RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 CENPJQ9HC77 1338 aaPredicted RBP20.33■□□□□ 0.85
ATG9A-220ENST00000475339 QRICH2Q9H0J4 1663 aa20.32■□□□□ 0.84
ATG9A-220ENST00000475339 NMRK2Q9NPI5 230 aa20.32■□□□□ 0.84
ATG9A-220ENST00000475339 WDR90Q96KV7 1748 aa20.32■□□□□ 0.84
ATG9A-220ENST00000475339 SLC34A2O95436 690 aa20.31■□□□□ 0.84
ATG9A-220ENST00000475339 ANKRD24Q8TF21 1146 aa20.31■□□□□ 0.84
ATG9A-220ENST00000475339 NSD2O96028 1365 aa20.31■□□□□ 0.84
ATG9A-220ENST00000475339 ANKRD36BQ8N2N9 1353 aa20.31■□□□□ 0.84
ATG9A-220ENST00000475339 LY75O60449 1722 aa20.3■□□□□ 0.84
ATG9A-220ENST00000475339 ZNF692Q9BU19 519 aaPredicted RBP20.3■□□□□ 0.84
ATG9A-220ENST00000475339 TTC21AQ8NDW8 1320 aa20.29■□□□□ 0.84
ATG9A-220ENST00000475339 RBM46Q8TBY0 533 aaKnown RBP20.27■□□□□ 0.84
ATG9A-220ENST00000475339 FLAD1Q8NFF5 587 aa20.25■□□□□ 0.83
ATG9A-220ENST00000475339 USP47Q96K76 1375 aa20.24■□□□□ 0.83
ATG9A-220ENST00000475339 DOT1LQ8TEK3 1739 aa20.22■□□□□ 0.83
ATG9A-220ENST00000475339 C16orf71Q8IYS4 520 aaPredicted RBP20.22■□□□□ 0.83
ATG9A-220ENST00000475339 CICQ96RK0 1608 aaPredicted RBP20.21■□□□□ 0.83
ATG9A-220ENST00000475339 FSTL1Q12841 308 aa20.21■□□□□ 0.83
ATG9A-220ENST00000475339 AMIGO3Q86WK7 504 aa20.21■□□□□ 0.83
ATG9A-220ENST00000475339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.21■□□□□ 0.83
ATG9A-220ENST00000475339 EVC2Q86UK5 1308 aa20.21■□□□□ 0.83
ATG9A-220ENST00000475339 KTN1Q86UP2 1357 aaKnown RBP20.21■□□□□ 0.83
ATG9A-220ENST00000475339 KIAA1210Q9ULL0 1709 aa20.2■□□□□ 0.82
ATG9A-220ENST00000475339 SMIM5Q71RC9 77 aa20.2■□□□□ 0.82
ATG9A-220ENST00000475339 LTV1Q96GA3 475 aaPredicted RBP20.19■□□□□ 0.82
ATG9A-220ENST00000475339 HSPA1AP0DMV8 641 aaKnown RBP20.18■□□□□ 0.82
ATG9A-220ENST00000475339 HSPA1BP0DMV9 641 aaKnown RBP20.18■□□□□ 0.82
ATG9A-220ENST00000475339 NME9Q86XW9 330 aa20.18■□□□□ 0.82
ATG9A-220ENST00000475339 USP31Q70CQ4 1352 aa20.18■□□□□ 0.82
ATG9A-220ENST00000475339 LTN1O94822 1766 aa20.17■□□□□ 0.82
ATG9A-220ENST00000475339 PHF14O94880 888 aa20.17■□□□□ 0.82
ATG9A-220ENST00000475339 ARHGAP27Q6ZUM4 889 aa20.17■□□□□ 0.82
ATG9A-220ENST00000475339 ZCRB1Q8TBF4 217 aaKnown RBP20.17■□□□□ 0.82
ATG9A-220ENST00000475339 BCS1LQ9Y276 419 aa20.17■□□□□ 0.82
ATG9A-220ENST00000475339 C5P01031 1676 aa20.16■□□□□ 0.82
ATG9A-220ENST00000475339 TRIM26Q12899 539 aaPredicted RBP20.15■□□□□ 0.82
ATG9A-220ENST00000475339 USP54Q70EL1 1684 aa20.14■□□□□ 0.81
ATG9A-220ENST00000475339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.14■□□□□ 0.81
ATG9A-220ENST00000475339 AK7Q96M32 723 aa20.14■□□□□ 0.81
ATG9A-220ENST00000475339 PALLDQ8WX93 1383 aa20.12■□□□□ 0.81
ATG9A-220ENST00000475339 IP6K1Q92551 441 aa20.12■□□□□ 0.81
ATG9A-220ENST00000475339 PXDNLA1KZ92 1463 aa20.11■□□□□ 0.81
ATG9A-220ENST00000475339 A0A0G2JLW4 131 aa20.11■□□□□ 0.81
ATG9A-220ENST00000475339 HMGB2P26583 209 aaKnown RBP20.11■□□□□ 0.81
ATG9A-220ENST00000475339 C9orf131Q5VYM1 1079 aa20.11■□□□□ 0.81
ATG9A-220ENST00000475339 RRAGCQ9HB90 399 aa20.1■□□□□ 0.81
ATG9A-220ENST00000475339 TAF1LQ8IZX4 1826 aa20.09■□□□□ 0.81
ATG9A-220ENST00000475339 MEGF6O75095 1541 aa20.09■□□□□ 0.81
ATG9A-220ENST00000475339 TOGARAM1Q9Y4F4 1720 aa20.09■□□□□ 0.81
ATG9A-220ENST00000475339 KCPQ6ZWJ8 1503 aa20.08■□□□□ 0.81
ATG9A-220ENST00000475339 C4BP0C0L5 1744 aa20.08■□□□□ 0.81
ATG9A-220ENST00000475339 MPRIPQ6WCQ1 1025 aa20.08■□□□□ 0.81
ATG9A-220ENST00000475339 SBNO2Q9Y2G9 1366 aa20.08■□□□□ 0.8
ATG9A-220ENST00000475339 KDM2BQ8NHM5 1336 aa20.07■□□□□ 0.8
ATG9A-220ENST00000475339 FCHSD2O94868 740 aa20.07■□□□□ 0.8
ATG9A-220ENST00000475339 MMP10P09238 476 aa20.07■□□□□ 0.8
ATG9A-220ENST00000475339 TGFB2P61812 414 aa20.07■□□□□ 0.8
ATG9A-220ENST00000475339 SMC1BQ8NDV3 1235 aa20.07■□□□□ 0.8
ATG9A-220ENST00000475339 PLEKHG2Q9H7P9 1386 aa20.07■□□□□ 0.8
ATG9A-220ENST00000475339 SSFA2P28290 1259 aa20.06■□□□□ 0.8
ATG9A-220ENST00000475339 MON2Q7Z3U7 1717 aa20.06■□□□□ 0.8
ATG9A-220ENST00000475339 N4BP2Q86UW6 1770 aaPredicted RBP20.05■□□□□ 0.8
ATG9A-220ENST00000475339 UBR3Q6ZT12 1888 aa20.05■□□□□ 0.8
ATG9A-220ENST00000475339 FAM208AQ9UK61 1670 aaKnown RBP20.04■□□□□ 0.8
ATG9A-220ENST00000475339 DPEP1P16444 411 aa20.04■□□□□ 0.8
ATG9A-220ENST00000475339 NSD3Q9BZ95 1437 aa20.03■□□□□ 0.8
ATG9A-220ENST00000475339 KIAA1551Q9HCM1 1747 aa20.03■□□□□ 0.8
ATG9A-220ENST00000475339 PCDH10Q9P2E7 1040 aa20.03■□□□□ 0.8
ATG9A-220ENST00000475339 C10orf71Q711Q0 1435 aa20.02■□□□□ 0.8
ATG9A-220ENST00000475339 HOXC9P31274 260 aa20.01■□□□□ 0.79
ATG9A-220ENST00000475339 LINC00116Q8NCU8 138 aa20.01■□□□□ 0.79
ATG9A-220ENST00000475339 SMARCC1Q92922 1105 aaPredicted RBP20.01■□□□□ 0.79
ATG9A-220ENST00000475339 RNF181Q9P0P0 153 aa20.01■□□□□ 0.79
ATG9A-220ENST00000475339 CD163L1Q9NR16 1453 aa20■□□□□ 0.79
ATG9A-220ENST00000475339 KIF13BQ9NQT8 1826 aa20■□□□□ 0.79
ATG9A-220ENST00000475339 USHBP1Q8N6Y0 703 aa20■□□□□ 0.79
ATG9A-220ENST00000475339 RGPD2P0DJD1 1756 aa19.99■□□□□ 0.79
ATG9A-220ENST00000475339 GNPATO15228 680 aa19.99■□□□□ 0.79
ATG9A-220ENST00000475339 FBLN1P23142 703 aa19.99■□□□□ 0.79
ATG9A-220ENST00000475339 NBPF6Q5VWK0 638 aa19.99■□□□□ 0.79
ATG9A-220ENST00000475339 NBPF4Q96M43 638 aa19.99■□□□□ 0.79
ATG9A-220ENST00000475339 MAP3K19Q56UN5 1328 aa19.99■□□□□ 0.79
ATG9A-220ENST00000475339 AMPHP49418 695 aa19.98■□□□□ 0.79
ATG9A-220ENST00000475339 TMC1Q8TDI8 760 aa19.98■□□□□ 0.79
ATG9A-220ENST00000475339 CGNL1Q0VF96 1302 aa19.98■□□□□ 0.79
ATG9A-220ENST00000475339 KCNA3P22001 575 aa19.97■□□□□ 0.79
ATG9A-220ENST00000475339 RAPGEF4Q8WZA2 1011 aa19.97■□□□□ 0.79
ATG9A-220ENST00000475339 LOC102724428A0A0B4J2F2 783 aa19.96■□□□□ 0.79
ATG9A-220ENST00000475339 SIK1P57059 783 aa19.96■□□□□ 0.79
ATG9A-220ENST00000475339 HDGFL2Q7Z4V5 671 aaPredicted RBP19.96■□□□□ 0.79
ATG9A-220ENST00000475339 PIGBQ92521 554 aa19.96■□□□□ 0.79
ATG9A-220ENST00000475339 PKD1L3Q7Z443 1732 aa19.96■□□□□ 0.79
ATG9A-220ENST00000475339 SLC12A5Q9H2X9 1139 aa19.95■□□□□ 0.78
ATG9A-220ENST00000475339 CCDC87Q9NVE4 849 aa19.95■□□□□ 0.78
ATG9A-220ENST00000475339 PCDH11XQ9BZA7 1347 aa19.95■□□□□ 0.78
ATG9A-220ENST00000475339 PCDH11YQ9BZA8 1340 aa19.95■□□□□ 0.78
ATG9A-220ENST00000475339 EDC4Q6P2E9 1401 aaKnown RBP19.94■□□□□ 0.78
ATG9A-220ENST00000475339 TATP17735 454 aaPredicted RBP19.94■□□□□ 0.78
ATG9A-220ENST00000475339 ITPK1Q13572 414 aa19.94■□□□□ 0.78
ATG9A-220ENST00000475339 FAM161AQ3B820 660 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms