RNA–Protein interactions for RNA: ENST00000476068.1

C1GALT1-207, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best)

Gene C1GALT1, Length 1,186 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-207ENST00000476068 PRIM1P49642 420 aaKnown RBP18.39■□□□□ 0.53
C1GALT1-207ENST00000476068 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.39■□□□□ 0.534e-7■■■□□ 16.1
C1GALT1-207ENST00000476068 C5P01031 1676 aa18.38■□□□□ 0.53
C1GALT1-207ENST00000476068 CCNL1Q9UK58 526 aaPredicted RBP18.38■□□□□ 0.53
C1GALT1-207ENST00000476068 NME9Q86XW9 330 aa18.37■□□□□ 0.53
C1GALT1-207ENST00000476068 CD2APQ9Y5K6 639 aa18.36■□□□□ 0.53
C1GALT1-207ENST00000476068 RGPD2P0DJD1 1756 aa18.35■□□□□ 0.53
C1GALT1-207ENST00000476068 KIF3CO14782 793 aa18.35■□□□□ 0.53
C1GALT1-207ENST00000476068 TAF1LQ8IZX4 1826 aa18.35■□□□□ 0.53
C1GALT1-207ENST00000476068 WWC3Q9ULE0 1092 aa18.34■□□□□ 0.53
C1GALT1-207ENST00000476068 CD163L1Q9NR16 1453 aa18.33■□□□□ 0.53
C1GALT1-207ENST00000476068 SBNO2Q9Y2G9 1366 aa18.33■□□□□ 0.53
C1GALT1-207ENST00000476068 LTV1Q96GA3 475 aaPredicted RBP18.32■□□□□ 0.52
C1GALT1-207ENST00000476068 USP47Q96K76 1375 aa18.3■□□□□ 0.52
C1GALT1-207ENST00000476068 IGSF1Q8N6C5 1336 aa18.3■□□□□ 0.52
C1GALT1-207ENST00000476068 TOGARAM1Q9Y4F4 1720 aa18.3■□□□□ 0.52
C1GALT1-207ENST00000476068 APLP1P51693 650 aa18.3■□□□□ 0.52
C1GALT1-207ENST00000476068 MEGF6O75095 1541 aa18.29■□□□□ 0.52
C1GALT1-207ENST00000476068 DNAJC5GQ8N7S2 189 aa18.29■□□□□ 0.52
C1GALT1-207ENST00000476068 CICQ96RK0 1608 aaPredicted RBP18.28■□□□□ 0.52
C1GALT1-207ENST00000476068 IP6K1Q92551 441 aa18.28■□□□□ 0.52
C1GALT1-207ENST00000476068 WDR90Q96KV7 1748 aa18.28■□□□□ 0.52
C1GALT1-207ENST00000476068 C4BP0C0L5 1744 aa18.27■□□□□ 0.52
C1GALT1-207ENST00000476068 ZCRB1Q8TBF4 217 aaKnown RBP18.27■□□□□ 0.52
C1GALT1-207ENST00000476068 UBR3Q6ZT12 1888 aa18.26■□□□□ 0.51
C1GALT1-207ENST00000476068 EDC4Q6P2E9 1401 aaKnown RBP18.25■□□□□ 0.51
C1GALT1-207ENST00000476068 AMIGO3Q86WK7 504 aa18.25■□□□□ 0.51
C1GALT1-207ENST00000476068 ROCK2O75116 1388 aaKnown RBP18.25■□□□□ 0.51
C1GALT1-207ENST00000476068 FLAD1Q8NFF5 587 aa18.24■□□□□ 0.51
C1GALT1-207ENST00000476068 L3MBTL2Q969R5 705 aa18.23■□□□□ 0.51
C1GALT1-207ENST00000476068 PALLDQ8WX93 1383 aa18.22■□□□□ 0.51
C1GALT1-207ENST00000476068 CAPN15O75808 1086 aa18.22■□□□□ 0.51
C1GALT1-207ENST00000476068 COL13A1Q5TAT6 717 aaPredicted RBP18.22■□□□□ 0.51
C1GALT1-207ENST00000476068 SMIM5Q71RC9 77 aa18.22■□□□□ 0.51
C1GALT1-207ENST00000476068 TMC1Q8TDI8 760 aa18.22■□□□□ 0.51
C1GALT1-207ENST00000476068 KIAA1551Q9HCM1 1747 aa18.21■□□□□ 0.51
C1GALT1-207ENST00000476068 A0A1W2PP64 1363 aa18.21■□□□□ 0.51
C1GALT1-207ENST00000476068 TOMM70O94826 608 aa18.21■□□□□ 0.51
C1GALT1-207ENST00000476068 HDGFL2Q7Z4V5 671 aaPredicted RBP18.21■□□□□ 0.51
C1GALT1-207ENST00000476068 ITGB4P16144 1822 aa18.21■□□□□ 0.51
C1GALT1-207ENST00000476068 PHF14O94880 888 aa18.2■□□□□ 0.5
C1GALT1-207ENST00000476068 HOXC9P31274 260 aa18.2■□□□□ 0.5
C1GALT1-207ENST00000476068 SLC12A5Q9H2X9 1139 aa18.2■□□□□ 0.5
C1GALT1-207ENST00000476068 MAP3K19Q56UN5 1328 aa18.2■□□□□ 0.5
C1GALT1-207ENST00000476068 N4BP2Q86UW6 1770 aaPredicted RBP18.19■□□□□ 0.5
C1GALT1-207ENST00000476068 AK7Q96M32 723 aa18.19■□□□□ 0.5
C1GALT1-207ENST00000476068 KIF13BQ9NQT8 1826 aa18.19■□□□□ 0.5
C1GALT1-207ENST00000476068 FBLN1P23142 703 aa18.18■□□□□ 0.5
C1GALT1-207ENST00000476068 HTRA3P83110 453 aa18.18■□□□□ 0.5
C1GALT1-207ENST00000476068 NMRK2Q9NPI5 230 aa18.18■□□□□ 0.5
C1GALT1-207ENST00000476068 USHBP1Q8N6Y0 703 aa18.17■□□□□ 0.5
C1GALT1-207ENST00000476068 PXDNLA1KZ92 1463 aa18.16■□□□□ 0.5
C1GALT1-207ENST00000476068 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.16■□□□□ 0.5
C1GALT1-207ENST00000476068 AMPHP49418 695 aa18.16■□□□□ 0.5
C1GALT1-207ENST00000476068 MAP2P11137 1827 aaKnown RBP18.16■□□□□ 0.5
C1GALT1-207ENST00000476068 NBPF6Q5VWK0 638 aa18.15■□□□□ 0.5
C1GALT1-207ENST00000476068 MPRIPQ6WCQ1 1025 aa18.15■□□□□ 0.5
C1GALT1-207ENST00000476068 KLRG1Q96E93 195 aa18.15■□□□□ 0.5
C1GALT1-207ENST00000476068 NBPF4Q96M43 638 aa18.15■□□□□ 0.5
C1GALT1-207ENST00000476068 NSD3Q9BZ95 1437 aa18.15■□□□□ 0.5
C1GALT1-207ENST00000476068 HMGB2P26583 209 aaKnown RBP18.14■□□□□ 0.49
C1GALT1-207ENST00000476068 JMYQ8N9B5 988 aa18.14■□□□□ 0.49
C1GALT1-207ENST00000476068 TERF2IPQ9NYB0 399 aa18.14■□□□□ 0.49
C1GALT1-207ENST00000476068 CGNL1Q0VF96 1302 aa18.14■□□□□ 0.49
C1GALT1-207ENST00000476068 BRCA1P38398 1863 aaKnown RBP18.12■□□□□ 0.49
C1GALT1-207ENST00000476068 TNS4Q8IZW8 715 aa18.12■□□□□ 0.49
C1GALT1-207ENST00000476068 RBM46Q8TBY0 533 aaKnown RBP18.12■□□□□ 0.49
C1GALT1-207ENST00000476068 RAPGEF4Q8WZA2 1011 aa18.12■□□□□ 0.49
C1GALT1-207ENST00000476068 COG3Q96JB2 828 aa18.12■□□□□ 0.49
C1GALT1-207ENST00000476068 PCDH11XQ9BZA7 1347 aa18.12■□□□□ 0.49
C1GALT1-207ENST00000476068 PCDH11YQ9BZA8 1340 aa18.12■□□□□ 0.49
C1GALT1-207ENST00000476068 SSFA2P28290 1259 aa18.11■□□□□ 0.49
C1GALT1-207ENST00000476068 PRELPP51888 382 aa18.11■□□□□ 0.49
C1GALT1-207ENST00000476068 BCS1LQ9Y276 419 aa18.11■□□□□ 0.49
C1GALT1-207ENST00000476068 RTL1A6NKG5 1358 aa18.11■□□□□ 0.49
C1GALT1-207ENST00000476068 PKD1L3Q7Z443 1732 aa18.11■□□□□ 0.49
C1GALT1-207ENST00000476068 PCNTO95613 3336 aa18.1■□□□□ 0.49
C1GALT1-207ENST00000476068 TATP17735 454 aaPredicted RBP18.1■□□□□ 0.49
C1GALT1-207ENST00000476068 LINC00116Q8NCU8 138 aa18.1■□□□□ 0.49
C1GALT1-207ENST00000476068 SMARCC1Q92922 1105 aaPredicted RBP18.1■□□□□ 0.49
C1GALT1-207ENST00000476068 MMP10P09238 476 aa18.09■□□□□ 0.49
C1GALT1-207ENST00000476068 RRS1Q15050 365 aaKnown RBP18.09■□□□□ 0.49
C1GALT1-207ENST00000476068 ARHGAP27Q6ZUM4 889 aa18.09■□□□□ 0.49
C1GALT1-207ENST00000476068 SMG6Q86US8 1419 aaKnown RBP18.08■□□□□ 0.49
C1GALT1-207ENST00000476068 CYP27B1O15528 508 aa18.08■□□□□ 0.48
C1GALT1-207ENST00000476068 SIN3AQ96ST3 1273 aa18.08■□□□□ 0.48
C1GALT1-207ENST00000476068 C10orf71Q711Q0 1435 aa18.07■□□□□ 0.48
C1GALT1-207ENST00000476068 ARFGEF1Q9Y6D6 1849 aa18.07■□□□□ 0.48
C1GALT1-207ENST00000476068 A0A0G2JLW4 131 aa18.07■□□□□ 0.48
C1GALT1-207ENST00000476068 GNPATO15228 680 aa18.07■□□□□ 0.48
C1GALT1-207ENST00000476068 C16orf71Q8IYS4 520 aaPredicted RBP18.07■□□□□ 0.48
C1GALT1-207ENST00000476068 PIGBQ92521 554 aa18.07■□□□□ 0.48
C1GALT1-207ENST00000476068 KCPQ6ZWJ8 1503 aa18.06■□□□□ 0.48
C1GALT1-207ENST00000476068 LOC102724428A0A0B4J2F2 783 aa18.05■□□□□ 0.48
C1GALT1-207ENST00000476068 SIK1P57059 783 aa18.05■□□□□ 0.48
C1GALT1-207ENST00000476068 TGFB2P61812 414 aa18.05■□□□□ 0.48
C1GALT1-207ENST00000476068 FSTL1Q12841 308 aa18.05■□□□□ 0.48
C1GALT1-207ENST00000476068 TNRC6CQ9HCJ0 1690 aaKnown RBP18.05■□□□□ 0.48
C1GALT1-207ENST00000476068 PLEKHG2Q9H7P9 1386 aa18.04■□□□□ 0.48
C1GALT1-207ENST00000476068 C4AP0C0L4 1744 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms