RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 SBNO2Q9Y2G9 1366 aa14.09□□□□□ -0.15
COL4A5-204ENST00000477429 ZNF692Q9BU19 519 aaPredicted RBP14.09□□□□□ -0.15
COL4A5-204ENST00000477429 PNPLA7Q6ZV29 1317 aa14.09□□□□□ -0.15
COL4A5-204ENST00000477429 USP31Q70CQ4 1352 aa14.09□□□□□ -0.15
COL4A5-204ENST00000477429 MON2Q7Z3U7 1717 aa14.08□□□□□ -0.16
COL4A5-204ENST00000477429 IL2RBP14784 551 aa14.08□□□□□ -0.16
COL4A5-204ENST00000477429 ANKRD24Q8TF21 1146 aa14.08□□□□□ -0.16
COL4A5-204ENST00000477429 TUBGCP6Q96RT7 1819 aa14.07□□□□□ -0.16
COL4A5-204ENST00000477429 FBLN1P23142 703 aa14.06□□□□□ -0.16
COL4A5-204ENST00000477429 KLHL34Q8N239 644 aa14.06□□□□□ -0.16
COL4A5-204ENST00000477429 USP54Q70EL1 1684 aa14.06□□□□□ -0.16
COL4A5-204ENST00000477429 COL24A1Q17RW2 1714 aa14.06□□□□□ -0.16
COL4A5-204ENST00000477429 NSD2O96028 1365 aa14.06□□□□□ -0.16
COL4A5-204ENST00000477429 LTN1O94822 1766 aa14.05□□□□□ -0.16
COL4A5-204ENST00000477429 DDX54Q8TDD1 881 aaKnown RBP14.04□□□□□ -0.16
COL4A5-204ENST00000477429 SLC12A5Q9H2X9 1139 aa14.04□□□□□ -0.16
COL4A5-204ENST00000477429 ROCK2O75116 1388 aaKnown RBP14.04□□□□□ -0.16
COL4A5-204ENST00000477429 PRIM1P49642 420 aaKnown RBP14.03□□□□□ -0.16
COL4A5-204ENST00000477429 HSPA1AP0DMV8 641 aaKnown RBP14.02□□□□□ -0.17
COL4A5-204ENST00000477429 HSPA1BP0DMV9 641 aaKnown RBP14.02□□□□□ -0.17
COL4A5-204ENST00000477429 CNKSR2Q8WXI2 1034 aa14.02□□□□□ -0.17
COL4A5-204ENST00000477429 LTV1Q96GA3 475 aaPredicted RBP14.02□□□□□ -0.17
COL4A5-204ENST00000477429 NEUROD1Q13562 356 aa14.01□□□□□ -0.17
COL4A5-204ENST00000477429 QSER1Q2KHR3 1735 aa14.01□□□□□ -0.17
COL4A5-204ENST00000477429 FAM208AQ9UK61 1670 aaKnown RBP14□□□□□ -0.17
COL4A5-204ENST00000477429 KAT6BQ8WYB5 2073 aa14□□□□□ -0.17
COL4A5-204ENST00000477429 A0A1W2PP64 1363 aa13.99□□□□□ -0.17
COL4A5-204ENST00000477429 DOT1LQ8TEK3 1739 aa13.99□□□□□ -0.17
COL4A5-204ENST00000477429 GRIN3BO60391 1043 aa13.99□□□□□ -0.17
COL4A5-204ENST00000477429 SLC27A3Q5K4L6 730 aa13.99□□□□□ -0.17
COL4A5-204ENST00000477429 MSL1Q68DK7 614 aa13.99□□□□□ -0.17
COL4A5-204ENST00000477429 COL23A1Q86Y22 540 aaPredicted RBP13.99□□□□□ -0.17
COL4A5-204ENST00000477429 TMC1Q8TDI8 760 aa13.99□□□□□ -0.17
COL4A5-204ENST00000477429 SLC16A10Q8TF71 515 aa13.99□□□□□ -0.17
COL4A5-204ENST00000477429 IP6K1Q92551 441 aa13.99□□□□□ -0.17
COL4A5-204ENST00000477429 TFCP2L1Q9NZI6 479 aa13.99□□□□□ -0.17
COL4A5-204ENST00000477429 MEGF6O75095 1541 aa13.99□□□□□ -0.17
COL4A5-204ENST00000477429 SMIM5Q71RC9 77 aa13.98□□□□□ -0.17
COL4A5-204ENST00000477429 AMIGO3Q86WK7 504 aa13.98□□□□□ -0.17
COL4A5-204ENST00000477429 SYTL4Q96C24 671 aaPredicted RBP13.98□□□□□ -0.17
COL4A5-204ENST00000477429 RGPD2P0DJD1 1756 aa13.98□□□□□ -0.17
COL4A5-204ENST00000477429 LY75O60449 1722 aa13.98□□□□□ -0.17
COL4A5-204ENST00000477429 ANKRD36BQ8N2N9 1353 aa13.97□□□□□ -0.17
COL4A5-204ENST00000477429 MAP3K19Q56UN5 1328 aa13.97□□□□□ -0.17
COL4A5-204ENST00000477429 EDC4Q6P2E9 1401 aaKnown RBP13.97□□□□□ -0.17
COL4A5-204ENST00000477429 POLD1P28340 1107 aa13.96□□□□□ -0.17
COL4A5-204ENST00000477429 TOMM70O94826 608 aa13.95□□□□□ -0.18
COL4A5-204ENST00000477429 USHBP1Q8N6Y0 703 aa13.95□□□□□ -0.18
COL4A5-204ENST00000477429 TNRC18O15417 2968 aaPredicted RBP13.95□□□□□ -0.18
COL4A5-204ENST00000477429 HOXC9P31274 260 aa13.94□□□□□ -0.18
COL4A5-204ENST00000477429 CCNL1Q9UK58 526 aaPredicted RBP13.94□□□□□ -0.18
COL4A5-204ENST00000477429 NBPF6Q5VWK0 638 aa13.93□□□□□ -0.18
COL4A5-204ENST00000477429 HDGFL2Q7Z4V5 671 aaPredicted RBP13.93□□□□□ -0.18
COL4A5-204ENST00000477429 ZCRB1Q8TBF4 217 aaKnown RBP13.93□□□□□ -0.18
COL4A5-204ENST00000477429 NBPF4Q96M43 638 aa13.93□□□□□ -0.18
COL4A5-204ENST00000477429 MSH5O43196 834 aa13.92□□□□□ -0.18
COL4A5-204ENST00000477429 CARD11Q9BXL7 1154 aa13.92□□□□□ -0.18
COL4A5-204ENST00000477429 RRS1Q15050 365 aaKnown RBP13.91□□□□□ -0.18
COL4A5-204ENST00000477429 TESK2Q96S53 571 aa13.91□□□□□ -0.18
COL4A5-204ENST00000477429 MLLT1Q03111 559 aaPredicted RBP13.9□□□□□ -0.18
COL4A5-204ENST00000477429 TOGARAM1Q9Y4F4 1720 aa13.9□□□□□ -0.18
COL4A5-204ENST00000477429 AMPHP49418 695 aa13.88□□□□□ -0.19
COL4A5-204ENST00000477429 TERF2IPQ9NYB0 399 aa13.88□□□□□ -0.19
COL4A5-204ENST00000477429 USP47Q96K76 1375 aa13.87□□□□□ -0.19
COL4A5-204ENST00000477429 C5P01031 1676 aa13.87□□□□□ -0.19
COL4A5-204ENST00000477429 PDE4DIPQ5VU43 2346 aa13.86□□□□□ -0.19
COL4A5-204ENST00000477429 CYP27B1O15528 508 aa13.86□□□□□ -0.19
COL4A5-204ENST00000477429 COG3Q96JB2 828 aa13.86□□□□□ -0.19
COL4A5-204ENST00000477429 PALLDQ8WX93 1383 aa13.85□□□□□ -0.19
COL4A5-204ENST00000477429 FYB1O15117 783 aa13.85□□□□□ -0.19
COL4A5-204ENST00000477429 HSP90AB2PQ58FF8 381 aa13.85□□□□□ -0.19
COL4A5-204ENST00000477429 GGNBP2Q9H3C7 697 aa13.85□□□□□ -0.19
COL4A5-204ENST00000477429 CD2APQ9Y5K6 639 aa13.85□□□□□ -0.19
COL4A5-204ENST00000477429 TAF1LQ8IZX4 1826 aa13.85□□□□□ -0.19
COL4A5-204ENST00000477429 ST20-MTHFSA0A0A6YYL1 179 aa13.84□□□□□ -0.19
COL4A5-204ENST00000477429 MPRIPQ6WCQ1 1025 aa13.84□□□□□ -0.19
COL4A5-204ENST00000477429 NMRK2Q9NPI5 230 aa13.84□□□□□ -0.19
COL4A5-204ENST00000477429 PHF14O94880 888 aa13.83□□□□□ -0.2
COL4A5-204ENST00000477429 PUS7Q96PZ0 661 aaKnown RBP13.83□□□□□ -0.2
COL4A5-204ENST00000477429 C4BP0C0L5 1744 aa13.83□□□□□ -0.2
COL4A5-204ENST00000477429 IGSF1Q8N6C5 1336 aa13.83□□□□□ -0.2
COL4A5-204ENST00000477429 RGS19P49795 217 aa13.82□□□□□ -0.2
COL4A5-204ENST00000477429 LINC00116Q8NCU8 138 aa13.82□□□□□ -0.2
COL4A5-204ENST00000477429 RBM46Q8TBY0 533 aaKnown RBP13.82□□□□□ -0.2
COL4A5-204ENST00000477429 PIGBQ92521 554 aa13.82□□□□□ -0.2
COL4A5-204ENST00000477429 ABHD8Q96I13 439 aa13.82□□□□□ -0.2
COL4A5-204ENST00000477429 RTL1A6NKG5 1358 aa13.82□□□□□ -0.2
COL4A5-204ENST00000477429 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.8□□□□□ -0.2
COL4A5-204ENST00000477429 TATP17735 454 aaPredicted RBP13.8□□□□□ -0.2
COL4A5-204ENST00000477429 ITPK1Q13572 414 aa13.8□□□□□ -0.2
COL4A5-204ENST00000477429 RAPGEF4Q8WZA2 1011 aa13.8□□□□□ -0.2
COL4A5-204ENST00000477429 MAP2P11137 1827 aaKnown RBP13.8□□□□□ -0.2
COL4A5-204ENST00000477429 UBR3Q6ZT12 1888 aa13.8□□□□□ -0.2
COL4A5-204ENST00000477429 ITGB4P16144 1822 aa13.79□□□□□ -0.2
COL4A5-204ENST00000477429 EMILIN1Q9Y6C2 1016 aa13.79□□□□□ -0.2
COL4A5-204ENST00000477429 PCDH11XQ9BZA7 1347 aa13.79□□□□□ -0.2
COL4A5-204ENST00000477429 PCDH11YQ9BZA8 1340 aa13.79□□□□□ -0.2
COL4A5-204ENST00000477429 INSRP06213 1382 aa13.79□□□□□ -0.2
COL4A5-204ENST00000477429 CARD14Q9BXL6 1004 aa13.78□□□□□ -0.2
COL4A5-204ENST00000477429 KIAA1551Q9HCM1 1747 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms