 0.62
HDAC7-222ENST00000477937 DOT1LQ8TEK3 1739 aa18.91■□□□□ 0.62
HDAC7-222ENST00000477937 MORC1Q86VD1 984 aa18.9■□□□□ 0.62
HDAC7-222ENST00000477937 SYTL4Q96C24 671 aaPredicted RBP18.89■□□□□ 0.61
HDAC7-222ENST00000477937 PRIM1P49642 420 aaKnown RBP18.88■□□□□ 0.61
HDAC7-222ENST00000477937 EYA1Q99502 592 aa18.87■□□□□ 0.61
HDAC7-222ENST00000477937 PCDH11XQ9BZA7 1347 aa18.87■□□□□ 0.61
HDAC7-222ENST00000477937 PCDH11YQ9BZA8 1340 aa18.87■□□□□ 0.61
HDAC7-222ENST00000477937 ANO8Q9HCE9 1232 aaPredicted RBP18.87■□□□□ 0.61
HDAC7-222ENST00000477937 STK32BQ9NY57 414 aa18.87■□□□□ 0.61
HDAC7-222ENST00000477937 NCAPD2Q15021 1401 aa18.86■□□□□ 0.61
HDAC7-222ENST00000477937 PKD1L3Q7Z443 1732 aa18.86■□□□□ 0.61
HDAC7-222ENST00000477937 EIF4A2Q14240 407 aaKnown RBP18.85■□□□□ 0.61
HDAC7-222ENST00000477937 SLC15A2Q16348 729 aa18.84■□□□□ 0.61
HDAC7-222ENST00000477937 SPG7Q9UQ90 795 aa18.84■□□□□ 0.61
HDAC7-222ENST00000477937 AMER1Q5JTC6 1135 aaPredicted RBP18.83■□□□□ 0.6
HDAC7-222ENST00000477937 SPON1Q9HCB6 807 aa18.83■□□□□ 0.6
HDAC7-222ENST00000477937 ITGB4P16144 1822 aa18.82■□□□□ 0.6
HDAC7-222ENST00000477937 CYP27B1O15528 508 aa18.82■□□□□ 0.6
HDAC7-222ENST00000477937 SLC27A3Q5K4L6 730 aa18.82■□□□□ 0.6
HDAC7-222ENST00000477937 CASZ1Q86V15 1759 aa18.82■□□□□ 0.6
HDAC7-222ENST00000477937 LY75O60449 1722 aa18.82■□□□□ 0.6
HDAC7-222ENST00000477937 PER1O15534 1290 aaPredicted RBP18.81■□□□□ 0.6
HDAC7-222ENST00000477937 LRRC4BQ9NT99 713 aa18.81■□□□□ 0.6
HDAC7-222ENST00000477937 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.81■□□□□ 0.6
HDAC7-222ENST00000477937 PAPPAQ13219 1627 aa18.79■□□□□ 0.6
HDAC7-222ENST00000477937 IGSF1Q8N6C5 1336 aa18.78■□□□□ 0.6
HDAC7-222ENST00000477937 NKX1-1Q15270 411 aaPredicted RBP18.78■□□□□ 0.6
HDAC7-222ENST00000477937 PDGFDQ9GZP0 370 aaPredicted RBP18.78■□□□□ 0.6
HDAC7-222ENST00000477937 TOGARAM1Q9Y4F4 1720 aa18.77■□□□□ 0.6
HDAC7-222ENST00000477937 MPRIPQ6WCQ1 1025 aa18.77■□□□□ 0.6
HDAC7-222ENST00000477937 PPP1R1BQ9UD71 204 aaPredicted RBP18.77■□□□□ 0.6
HDAC7-222ENST00000477937 CC2D1BQ5T0F9 858 aaKnown RBP18.76■□□□□ 0.59
HDAC7-222ENST00000477937 IFNL2Q8IZJ0 200 aa18.76■□□□□ 0.59
HDAC7-222ENST00000477937 PLEKHG2Q9H7P9 1386 aa18.76■□□□□ 0.59
HDAC7-222ENST00000477937 QSER1Q2KHR3 1735 aa18.75■□□□□ 0.59
HDAC7-222ENST00000477937 ZBTB7AO95365 584 aa18.75■□□□□ 0.59
HDAC7-222ENST00000477937 KCNQ4P56696 695 aa18.75■□□□□ 0.59
HDAC7-222ENST00000477937 CCNL1Q9UK58 526 aaPredicted RBP18.75■□□□□ 0.59
HDAC7-222ENST00000477937 PHKG2P15735 406 aa18.74■□□□□ 0.59
HDAC7-222ENST00000477937 ZNF827Q17R98 1081 aa18.74■□□□□ 0.59
HDAC7-222ENST00000477937 AKT1S1Q96B36 256 aa18.74■□□□□ 0.59
HDAC7-222ENST00000477937 HMGB2P26583 209 aaKnown RBP18.73■□□□□ 0.59
HDAC7-222ENST00000477937 MTHFSP49914 203 aa18.73■□□□□ 0.59
HDAC7-222ENST00000477937 PLEKHO1Q53GL0 409 aaPredicted RBP18.73■□□□□ 0.59
HDAC7-222ENST00000477937 ATF5Q9Y2D1 282 aaPredicted RBP18.73■□□□□ 0.59
HDAC7-222ENST00000477937 NPC1L1Q9UHC9 1359 aa18.72■□□□□ 0.59
HDAC7-222ENST00000477937 IL13P35225 146 aa18.72■□□□□ 0.59
HDAC7-222ENST00000477937 SMARCC1Q92922 1105 aaPredicted RBP18.72■□□□□ 0.59
HDAC7-222ENST00000477937 MTFR1LQ9H019 292 aa18.72■□□□□ 0.59
HDAC7-222ENST00000477937 TFCP2L1Q9NZI6 479 aa18.72■□□□□ 0.59
HDAC7-222ENST00000477937 TAF1LQ8IZX4 1826 aa18.72■□□□□ 0.59
HDAC7-222ENST00000477937 TUBGCP6Q96RT7 1819 aa18.72■□□□□ 0.59
HDAC7-222ENST00000477937 PALLDQ8WX93 1383 aa18.71■□□□□ 0.59
HDAC7-222ENST00000477937 AMOTQ4VCS5 1084 aa18.71■□□□□ 0.59
HDAC7-222ENST00000477937 SULT6B1Q6IMI4 303 aa18.71■□□□□ 0.59
HDAC7-222ENST00000477937 PIGBQ92521 554 aa18.71■□□□□ 0.59
HDAC7-222ENST00000477937 C5P01031 1676 aa18.7■□□□□ 0.58
HDAC7-222ENST00000477937 CNGB1Q14028 1251 aaPredicted RBP18.7■□□□□ 0.58
HDAC7-222ENST00000477937 TMOD3Q9NYL9 352 aa18.7■□□□□ 0.58
HDAC7-222ENST00000477937 HSP90AB1P08238 724 aaKnown RBP18.69■□□□□ 0.58
HDAC7-222ENST00000477937 PTGER2P43116 358 aa18.69■□□□□ 0.58
HDAC7-222ENST00000477937 AEBP1Q8IUX7 1158 aa18.69■□□□□ 0.58
HDAC7-222ENST00000477937 ZNF530Q6P9A1 599 aaPredicted RBP18.68■□□□□ 0.58
HDAC7-222ENST00000477937 SLC16A10Q8TF71 515 aa18.68■□□□□ 0.58
HDAC7-222ENST00000477937 KDRP35968 1356 aa18.68■□□□□ 0.58
HDAC7-222ENST00000477937 DCAF5Q96JK2 942 aa18.67■□□□□ 0.58
HDAC7-222ENST00000477937 PNPLA7Q6ZV29 1317 aa18.67■□□□□ 0.58
HDAC7-222ENST00000477937 ERVV-2B6SEH9 535 aa18.66■□□□□ 0.58
HDAC7-222ENST00000477937 DIAPH1O60610 1272 aaKnown RBP18.66■□□□□ 0.58
HDAC7-222ENST00000477937 C1orf141Q5JVX7 400 aa18.66■□□□□ 0.58
HDAC7-222ENST00000477937 SGIP1Q9BQI5 828 aa18.64■□□□□ 0.57
HDAC7-222ENST00000477937 ASAP1Q9ULH1 1129 aa18.64■□□□□ 0.57
HDAC7-222ENST00000477937 LOC102724428A0A0B4J2F2 783 aa18.63■□□□□ 0.57
HDAC7-222ENST00000477937 SIK1P57059 783 aa18.63■□□□□ 0.57
HDAC7-222ENST00000477937 C4BP0C0L5 1744 aa18.63■□□□□ 0.57
HDAC7-222ENST00000477937 MSH5O43196 834 aa18.62■□□□□ 0.57
HDAC7-222ENST00000477937 HMOX1P09601 288 aa18.62■□□□□ 0.57
HDAC7-222ENST00000477937 ATG3Q9NT62 314 aa18.62■□□□□ 0.57
HDAC7-222ENST00000477937 COL24A1Q17RW2 1714 aa18.62■□□□□ 0.57
HDAC7-222ENST00000477937 SCN11AQ9UI33 1791 aa18.62■□□□□ 0.57
HDAC7-222ENST00000477937 VIRMAQ69YN4 1812 aaKnown RBP18.62■□□□□ 0.57
HDAC7-222ENST00000477937 DCAF8L1A6NGE4 600 aa18.61■□□□□ 0.57
HDAC7-222ENST00000477937 CABP4P57796 275 aa18.61■□□□□ 0.57
HDAC7-222ENST00000477937 FLAD1Q8NFF5 587 aa18.61■□□□□ 0.57
HDAC7-222ENST00000477937 ARXQ96QS3 562 aa18.61■□□□□ 0.57
HDAC7-222ENST00000477937 KDM6AO15550 1401 aaPredicted RBP18.6■□□□□ 0.57
HDAC7-222ENST00000477937 POLD1P28340 1107 aa18.6■□□□□ 0.57
HDAC7-222ENST00000477937 ATP6V1AP38606 617 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms