RNA–Protein interactions for RNA: ENST00000474986.2

YIF1A-206, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 1 (best)

Gene YIF1A, Length 860 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-206ENST00000474986 CCDC125Q86Z20 511 aa30.69■■■□□ 2.5
YIF1A-206ENST00000474986 PRKRIP1Q9H875 184 aaPredicted RBP30.69■■■□□ 2.5
YIF1A-206ENST00000474986 RGPD1P0DJD0 1748 aa30.69■■■□□ 2.5
YIF1A-206ENST00000474986 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.68■■■□□ 2.5
YIF1A-206ENST00000474986 MYBBP1AQ9BQG0 1328 aaKnown RBP30.68■■■□□ 2.5
YIF1A-206ENST00000474986 EP400Q96L91 3159 aa30.66■■■□□ 2.5
YIF1A-206ENST00000474986 SULT6B1Q6IMI4 303 aa30.65■■■□□ 2.5
YIF1A-206ENST00000474986 NUDCQ9Y266 331 aa30.64■■■□□ 2.5
YIF1A-206ENST00000474986 SPG7Q9UQ90 795 aa30.63■■■□□ 2.49
YIF1A-206ENST00000474986 AEBP1Q8IUX7 1158 aa30.62■■■□□ 2.49
YIF1A-206ENST00000474986 DDX54Q8TDD1 881 aaKnown RBP30.62■■■□□ 2.49
YIF1A-206ENST00000474986 PCDH11XQ9BZA7 1347 aa30.62■■■□□ 2.49
YIF1A-206ENST00000474986 PCDH11YQ9BZA8 1340 aa30.62■■■□□ 2.49
YIF1A-206ENST00000474986 U2SURPO15042 1029 aaKnown RBP30.6■■■□□ 2.49
YIF1A-206ENST00000474986 PKD1L3Q7Z443 1732 aa30.59■■■□□ 2.49
YIF1A-206ENST00000474986 AMOTQ4VCS5 1084 aa30.58■■■□□ 2.49
YIF1A-206ENST00000474986 SF3B2Q13435 895 aaKnown RBP30.57■■■□□ 2.48
YIF1A-206ENST00000474986 SHANK3Q9BYB0 1731 aa30.56■■■□□ 2.48
YIF1A-206ENST00000474986 HMOX1P09601 288 aa30.56■■■□□ 2.48
YIF1A-206ENST00000474986 PLEKHO1Q53GL0 409 aaPredicted RBP30.56■■■□□ 2.48
YIF1A-206ENST00000474986 CYP27B1O15528 508 aa30.55■■■□□ 2.48
YIF1A-206ENST00000474986 TRIM37O94972 964 aa30.54■■■□□ 2.48
YIF1A-206ENST00000474986 ANP32CO43423 234 aa30.53■■■□□ 2.48
YIF1A-206ENST00000474986 BCL11BQ9C0K0 894 aaPredicted RBP30.52■■■□□ 2.48
YIF1A-206ENST00000474986 U2AF1L5P0DN76 240 aaPredicted RBP30.51■■■□□ 2.47
YIF1A-206ENST00000474986 U2AF1Q01081 240 aaKnown RBP eCLIP30.51■■■□□ 2.47
YIF1A-206ENST00000474986 NKX1-1Q15270 411 aaPredicted RBP30.51■■■□□ 2.47
YIF1A-206ENST00000474986 IFNL2Q8IZJ0 200 aa30.51■■■□□ 2.47
YIF1A-206ENST00000474986 FCHSD2O94868 740 aa30.49■■■□□ 2.47
YIF1A-206ENST00000474986 PHKG2P15735 406 aa30.49■■■□□ 2.47
YIF1A-206ENST00000474986 BAG6P46379 1132 aa30.48■■■□□ 2.47
YIF1A-206ENST00000474986 RSPH6AQ9H0K4 717 aa30.48■■■□□ 2.47
YIF1A-206ENST00000474986 SBF2Q86WG5 1849 aa30.46■■■□□ 2.47
YIF1A-206ENST00000474986 HSP90AB1P08238 724 aaKnown RBP30.46■■■□□ 2.47
YIF1A-206ENST00000474986 ZNF530Q6P9A1 599 aaPredicted RBP30.46■■■□□ 2.47
YIF1A-206ENST00000474986 ACSBG1Q96GR2 724 aa30.46■■■□□ 2.47
YIF1A-206ENST00000474986 TNS1Q9HBL0 1735 aaKnown RBP30.46■■■□□ 2.47
YIF1A-206ENST00000474986 NHSQ6T4R5 1651 aa30.44■■■□□ 2.46
YIF1A-206ENST00000474986 APBA3O96018 575 aa30.44■■■□□ 2.46
YIF1A-206ENST00000474986 C1orf141Q5JVX7 400 aa30.44■■■□□ 2.46
YIF1A-206ENST00000474986 KCNQ2O43526 872 aa30.43■■■□□ 2.46
YIF1A-206ENST00000474986 PRKAR2BP31323 418 aa30.43■■■□□ 2.46
YIF1A-206ENST00000474986 PRIM1P49642 420 aaKnown RBP30.41■■■□□ 2.46
YIF1A-206ENST00000474986 AKAP4Q5JQC9 854 aa30.41■■■□□ 2.46
YIF1A-206ENST00000474986 DEFB132Q7Z7B7 95 aa30.41■■■□□ 2.46
YIF1A-206ENST00000474986 PLSCR1O15162 318 aa30.4■■■□□ 2.46
YIF1A-206ENST00000474986 PTF1AQ7RTS3 328 aa30.4■■■□□ 2.46
YIF1A-206ENST00000474986 GAS2L2Q8NHY3 880 aa30.4■■■□□ 2.46
YIF1A-206ENST00000474986 DCAF5Q96JK2 942 aa30.4■■■□□ 2.46
YIF1A-206ENST00000474986 PNNQ9H307 717 aaKnown RBP30.4■■■□□ 2.46
YIF1A-206ENST00000474986 MTHFSDQ2M296 383 aaKnown RBP30.39■■■□□ 2.46
YIF1A-206ENST00000474986 DOT1LQ8TEK3 1739 aa30.38■■■□□ 2.45
YIF1A-206ENST00000474986 SYTL4Q96C24 671 aaPredicted RBP30.37■■■□□ 2.45
YIF1A-206ENST00000474986 EN1Q05925 392 aaPredicted RBP30.36■■■□□ 2.45
YIF1A-206ENST00000474986 CAMKK2Q96RR4 588 aa30.36■■■□□ 2.45
YIF1A-206ENST00000474986 WDR43Q15061 677 aaKnown RBP eCLIP30.35■■■□□ 2.45
YIF1A-206ENST00000474986 PHACTR3Q96KR7 559 aa30.35■■■□□ 2.45
YIF1A-206ENST00000474986 ERVV-2B6SEH9 535 aa30.34■■■□□ 2.45
YIF1A-206ENST00000474986 NEFMP07197 916 aa30.34■■■□□ 2.45
YIF1A-206ENST00000474986 KDM6AO15550 1401 aaPredicted RBP30.33■■■□□ 2.45
YIF1A-206ENST00000474986 PLEKHF1Q96S99 279 aa30.33■■■□□ 2.45
YIF1A-206ENST00000474986 RGPD3A6NKT7 1758 aaPredicted RBP30.32■■■□□ 2.44
YIF1A-206ENST00000474986 RGPD4Q7Z3J3 1758 aa30.32■■■□□ 2.44
YIF1A-206ENST00000474986 TOGARAM1Q9Y4F4 1720 aa30.32■■■□□ 2.44
YIF1A-206ENST00000474986 KAT6BQ8WYB5 2073 aa30.31■■■□□ 2.44
YIF1A-206ENST00000474986 MAP3K5Q99683 1374 aa30.3■■■□□ 2.44
YIF1A-206ENST00000474986 EZH2Q15910 746 aaKnown RBP30.3■■■□□ 2.44
YIF1A-206ENST00000474986 MPRIPQ6WCQ1 1025 aa30.3■■■□□ 2.44
YIF1A-206ENST00000474986 BTAF1O14981 1849 aa30.29■■■□□ 2.44
YIF1A-206ENST00000474986 TMOD3Q9NYL9 352 aa30.29■■■□□ 2.44
YIF1A-206ENST00000474986 GNAT3A8MTJ3 354 aa30.28■■■□□ 2.44
YIF1A-206ENST00000474986 PIGBQ92521 554 aa30.28■■■□□ 2.44
YIF1A-206ENST00000474986 MAPK8IP3Q9UPT6 1336 aa30.27■■■□□ 2.44
YIF1A-206ENST00000474986 RNMTO43148 476 aaKnown RBP30.26■■■□□ 2.43
YIF1A-206ENST00000474986 CCDC184Q52MB2 194 aa30.26■■■□□ 2.43
YIF1A-206ENST00000474986 ADAMTS8Q9UP79 889 aa30.26■■■□□ 2.43
YIF1A-206ENST00000474986 MRS2Q9HD23 443 aa30.25■■■□□ 2.43
YIF1A-206ENST00000474986 CABP4P57796 275 aa30.24■■■□□ 2.43
YIF1A-206ENST00000474986 SMARCC1Q92922 1105 aaPredicted RBP30.24■■■□□ 2.43
YIF1A-206ENST00000474986 ADAMTS7Q9UKP4 1686 aa30.23■■■□□ 2.43
YIF1A-206ENST00000474986 HTATSF1O43719 755 aaKnown RBP30.23■■■□□ 2.43
YIF1A-206ENST00000474986 TXNRD1Q16881 649 aa30.23■■■□□ 2.43
YIF1A-206ENST00000474986 LGR6Q9HBX8 967 aa30.23■■■□□ 2.43
YIF1A-206ENST00000474986 ITGB4P16144 1822 aa30.22■■■□□ 2.43
YIF1A-206ENST00000474986 PROM2Q8N271 834 aa30.22■■■□□ 2.43
YIF1A-206ENST00000474986 MRC1P22897 1456 aa30.22■■■□□ 2.43
YIF1A-206ENST00000474986 NFE2L2Q16236 605 aa30.21■■■□□ 2.43
YIF1A-206ENST00000474986 SLC27A3Q5K4L6 730 aa30.21■■■□□ 2.43
YIF1A-206ENST00000474986 SLC52A2Q9HAB3 445 aa30.21■■■□□ 2.43
YIF1A-206ENST00000474986 RREB1Q92766 1687 aa30.2■■■□□ 2.43
YIF1A-206ENST00000474986 PNISRQ8TF01 805 aaKnown RBP30.2■■■□□ 2.43
YIF1A-206ENST00000474986 RUNDC1Q96C34 613 aa30.2■■■□□ 2.43
YIF1A-206ENST00000474986 SCN11AQ9UI33 1791 aa30.2■■■□□ 2.42
YIF1A-206ENST00000474986 CEMIPQ8WUJ3 1361 aa30.19■■■□□ 2.42
YIF1A-206ENST00000474986 PALLDQ8WX93 1383 aa30.19■■■□□ 2.42
YIF1A-206ENST00000474986 DIEXFQ68CQ4 756 aaKnown RBP30.19■■■□□ 2.42
YIF1A-206ENST00000474986 NFATC2IPQ8NCF5 419 aa30.19■■■□□ 2.42
YIF1A-206ENST00000474986 IL17REQ8NFR9 667 aa30.19■■■□□ 2.42
YIF1A-206ENST00000474986 RTF1Q92541 710 aaKnown RBP30.19■■■□□ 2.42
YIF1A-206ENST00000474986 ATG3Q9NT62 314 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms