RNA–Protein interactions for RNA: ENST00000476794.1

FNDC3B-208, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-208ENST00000476794 USP17L12C9JPN9 530 aa10.43□□□□□ -0.74
FNDC3B-208ENST00000476794 USP17L11C9JVI0 530 aa10.43□□□□□ -0.74
FNDC3B-208ENST00000476794 USP17L21D6R901 530 aa10.43□□□□□ -0.74
FNDC3B-208ENST00000476794 USP17L18D6R9N7 530 aa10.43□□□□□ -0.74
FNDC3B-208ENST00000476794 USP17L22D6RA61 530 aa10.43□□□□□ -0.74
FNDC3B-208ENST00000476794 USP17L17D6RBQ6 530 aa10.43□□□□□ -0.74
FNDC3B-208ENST00000476794 USP17L19D6RCP7 530 aa10.43□□□□□ -0.74
FNDC3B-208ENST00000476794 USP17L20D6RJB6 530 aa10.43□□□□□ -0.74
FNDC3B-208ENST00000476794 ATP5J2-PTCD1G3V325 749 aa10.43□□□□□ -0.74
FNDC3B-208ENST00000476794 RASA1P20936 1047 aa10.43□□□□□ -0.74
FNDC3B-208ENST00000476794 USP17L24Q0WX57 530 aa10.43□□□□□ -0.74
FNDC3B-208ENST00000476794 NBPF20Q3BBV1 942 aa10.43□□□□□ -0.74
FNDC3B-208ENST00000476794 OXLD1Q5BKU9 147 aa10.43□□□□□ -0.74
FNDC3B-208ENST00000476794 RNF20Q5VTR2 975 aa10.43□□□□□ -0.74
FNDC3B-208ENST00000476794 LARP1Q6PKG0 1096 aaKnown RBP10.43□□□□□ -0.74
FNDC3B-208ENST00000476794 TRMT44Q8IYL2 757 aaKnown RBP10.43□□□□□ -0.74
FNDC3B-208ENST00000476794 SENP2Q9HC62 589 aa10.43□□□□□ -0.74
FNDC3B-208ENST00000476794 FAM196BA6NMK8 535 aa10.42□□□□□ -0.74
FNDC3B-208ENST00000476794 STK32AQ8WU08 396 aa10.42□□□□□ -0.74
FNDC3B-208ENST00000476794 VARSP26640 1264 aaKnown RBP10.41□□□□□ -0.74
FNDC3B-208ENST00000476794 PTK7Q13308 1070 aa10.41□□□□□ -0.74
FNDC3B-208ENST00000476794 TMEM164Q5U3C3 297 aa10.41□□□□□ -0.74
FNDC3B-208ENST00000476794 CDCA7Q9BWT1 371 aaPredicted RBP10.41□□□□□ -0.74
FNDC3B-208ENST00000476794 CDV3Q9UKY7 258 aaKnown RBP10.41□□□□□ -0.74
FNDC3B-208ENST00000476794 NOD1Q9Y239 953 aa10.41□□□□□ -0.74
FNDC3B-208ENST00000476794 ESPNB1AK53 854 aa10.4□□□□□ -0.74
FNDC3B-208ENST00000476794 RAB15P59190 212 aa10.4□□□□□ -0.74
FNDC3B-208ENST00000476794 OGFOD1Q8N543 542 aa10.4□□□□□ -0.74
FNDC3B-208ENST00000476794 BRD1O95696 1058 aa10.39□□□□□ -0.75
FNDC3B-208ENST00000476794 ALDH1A1P00352 501 aa10.39□□□□□ -0.75
FNDC3B-208ENST00000476794 TRIM50Q86XT4 487 aa10.39□□□□□ -0.75
FNDC3B-208ENST00000476794 KIFC2Q96AC6 838 aa10.39□□□□□ -0.75
FNDC3B-208ENST00000476794 KCTD15Q96SI1 283 aaPredicted RBP10.39□□□□□ -0.75
FNDC3B-208ENST00000476794 PCDHB11Q9Y5F2 797 aa10.39□□□□□ -0.75
FNDC3B-208ENST00000476794 TERTO14746 1132 aaKnown RBP10.38□□□□□ -0.75
FNDC3B-208ENST00000476794 CLDN10P78369 228 aa10.38□□□□□ -0.75
FNDC3B-208ENST00000476794 SEPT12Q8IYM1 358 aa10.38□□□□□ -0.75
FNDC3B-208ENST00000476794 MPNDQ8N594 471 aa10.38□□□□□ -0.75
FNDC3B-208ENST00000476794 EHBP1Q8NDI1 1231 aa10.38□□□□□ -0.75
FNDC3B-208ENST00000476794 ZNF594Q96JF6 807 aaPredicted RBP10.38□□□□□ -0.75
FNDC3B-208ENST00000476794 ATP1A2P50993 1020 aa10.37□□□□□ -0.75
FNDC3B-208ENST00000476794 VASH1Q7L8A9 365 aaPredicted RBP10.37□□□□□ -0.75
FNDC3B-208ENST00000476794 ANKMY2Q8IV38 441 aa10.37□□□□□ -0.75
FNDC3B-208ENST00000476794 FAM200AQ8TCP9 573 aa10.37□□□□□ -0.75
FNDC3B-208ENST00000476794 DNAAF2Q9NVR5 837 aaKnown RBP10.37□□□□□ -0.75
FNDC3B-208ENST00000476794 ARID5BQ14865 1188 aa10.36□□□□□ -0.75
FNDC3B-208ENST00000476794 ZBTB7BO15156 539 aaPredicted RBP10.35□□□□□ -0.75
FNDC3B-208ENST00000476794 GTF2IP78347 998 aa10.35□□□□□ -0.75
FNDC3B-208ENST00000476794 KCNA1Q09470 495 aa10.35□□□□□ -0.75
FNDC3B-208ENST00000476794 DPYDQ12882 1025 aa10.35□□□□□ -0.75
FNDC3B-208ENST00000476794 INTS6LQ5JSJ4 861 aaKnown RBP10.35□□□□□ -0.75
FNDC3B-208ENST00000476794 KIAA1024Q9UPX6 916 aa10.35□□□□□ -0.75
FNDC3B-208ENST00000476794 MAP4K5Q9Y4K4 846 aa10.35□□□□□ -0.75
FNDC3B-208ENST00000476794 USP4Q13107 963 aa10.34□□□□□ -0.75
FNDC3B-208ENST00000476794 TRIM46Q7Z4K8 759 aa10.34□□□□□ -0.75
FNDC3B-208ENST00000476794 CCDC125Q86Z20 511 aa10.34□□□□□ -0.75
FNDC3B-208ENST00000476794 LARGE2Q8N3Y3 721 aa10.34□□□□□ -0.75
FNDC3B-208ENST00000476794 GZF1Q9H116 711 aaPredicted RBP10.34□□□□□ -0.75
FNDC3B-208ENST00000476794 PATL2C9JE40 543 aaKnown RBP10.33□□□□□ -0.76
FNDC3B-208ENST00000476794 SIRT1Q96EB6 747 aa10.33□□□□□ -0.76
FNDC3B-208ENST00000476794 ERVH48-1M5A8F1 160 aa10.32□□□□□ -0.76
FNDC3B-208ENST00000476794 PSME1Q06323 249 aa10.32□□□□□ -0.76
FNDC3B-208ENST00000476794 PCDHGA11Q9Y5H2 935 aa10.32□□□□□ -0.76
FNDC3B-208ENST00000476794 TLL2Q9Y6L7 1015 aa10.32□□□□□ -0.76
FNDC3B-208ENST00000476794 FAM69CQ0P6D2 419 aa10.31□□□□□ -0.76
FNDC3B-208ENST00000476794 CCDC102BQ68D86 513 aa10.31□□□□□ -0.76
FNDC3B-208ENST00000476794 CDK15Q96Q40 435 aa10.31□□□□□ -0.76
FNDC3B-208ENST00000476794 STK17AQ9UEE5 414 aa10.31□□□□□ -0.76
FNDC3B-208ENST00000476794 DKK1O94907 266 aa10.3□□□□□ -0.76
FNDC3B-208ENST00000476794 FSHRP23945 695 aa10.3□□□□□ -0.76
FNDC3B-208ENST00000476794 B4GALNT3Q6L9W6 998 aa10.3□□□□□ -0.76
FNDC3B-208ENST00000476794 SIX5Q8N196 739 aa10.3□□□□□ -0.76
FNDC3B-208ENST00000476794 TPCN2Q8NHX9 752 aa10.3□□□□□ -0.76
FNDC3B-208ENST00000476794 SLAIN2Q9P270 581 aa10.3□□□□□ -0.76
FNDC3B-208ENST00000476794 CCDC9Q9Y3X0 531 aaKnown RBP10.3□□□□□ -0.76
FNDC3B-208ENST00000476794 RBM19Q9Y4C8 960 aaKnown RBP10.3□□□□□ -0.76
FNDC3B-208ENST00000476794 CAPN5O15484 640 aaPredicted RBP10.29□□□□□ -0.76
FNDC3B-208ENST00000476794 MYCP01106 439 aaPredicted RBP10.29□□□□□ -0.76
FNDC3B-208ENST00000476794 SCTRP47872 440 aa10.29□□□□□ -0.76
FNDC3B-208ENST00000476794 INSM1Q01101 510 aaPredicted RBP10.29□□□□□ -0.76
FNDC3B-208ENST00000476794 NPAS3Q8IXF0 933 aa10.29□□□□□ -0.76
FNDC3B-208ENST00000476794 WASF2Q9Y6W5 498 aa10.29□□□□□ -0.76
FNDC3B-208ENST00000476794 SFI1A8K8P3 1242 aa10.28□□□□□ -0.76
FNDC3B-208ENST00000476794 GRM5P41594 1212 aa10.28□□□□□ -0.76
FNDC3B-208ENST00000476794 SEC13P55735 322 aa10.28□□□□□ -0.76
FNDC3B-208ENST00000476794 CLP1Q92989 425 aaKnown RBP10.28□□□□□ -0.76
FNDC3B-208ENST00000476794 KLF16Q9BXK1 252 aaPredicted RBP10.28□□□□□ -0.76
FNDC3B-208ENST00000476794 TMPRSS4Q9NRS4 437 aa10.28□□□□□ -0.76
FNDC3B-208ENST00000476794 IVNS1ABPQ9Y6Y0 642 aa10.28□□□□□ -0.76
FNDC3B-208ENST00000476794 SWI5Q1ZZU3 235 aa10.27□□□□□ -0.77
FNDC3B-208ENST00000476794 ESF1Q9H501 851 aaKnown RBP10.27□□□□□ -0.77
FNDC3B-208ENST00000476794 NXF1Q9UBU9 619 aaKnown RBP10.27□□□□□ -0.77
FNDC3B-208ENST00000476794 BMP1P13497 986 aa10.26□□□□□ -0.77
FNDC3B-208ENST00000476794 PHLDB3Q6NSJ2 640 aa10.26□□□□□ -0.77
FNDC3B-208ENST00000476794 CYLDQ9NQC7 956 aa10.26□□□□□ -0.77
FNDC3B-208ENST00000476794 SSFA2P28290 1259 aa10.25□□□□□ -0.77
FNDC3B-208ENST00000476794 ERVK-9P63128 1117 aa10.25□□□□□ -0.77
FNDC3B-208ENST00000476794 DHX9Q08211 1270 aaKnown RBP10.25□□□□□ -0.77
FNDC3B-208ENST00000476794 TMCO4Q5TGY1 634 aa10.25□□□□□ -0.77
FNDC3B-208ENST00000476794 CC2D2BQ6DHV5 1058 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms