RNA–Protein interactions for RNA: ENST00000476905.6

SSX2IP-206, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2

Gene SSX2IP, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-206ENST00000476905 FAM208AQ9UK61 1670 aaKnown RBP12.33□□□□□ -0.44
SSX2IP-206ENST00000476905 NSD2O96028 1365 aa12.33□□□□□ -0.44
SSX2IP-206ENST00000476905 EXOC5O00471 708 aa12.32□□□□□ -0.44
SSX2IP-206ENST00000476905 EIF4A2Q14240 407 aaKnown RBP12.32□□□□□ -0.44
SSX2IP-206ENST00000476905 EYA1Q99502 592 aa12.32□□□□□ -0.44
SSX2IP-206ENST00000476905 CDCA7Q9BWT1 371 aaPredicted RBP12.32□□□□□ -0.44
SSX2IP-206ENST00000476905 MEGF6O75095 1541 aa12.32□□□□□ -0.44
SSX2IP-206ENST00000476905 SPDYE4A6NLX3 237 aa12.32□□□□□ -0.44
SSX2IP-206ENST00000476905 CNGB1Q14028 1251 aaPredicted RBP12.32□□□□□ -0.44
SSX2IP-206ENST00000476905 MAP2P11137 1827 aaKnown RBP12.31□□□□□ -0.44
SSX2IP-206ENST00000476905 EN1Q05925 392 aaPredicted RBP12.31□□□□□ -0.44
SSX2IP-206ENST00000476905 ANKRD26Q9UPS8 1709 aa12.31□□□□□ -0.44
SSX2IP-206ENST00000476905 SMG6Q86US8 1419 aaKnown RBP12.31□□□□□ -0.44
SSX2IP-206ENST00000476905 WNK3Q9BYP7 1800 aa12.31□□□□□ -0.44
SSX2IP-206ENST00000476905 KCNQ2O43526 872 aa12.31□□□□□ -0.44
SSX2IP-206ENST00000476905 TNS2Q63HR2 1409 aa12.31□□□□□ -0.44
SSX2IP-206ENST00000476905 PAXIP1Q6ZW49 1069 aaPredicted RBP12.3□□□□□ -0.44
SSX2IP-206ENST00000476905 NCAPD2Q15021 1401 aa12.3□□□□□ -0.44
SSX2IP-206ENST00000476905 CAMKK2Q96RR4 588 aa12.3□□□□□ -0.44
SSX2IP-206ENST00000476905 NPC1L1Q9UHC9 1359 aa12.29□□□□□ -0.44
SSX2IP-206ENST00000476905 OVOS2A0A0G2JMS6 1433 aa12.29□□□□□ -0.44
SSX2IP-206ENST00000476905 BCL9O00512 1426 aa12.29□□□□□ -0.44
SSX2IP-206ENST00000476905 MTHFSP49914 203 aa12.28□□□□□ -0.44
SSX2IP-206ENST00000476905 EZH2Q15910 746 aaKnown RBP12.28□□□□□ -0.44
SSX2IP-206ENST00000476905 PROM2Q8N271 834 aa12.28□□□□□ -0.44
SSX2IP-206ENST00000476905 DDX54Q8TDD1 881 aaKnown RBP12.28□□□□□ -0.44
SSX2IP-206ENST00000476905 APBA3O96018 575 aa12.27□□□□□ -0.44
SSX2IP-206ENST00000476905 ACSBG1Q96GR2 724 aa12.27□□□□□ -0.44
SSX2IP-206ENST00000476905 TNS1Q9HBL0 1735 aaKnown RBP12.27□□□□□ -0.45
SSX2IP-206ENST00000476905 IL13P35225 146 aa12.27□□□□□ -0.45
SSX2IP-206ENST00000476905 ZCRB1Q8TBF4 217 aaKnown RBP12.27□□□□□ -0.45
SSX2IP-206ENST00000476905 CFAP44Q96MT7 982 aa12.27□□□□□ -0.45
SSX2IP-206ENST00000476905 CYP27B1O15528 508 aa12.26□□□□□ -0.45
SSX2IP-206ENST00000476905 AEBP1Q8IUX7 1158 aa12.26□□□□□ -0.45
SSX2IP-206ENST00000476905 IGSF1Q8N6C5 1336 aa12.26□□□□□ -0.45
SSX2IP-206ENST00000476905 MKRN4PQ13434 485 aaPredicted RBP12.25□□□□□ -0.45
SSX2IP-206ENST00000476905 SF3B2Q13435 895 aaKnown RBP12.25□□□□□ -0.45
SSX2IP-206ENST00000476905 BCL11BQ9C0K0 894 aaPredicted RBP12.25□□□□□ -0.45
SSX2IP-206ENST00000476905 BAG6P46379 1132 aa12.25□□□□□ -0.45
SSX2IP-206ENST00000476905 SHANK3Q9BYB0 1731 aa12.24□□□□□ -0.45
SSX2IP-206ENST00000476905 DDX10Q13206 875 aaKnown RBP12.24□□□□□ -0.45
SSX2IP-206ENST00000476905 RAPGEF4Q8WZA2 1011 aa12.24□□□□□ -0.45
SSX2IP-206ENST00000476905 SBF2Q86WG5 1849 aa12.24□□□□□ -0.45
SSX2IP-206ENST00000476905 TATP17735 454 aaPredicted RBP12.23□□□□□ -0.45
SSX2IP-206ENST00000476905 TSHZ2Q9NRE2 1034 aa12.23□□□□□ -0.45
SSX2IP-206ENST00000476905 RGPD1P0DJD0 1748 aa12.22□□□□□ -0.45
SSX2IP-206ENST00000476905 COL3A1P02461 1466 aaPredicted RBP12.22□□□□□ -0.45
SSX2IP-206ENST00000476905 PLSCR1O15162 318 aa12.22□□□□□ -0.45
SSX2IP-206ENST00000476905 PPP2R1AP30153 589 aa12.22□□□□□ -0.45
SSX2IP-206ENST00000476905 PRIM1P49642 420 aaKnown RBP12.22□□□□□ -0.45
SSX2IP-206ENST00000476905 U3KPZ7 1027 aaPredicted RBP12.22□□□□□ -0.45
SSX2IP-206ENST00000476905 ZEB1P37275 1124 aaPredicted RBP12.21□□□□□ -0.46
SSX2IP-206ENST00000476905 SULT6B1Q6IMI4 303 aa12.21□□□□□ -0.46
SSX2IP-206ENST00000476905 KDRP35968 1356 aa12.2□□□□□ -0.46
SSX2IP-206ENST00000476905 DAXXQ9UER7 740 aaPredicted RBP12.2□□□□□ -0.46
SSX2IP-206ENST00000476905 PSDA5PKW4 1024 aaPredicted RBP12.19□□□□□ -0.46
SSX2IP-206ENST00000476905 NKX1-1Q15270 411 aaPredicted RBP12.19□□□□□ -0.46
SSX2IP-206ENST00000476905 ANO8Q9HCE9 1232 aaPredicted RBP12.19□□□□□ -0.46
SSX2IP-206ENST00000476905 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.19□□□□□ -0.46
SSX2IP-206ENST00000476905 HMOX1P09601 288 aa12.18□□□□□ -0.46
SSX2IP-206ENST00000476905 BBXQ8WY36 941 aaPredicted RBP12.18□□□□□ -0.46
SSX2IP-206ENST00000476905 LRRC4BQ9NT99 713 aa12.18□□□□□ -0.46
SSX2IP-206ENST00000476905 ZNF219Q9P2Y4 722 aaPredicted RBP12.18□□□□□ -0.46
SSX2IP-206ENST00000476905 PARD3Q8TEW0 1356 aa12.18□□□□□ -0.46
SSX2IP-206ENST00000476905 DIAPH1O60610 1272 aaKnown RBP12.18□□□□□ -0.46
SSX2IP-206ENST00000476905 PHKG2P15735 406 aa12.18□□□□□ -0.46
SSX2IP-206ENST00000476905 TXNRD1Q16881 649 aa12.18□□□□□ -0.46
SSX2IP-206ENST00000476905 PCDH11XQ9BZA7 1347 aa12.18□□□□□ -0.46
SSX2IP-206ENST00000476905 PCDH11YQ9BZA8 1340 aa12.18□□□□□ -0.46
SSX2IP-206ENST00000476905 KCNQ4P56696 695 aa12.17□□□□□ -0.46
SSX2IP-206ENST00000476905 NHSQ6T4R5 1651 aa12.17□□□□□ -0.46
SSX2IP-206ENST00000476905 PKD1L3Q7Z443 1732 aa12.17□□□□□ -0.46
SSX2IP-206ENST00000476905 R3HDM1Q15032 1099 aaKnown RBP12.17□□□□□ -0.46
SSX2IP-206ENST00000476905 SYTL4Q96C24 671 aaPredicted RBP12.17□□□□□ -0.46
SSX2IP-206ENST00000476905 SPG7Q9UQ90 795 aa12.16□□□□□ -0.46
SSX2IP-206ENST00000476905 KAT6BQ8WYB5 2073 aa12.16□□□□□ -0.46
SSX2IP-206ENST00000476905 PDGFDQ9GZP0 370 aaPredicted RBP12.16□□□□□ -0.46
SSX2IP-206ENST00000476905 PIGBQ92521 554 aa12.15□□□□□ -0.46
SSX2IP-206ENST00000476905 RREB1Q92766 1687 aa12.15□□□□□ -0.46
SSX2IP-206ENST00000476905 TOGARAM1Q9Y4F4 1720 aa12.15□□□□□ -0.47
SSX2IP-206ENST00000476905 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
SSX2IP-206ENST00000476905 IFNL2Q8IZJ0 200 aa12.14□□□□□ -0.47
SSX2IP-206ENST00000476905 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.14□□□□□ -0.47
SSX2IP-206ENST00000476905 BTAF1O14981 1849 aa12.14□□□□□ -0.47
SSX2IP-206ENST00000476905 MPRIPQ6WCQ1 1025 aa12.14□□□□□ -0.47
SSX2IP-206ENST00000476905 NUP188Q5SRE5 1749 aa12.14□□□□□ -0.47
SSX2IP-206ENST00000476905 DOT1LQ8TEK3 1739 aa12.14□□□□□ -0.47
SSX2IP-206ENST00000476905 KDM6AO15550 1401 aaPredicted RBP12.14□□□□□ -0.47
SSX2IP-206ENST00000476905 MTHFSDQ2M296 383 aaKnown RBP12.13□□□□□ -0.47
SSX2IP-206ENST00000476905 PLEKHO1Q53GL0 409 aaPredicted RBP12.13□□□□□ -0.47
SSX2IP-206ENST00000476905 ZNF530Q6P9A1 599 aaPredicted RBP12.13□□□□□ -0.47
SSX2IP-206ENST00000476905 PHACTR3Q96KR7 559 aa12.13□□□□□ -0.47
SSX2IP-206ENST00000476905 U2SURPO15042 1029 aaKnown RBP12.13□□□□□ -0.47
SSX2IP-206ENST00000476905 PLEKHG2Q9H7P9 1386 aa12.12□□□□□ -0.47
SSX2IP-206ENST00000476905 ZNF827Q17R98 1081 aa12.12□□□□□ -0.47
SSX2IP-206ENST00000476905 AMOTQ4VCS5 1084 aa12.12□□□□□ -0.47
SSX2IP-206ENST00000476905 RSPH6AQ9H0K4 717 aa12.12□□□□□ -0.47
SSX2IP-206ENST00000476905 LGR6Q9HBX8 967 aa12.12□□□□□ -0.47
SSX2IP-206ENST00000476905 ASAP1Q9ULH1 1129 aa12.12□□□□□ -0.47
SSX2IP-206ENST00000476905 GTF3C3Q9Y5Q9 886 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms