RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 SLC27A3Q5K4L6 730 aa20.1■□□□□ 0.81
COL2A1-205ENST00000474996 ZCRB1Q8TBF4 217 aaKnown RBP20.1■□□□□ 0.81
COL2A1-205ENST00000474996 KIF20BQ96Q89 1820 aa20.1■□□□□ 0.81
COL2A1-205ENST00000474996 NBPF6Q5VWK0 638 aa20.09■□□□□ 0.81
COL2A1-205ENST00000474996 AKT1S1Q96B36 256 aa20.09■□□□□ 0.81
COL2A1-205ENST00000474996 NBPF4Q96M43 638 aa20.09■□□□□ 0.81
COL2A1-205ENST00000474996 NSD2O96028 1365 aa20.08■□□□□ 0.81
COL2A1-205ENST00000474996 QSER1Q2KHR3 1735 aa20.08■□□□□ 0.81
COL2A1-205ENST00000474996 KCNQ4P56696 695 aa20.08■□□□□ 0.81
COL2A1-205ENST00000474996 USHBP1Q8N6Y0 703 aa20.08■□□□□ 0.81
COL2A1-205ENST00000474996 ARXQ96QS3 562 aa20.08■□□□□ 0.81
COL2A1-205ENST00000474996 LY75O60449 1722 aa20.07■□□□□ 0.8
COL2A1-205ENST00000474996 TUBGCP6Q96RT7 1819 aa20.07■□□□□ 0.8
COL2A1-205ENST00000474996 SMG6Q86US8 1419 aaKnown RBP20.06■□□□□ 0.8
COL2A1-205ENST00000474996 CDCA8Q53HL2 280 aa20.05■□□□□ 0.8
COL2A1-205ENST00000474996 PNPLA7Q6ZV29 1317 aa20.04■□□□□ 0.8
COL2A1-205ENST00000474996 HSP90AB2PQ58FF8 381 aa20.04■□□□□ 0.8
COL2A1-205ENST00000474996 RAPGEF4Q8WZA2 1011 aa20.04■□□□□ 0.8
COL2A1-205ENST00000474996 TFCP2L1Q9NZI6 479 aa20.04■□□□□ 0.8
COL2A1-205ENST00000474996 UTRNP46939 3433 aa20.04■□□□□ 0.8
COL2A1-205ENST00000474996 CGNL1Q0VF96 1302 aa20.03■□□□□ 0.8
COL2A1-205ENST00000474996 INSRP06213 1382 aa20.03■□□□□ 0.8
COL2A1-205ENST00000474996 TATP17735 454 aaPredicted RBP20.02■□□□□ 0.8
COL2A1-205ENST00000474996 SLC16A10Q8TF71 515 aa20.02■□□□□ 0.8
COL2A1-205ENST00000474996 FLT4P35916 1363 aa20.02■□□□□ 0.8
COL2A1-205ENST00000474996 MAP3K5Q99683 1374 aa20.02■□□□□ 0.8
COL2A1-205ENST00000474996 COL24A1Q17RW2 1714 aa20.02■□□□□ 0.79
COL2A1-205ENST00000474996 CARD14Q9BXL6 1004 aa20.01■□□□□ 0.79
COL2A1-205ENST00000474996 CCNL1Q9UK58 526 aaPredicted RBP20.01■□□□□ 0.79
COL2A1-205ENST00000474996 CHD4Q14839 1912 aa20.01■□□□□ 0.79
COL2A1-205ENST00000474996 KIF24Q5T7B8 1368 aa20■□□□□ 0.79
COL2A1-205ENST00000474996 NSD3Q9BZ95 1437 aa20■□□□□ 0.79
COL2A1-205ENST00000474996 POLD1P28340 1107 aa19.99■□□□□ 0.79
COL2A1-205ENST00000474996 KLHL34Q8N239 644 aa19.99■□□□□ 0.79
COL2A1-205ENST00000474996 PCDH11XQ9BZA7 1347 aa19.99■□□□□ 0.79
COL2A1-205ENST00000474996 PCDH11YQ9BZA8 1340 aa19.99■□□□□ 0.79
COL2A1-205ENST00000474996 EMILIN1Q9Y6C2 1016 aa19.98■□□□□ 0.79
COL2A1-205ENST00000474996 ZNF784Q8NCA9 323 aaPredicted RBP19.96■□□□□ 0.79
COL2A1-205ENST00000474996 C5P01031 1676 aa19.95■□□□□ 0.78
COL2A1-205ENST00000474996 PKD1L3Q7Z443 1732 aa19.94■□□□□ 0.78
COL2A1-205ENST00000474996 ANKRD26Q9UPS8 1709 aa19.94■□□□□ 0.78
COL2A1-205ENST00000474996 TOGARAM1Q9Y4F4 1720 aa19.94■□□□□ 0.78
COL2A1-205ENST00000474996 PPM1GO15355 546 aaPredicted RBP19.94■□□□□ 0.78
COL2A1-205ENST00000474996 CYP27B1O15528 508 aa19.94■□□□□ 0.78
COL2A1-205ENST00000474996 MSH5O43196 834 aa19.94■□□□□ 0.78
COL2A1-205ENST00000474996 GPR162Q16538 588 aa19.94■□□□□ 0.78
COL2A1-205ENST00000474996 TIMELESSQ9UNS1 1208 aa19.94■□□□□ 0.78
COL2A1-205ENST00000474996 ITGB4P16144 1822 aa19.94■□□□□ 0.78
COL2A1-205ENST00000474996 MAP2P11137 1827 aaKnown RBP19.93■□□□□ 0.78
COL2A1-205ENST00000474996 MPRIPQ6WCQ1 1025 aa19.93■□□□□ 0.78
COL2A1-205ENST00000474996 COL23A1Q86Y22 540 aaPredicted RBP19.93■□□□□ 0.78
COL2A1-205ENST00000474996 PALLDQ8WX93 1383 aa19.93■□□□□ 0.78
COL2A1-205ENST00000474996 TAF1LQ8IZX4 1826 aa19.92■□□□□ 0.78
COL2A1-205ENST00000474996 NLGN2Q8NFZ4 835 aa19.91■□□□□ 0.78
COL2A1-205ENST00000474996 NCAPD2Q15021 1401 aa19.91■□□□□ 0.78
COL2A1-205ENST00000474996 PELP1Q8IZL8 1130 aaKnown RBP19.9■□□□□ 0.78
COL2A1-205ENST00000474996 WASHC2AQ641Q2 1341 aa19.89■□□□□ 0.77
COL2A1-205ENST00000474996 MSL1Q68DK7 614 aa19.89■□□□□ 0.77
COL2A1-205ENST00000474996 POLR3GLQ9BT43 218 aa19.89■□□□□ 0.77
COL2A1-205ENST00000474996 GOLGB1Q14789 3259 aaKnown RBP19.88■□□□□ 0.77
COL2A1-205ENST00000474996 PCGF6Q9BYE7 350 aa19.88■□□□□ 0.77
COL2A1-205ENST00000474996 EYA1Q99502 592 aa19.87■□□□□ 0.77
COL2A1-205ENST00000474996 SPG7Q9UQ90 795 aa19.87■□□□□ 0.77
COL2A1-205ENST00000474996 C4BP0C0L5 1744 aa19.87■□□□□ 0.77
COL2A1-205ENST00000474996 CLSPNQ9HAW4 1339 aa19.86■□□□□ 0.77
COL2A1-205ENST00000474996 PIGBQ92521 554 aa19.86■□□□□ 0.77
COL2A1-205ENST00000474996 SMARCC1Q92922 1105 aaPredicted RBP19.86■□□□□ 0.77
COL2A1-205ENST00000474996 POLKQ9UBT6 870 aa19.86■□□□□ 0.77
COL2A1-205ENST00000474996 HMGB2P26583 209 aaKnown RBP19.85■□□□□ 0.77
COL2A1-205ENST00000474996 NKX1-1Q15270 411 aaPredicted RBP19.85■□□□□ 0.77
COL2A1-205ENST00000474996 TNNT2P45379 298 aaPredicted RBP19.84■□□□□ 0.77
COL2A1-205ENST00000474996 FLAD1Q8NFF5 587 aa19.84■□□□□ 0.77
COL2A1-205ENST00000474996 AMIGO3Q86WK7 504 aa19.83■□□□□ 0.77
COL2A1-205ENST00000474996 AK7Q96M32 723 aa19.83■□□□□ 0.77
COL2A1-205ENST00000474996 UBR3Q6ZT12 1888 aa19.83■□□□□ 0.76
COL2A1-205ENST00000474996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.82■□□□□ 0.76
COL2A1-205ENST00000474996 YBX3P16989 372 aaKnown RBP eCLIP19.81■□□□□ 0.76
COL2A1-205ENST00000474996 EIF4A2Q14240 407 aaKnown RBP19.81■□□□□ 0.76
COL2A1-205ENST00000474996 SMIM5Q71RC9 77 aa19.81■□□□□ 0.76
COL2A1-205ENST00000474996 TMOD3Q9NYL9 352 aa19.81■□□□□ 0.76
COL2A1-205ENST00000474996 LOC102724428A0A0B4J2F2 783 aa19.8■□□□□ 0.76
COL2A1-205ENST00000474996 PHF14O94880 888 aa19.8■□□□□ 0.76
COL2A1-205ENST00000474996 PHKG2P15735 406 aa19.8■□□□□ 0.76
COL2A1-205ENST00000474996 SIK1P57059 783 aa19.8■□□□□ 0.76
COL2A1-205ENST00000474996 IFNL2Q8IZJ0 200 aa19.8■□□□□ 0.76
COL2A1-205ENST00000474996 LINC00116Q8NCU8 138 aa19.79■□□□□ 0.76
COL2A1-205ENST00000474996 ASAP1Q9ULH1 1129 aa19.79■□□□□ 0.76
COL2A1-205ENST00000474996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.78■□□□□ 0.76
COL2A1-205ENST00000474996 HSPA5P11021 654 aaKnown RBP19.78■□□□□ 0.76
COL2A1-205ENST00000474996 EIF4G2P78344 907 aaKnown RBP eCLIP19.78■□□□□ 0.76
COL2A1-205ENST00000474996 CD2APQ9Y5K6 639 aa19.78■□□□□ 0.76
COL2A1-205ENST00000474996 GRIN3BO60391 1043 aa19.77■□□□□ 0.76
COL2A1-205ENST00000474996 C1QTNF8P60827 252 aa19.77■□□□□ 0.76
COL2A1-205ENST00000474996 PANK3Q9H999 370 aa19.77■□□□□ 0.76
COL2A1-205ENST00000474996 ITPK1Q13572 414 aa19.76■□□□□ 0.75
COL2A1-205ENST00000474996 SSFA2P28290 1259 aa19.75■□□□□ 0.75
COL2A1-205ENST00000474996 ATG3Q9NT62 314 aa19.75■□□□□ 0.75
COL2A1-205ENST00000474996 IGSF1Q8N6C5 1336 aa19.75■□□□□ 0.75
COL2A1-205ENST00000474996 ATP6V1AP38606 617 aa19.74■□□□□ 0.75
COL2A1-205ENST00000474996 PLEKHG2Q9H7P9 1386 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms