RNA–Protein interactions for RNA: ENST00000477703.5

SMIM4-203, Transcript of small integral membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM4, Length 1,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-203ENST00000477703 ALS2Q96Q42 1657 aa24.7■■□□□ 1.55
SMIM4-203ENST00000477703 IPO8O15397 1037 aaKnown RBP24.7■■□□□ 1.55
SMIM4-203ENST00000477703 RGPD2P0DJD1 1756 aa24.68■■□□□ 1.54
SMIM4-203ENST00000477703 HTATSF1O43719 755 aaKnown RBP24.67■■□□□ 1.54
SMIM4-203ENST00000477703 NBPF6Q5VWK0 638 aa24.67■■□□□ 1.54
SMIM4-203ENST00000477703 NBPF4Q96M43 638 aa24.67■■□□□ 1.54
SMIM4-203ENST00000477703 CADPS2Q86UW7 1296 aa24.67■■□□□ 1.54
SMIM4-203ENST00000477703 ARHGAP45Q92619 1136 aa24.67■■□□□ 1.54
SMIM4-203ENST00000477703 LMOD2Q6P5Q4 547 aa24.66■■□□□ 1.54
SMIM4-203ENST00000477703 TMEM57Q8N5G2 664 aa24.66■■□□□ 1.54
SMIM4-203ENST00000477703 USHBP1Q8N6Y0 703 aa24.66■■□□□ 1.54
SMIM4-203ENST00000477703 RTF1Q92541 710 aaKnown RBP24.65■■□□□ 1.54
SMIM4-203ENST00000477703 KIAA0232Q92628 1395 aa24.65■■□□□ 1.54
SMIM4-203ENST00000477703 DDX17Q92841 729 aaKnown RBP24.65■■□□□ 1.54
SMIM4-203ENST00000477703 MSH6P52701 1360 aa24.64■■□□□ 1.54
SMIM4-203ENST00000477703 KRT24Q2M2I5 525 aa24.64■■□□□ 1.53
SMIM4-203ENST00000477703 DDX19BQ9UMR2 479 aa24.64■■□□□ 1.53
SMIM4-203ENST00000477703 LRRC37A3O60309 1634 aa24.63■■□□□ 1.53
SMIM4-203ENST00000477703 MED1Q15648 1581 aaPredicted RBP24.63■■□□□ 1.53
SMIM4-203ENST00000477703 ZBTB7CA1YPR0 619 aa24.62■■□□□ 1.53
SMIM4-203ENST00000477703 GNAT3A8MTJ3 354 aa24.62■■□□□ 1.53
SMIM4-203ENST00000477703 PDE4AP27815 886 aa24.62■■□□□ 1.53
SMIM4-203ENST00000477703 ITPRIPQ8IWB1 547 aa24.62■■□□□ 1.53
SMIM4-203ENST00000477703 MIS18AQ9NYP9 233 aa24.62■■□□□ 1.53
SMIM4-203ENST00000477703 BACH2Q9BYV9 841 aa24.61■■□□□ 1.53
SMIM4-203ENST00000477703 PLEKHG5O94827 1062 aa24.6■■□□□ 1.53
SMIM4-203ENST00000477703 IL17REQ8NFR9 667 aa24.6■■□□□ 1.53
SMIM4-203ENST00000477703 AXIN2Q9Y2T1 843 aa24.6■■□□□ 1.53
SMIM4-203ENST00000477703 RGPD5Q99666 1765 aa24.6■■□□□ 1.53
SMIM4-203ENST00000477703 NCAPD2Q15021 1401 aa24.6■■□□□ 1.53
SMIM4-203ENST00000477703 LRRC59Q96AG4 307 aaKnown RBP24.59■■□□□ 1.53
SMIM4-203ENST00000477703 ZBTB40Q9NUA8 1239 aa24.59■■□□□ 1.53
SMIM4-203ENST00000477703 MAP3K5Q99683 1374 aa24.59■■□□□ 1.53
SMIM4-203ENST00000477703 NPHP3Q7Z494 1330 aa24.58■■□□□ 1.53
SMIM4-203ENST00000477703 RWDD1Q9H446 243 aaPredicted RBP24.57■■□□□ 1.52
SMIM4-203ENST00000477703 TSPYL4Q9UJ04 414 aa24.57■■□□□ 1.52
SMIM4-203ENST00000477703 PXDNQ92626 1479 aa24.56■■□□□ 1.52
SMIM4-203ENST00000477703 ANKRD24Q8TF21 1146 aa24.56■■□□□ 1.52
SMIM4-203ENST00000477703 ABCC4O15439 1325 aa24.56■■□□□ 1.52
SMIM4-203ENST00000477703 CAMTA1Q9Y6Y1 1673 aa24.56■■□□□ 1.52
SMIM4-203ENST00000477703 HAP1P54257 671 aaPredicted RBP24.55■■□□□ 1.52
SMIM4-203ENST00000477703 ZNF335Q9H4Z2 1342 aaPredicted RBP24.55■■□□□ 1.52
SMIM4-203ENST00000477703 ZBTB7BO15156 539 aaPredicted RBP24.54■■□□□ 1.52
SMIM4-203ENST00000477703 RGS3P49796 1198 aa24.53■■□□□ 1.52
SMIM4-203ENST00000477703 ZC3H6P61129 1189 aaKnown RBP24.53■■□□□ 1.52
SMIM4-203ENST00000477703 TNS3Q68CZ2 1445 aa24.53■■□□□ 1.52
SMIM4-203ENST00000477703 COL18A1P39060 1754 aa24.52■■□□□ 1.52
SMIM4-203ENST00000477703 HDAC1Q13547 482 aaPredicted RBP24.52■■□□□ 1.52
SMIM4-203ENST00000477703 API5Q9BZZ5 524 aaKnown RBP24.52■■□□□ 1.52
SMIM4-203ENST00000477703 CEMIPQ8WUJ3 1361 aa24.52■■□□□ 1.52
SMIM4-203ENST00000477703 SPATA31A3Q5VYP0 1347 aa24.52■■□□□ 1.52
SMIM4-203ENST00000477703 BRINP3Q76B58 766 aa24.52■■□□□ 1.52
SMIM4-203ENST00000477703 BABAM1Q9NWV8 329 aa24.52■■□□□ 1.52
SMIM4-203ENST00000477703 CRYBG1Q9Y4K1 1723 aa24.51■■□□□ 1.51
SMIM4-203ENST00000477703 TAF7Q15545 349 aaPredicted RBP24.51■■□□□ 1.51
SMIM4-203ENST00000477703 LMO7Q8WWI1 1683 aa24.5■■□□□ 1.51
SMIM4-203ENST00000477703 MSH5O43196 834 aa24.49■■□□□ 1.51
SMIM4-203ENST00000477703 PDZRN3Q9UPQ7 1066 aa24.49■■□□□ 1.51
SMIM4-203ENST00000477703 RGS12O14924 1447 aa24.49■■□□□ 1.51
SMIM4-203ENST00000477703 ERBB3P21860 1342 aa24.48■■□□□ 1.51
SMIM4-203ENST00000477703 PLEKHO1Q53GL0 409 aaPredicted RBP24.48■■□□□ 1.51
SMIM4-203ENST00000477703 LGR6Q9HBX8 967 aa24.48■■□□□ 1.51
SMIM4-203ENST00000477703 CABLES1Q8TDN4 633 aa24.47■■□□□ 1.51
SMIM4-203ENST00000477703 AMOTQ4VCS5 1084 aa24.47■■□□□ 1.51
SMIM4-203ENST00000477703 AKAP4Q5JQC9 854 aa24.47■■□□□ 1.51
SMIM4-203ENST00000477703 C8orf34Q49A92 452 aa24.46■■□□□ 1.51
SMIM4-203ENST00000477703 SLAIN2Q9P270 581 aa24.46■■□□□ 1.51
SMIM4-203ENST00000477703 VIRMAQ69YN4 1812 aaKnown RBP24.45■■□□□ 1.51
SMIM4-203ENST00000477703 SLC4A2P04920 1241 aa24.45■■□□□ 1.5
SMIM4-203ENST00000477703 CHMP4BQ9H444 224 aaKnown RBP24.45■■□□□ 1.5
SMIM4-203ENST00000477703 FAM161AQ3B820 660 aa24.44■■□□□ 1.5
SMIM4-203ENST00000477703 INTS3Q68E01 1043 aaKnown RBP24.44■■□□□ 1.5
SMIM4-203ENST00000477703 PTPRCP08575 1304 aa24.44■■□□□ 1.5
SMIM4-203ENST00000477703 ZNF530Q6P9A1 599 aaPredicted RBP24.44■■□□□ 1.5
SMIM4-203ENST00000477703 SMC5Q8IY18 1101 aa24.43■■□□□ 1.5
SMIM4-203ENST00000477703 CACNA1FO60840 1977 aa24.42■■□□□ 1.5
SMIM4-203ENST00000477703 SOS1Q07889 1333 aaPredicted RBP24.41■■□□□ 1.5
SMIM4-203ENST00000477703 SOS2Q07890 1332 aaPredicted RBP24.41■■□□□ 1.5
SMIM4-203ENST00000477703 G2E3Q7L622 706 aa24.41■■□□□ 1.5
SMIM4-203ENST00000477703 FAM208AQ9UK61 1670 aaKnown RBP24.41■■□□□ 1.5
SMIM4-203ENST00000477703 ABCC6O95255 1503 aa24.41■■□□□ 1.5
SMIM4-203ENST00000477703 KDM3BQ7LBC6 1761 aa24.41■■□□□ 1.5
SMIM4-203ENST00000477703 CPDO75976 1380 aa24.4■■□□□ 1.5
SMIM4-203ENST00000477703 RNMTO43148 476 aaKnown RBP24.39■■□□□ 1.49
SMIM4-203ENST00000477703 MPRIPQ6WCQ1 1025 aa24.39■■□□□ 1.49
SMIM4-203ENST00000477703 CHRNA2Q15822 529 aa24.38■■□□□ 1.49
SMIM4-203ENST00000477703 C1orf115Q9H7X2 142 aa24.38■■□□□ 1.49
SMIM4-203ENST00000477703 CCDC30Q5VVM6 783 aa24.37■■□□□ 1.49
SMIM4-203ENST00000477703 SIRT2Q8IXJ6 389 aa24.37■■□□□ 1.49
SMIM4-203ENST00000477703 EIF4A1P60842 406 aaKnown RBP24.37■■□□□ 1.49
SMIM4-203ENST00000477703 ADAMTS7Q9UKP4 1686 aa24.36■■□□□ 1.49
SMIM4-203ENST00000477703 OVOS2A0A0G2JMS6 1433 aa24.36■■□□□ 1.49
SMIM4-203ENST00000477703 C1orf141Q5JVX7 400 aa24.36■■□□□ 1.49
SMIM4-203ENST00000477703 NLRP2Q9NX02 1062 aa24.36■■□□□ 1.49
SMIM4-203ENST00000477703 ANP32AP39687 249 aaKnown RBP24.35■■□□□ 1.49
SMIM4-203ENST00000477703 KCNQ3O43525 872 aa24.34■■□□□ 1.49
SMIM4-203ENST00000477703 STK31Q9BXU1 1019 aa24.34■■□□□ 1.49
SMIM4-203ENST00000477703 SIPA1L3O60292 1781 aaPredicted RBP24.34■■□□□ 1.49
SMIM4-203ENST00000477703 TEFQ10587 303 aa24.33■■□□□ 1.49
SMIM4-203ENST00000477703 NUCB1Q02818 461 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms