RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 PSDA5PKW4 1024 aaPredicted RBP9.88□□□□□ -0.83
LSAMP-203ENST00000474851 R3HDM1Q15032 1099 aaKnown RBP9.88□□□□□ -0.83
LSAMP-203ENST00000474851 AMER1Q5JTC6 1135 aaPredicted RBP9.88□□□□□ -0.83
LSAMP-203ENST00000474851 ZCRB1Q8TBF4 217 aaKnown RBP9.88□□□□□ -0.83
LSAMP-203ENST00000474851 DDX54Q8TDD1 881 aaKnown RBP9.88□□□□□ -0.83
LSAMP-203ENST00000474851 BRWD3Q6RI45 1802 aa9.88□□□□□ -0.83
LSAMP-203ENST00000474851 PARD3Q8TEW0 1356 aa9.88□□□□□ -0.83
LSAMP-203ENST00000474851 PPM1GO15355 546 aaPredicted RBP9.87□□□□□ -0.83
LSAMP-203ENST00000474851 TNNT2P45379 298 aaPredicted RBP9.87□□□□□ -0.83
LSAMP-203ENST00000474851 ACSBG1Q96GR2 724 aa9.87□□□□□ -0.83
LSAMP-203ENST00000474851 EYA1Q99502 592 aa9.87□□□□□ -0.83
LSAMP-203ENST00000474851 TNS2Q63HR2 1409 aa9.87□□□□□ -0.83
LSAMP-203ENST00000474851 KNSTRNQ9Y448 316 aa9.86□□□□□ -0.83
LSAMP-203ENST00000474851 EIF4A2Q14240 407 aaKnown RBP9.85□□□□□ -0.83
LSAMP-203ENST00000474851 TXNRD1Q16881 649 aa9.85□□□□□ -0.83
LSAMP-203ENST00000474851 MORC1Q86VD1 984 aa9.85□□□□□ -0.83
LSAMP-203ENST00000474851 MEGF6O75095 1541 aa9.84□□□□□ -0.83
LSAMP-203ENST00000474851 CYP27B1O15528 508 aa9.84□□□□□ -0.83
LSAMP-203ENST00000474851 PRIM1P49642 420 aaKnown RBP9.84□□□□□ -0.83
LSAMP-203ENST00000474851 RAPGEF4Q8WZA2 1011 aa9.84□□□□□ -0.83
LSAMP-203ENST00000474851 ANO8Q9HCE9 1232 aaPredicted RBP9.84□□□□□ -0.83
LSAMP-203ENST00000474851 NSD2O96028 1365 aa9.84□□□□□ -0.83
LSAMP-203ENST00000474851 PARP4Q9UKK3 1724 aaKnown RBP9.83□□□□□ -0.84
LSAMP-203ENST00000474851 TATP17735 454 aaPredicted RBP9.83□□□□□ -0.84
LSAMP-203ENST00000474851 NBPF14Q5TI25 921 aa9.83□□□□□ -0.84
LSAMP-203ENST00000474851 PEAK1Q9H792 1746 aa9.82□□□□□ -0.84
LSAMP-203ENST00000474851 NKX1-1Q15270 411 aaPredicted RBP9.82□□□□□ -0.84
LSAMP-203ENST00000474851 LRRC4BQ9NT99 713 aa9.82□□□□□ -0.84
LSAMP-203ENST00000474851 LRRC37A3O60309 1634 aa9.82□□□□□ -0.84
LSAMP-203ENST00000474851 NCAPD2Q15021 1401 aa9.82□□□□□ -0.84
LSAMP-203ENST00000474851 SMG6Q86US8 1419 aaKnown RBP9.82□□□□□ -0.84
LSAMP-203ENST00000474851 MYOM1P52179 1685 aa9.81□□□□□ -0.84
LSAMP-203ENST00000474851 PDGFDQ9GZP0 370 aaPredicted RBP9.81□□□□□ -0.84
LSAMP-203ENST00000474851 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.81□□□□□ -0.84
LSAMP-203ENST00000474851 IL13P35225 146 aa9.8□□□□□ -0.84
LSAMP-203ENST00000474851 CC2D1BQ5T0F9 858 aaKnown RBP9.8□□□□□ -0.84
LSAMP-203ENST00000474851 IGSF1Q8N6C5 1336 aa9.8□□□□□ -0.84
LSAMP-203ENST00000474851 MTHFSP49914 203 aa9.79□□□□□ -0.84
LSAMP-203ENST00000474851 SLC15A2Q16348 729 aa9.79□□□□□ -0.84
LSAMP-203ENST00000474851 SYTL4Q96C24 671 aaPredicted RBP9.79□□□□□ -0.84
LSAMP-203ENST00000474851 PCDH11XQ9BZA7 1347 aa9.79□□□□□ -0.84
LSAMP-203ENST00000474851 PCDH11YQ9BZA8 1340 aa9.79□□□□□ -0.84
LSAMP-203ENST00000474851 NPC1L1Q9UHC9 1359 aa9.78□□□□□ -0.84
LSAMP-203ENST00000474851 KCNQ4P56696 695 aa9.78□□□□□ -0.84
LSAMP-203ENST00000474851 AEBP1Q8IUX7 1158 aa9.78□□□□□ -0.84
LSAMP-203ENST00000474851 SPG7Q9UQ90 795 aa9.78□□□□□ -0.84
LSAMP-203ENST00000474851 TNS1Q9HBL0 1735 aaKnown RBP9.77□□□□□ -0.85
LSAMP-203ENST00000474851 PHKG2P15735 406 aa9.77□□□□□ -0.85
LSAMP-203ENST00000474851 ZNF827Q17R98 1081 aa9.77□□□□□ -0.85
LSAMP-203ENST00000474851 SLC27A3Q5K4L6 730 aa9.77□□□□□ -0.85
LSAMP-203ENST00000474851 PIGBQ92521 554 aa9.77□□□□□ -0.85
LSAMP-203ENST00000474851 AKT1S1Q96B36 256 aa9.77□□□□□ -0.85
LSAMP-203ENST00000474851 STK32BQ9NY57 414 aa9.77□□□□□ -0.85
LSAMP-203ENST00000474851 ZNF219Q9P2Y4 722 aaPredicted RBP9.77□□□□□ -0.85
LSAMP-203ENST00000474851 FAM208AQ9UK61 1670 aaKnown RBP9.77□□□□□ -0.85
LSAMP-203ENST00000474851 RGPD1P0DJD0 1748 aa9.76□□□□□ -0.85
LSAMP-203ENST00000474851 RGPD5Q99666 1765 aa9.76□□□□□ -0.85
LSAMP-203ENST00000474851 SULT6B1Q6IMI4 303 aa9.76□□□□□ -0.85
LSAMP-203ENST00000474851 MPRIPQ6WCQ1 1025 aa9.76□□□□□ -0.85
LSAMP-203ENST00000474851 IFNL2Q8IZJ0 200 aa9.76□□□□□ -0.85
LSAMP-203ENST00000474851 PLEKHO1Q53GL0 409 aaPredicted RBP9.75□□□□□ -0.85
LSAMP-203ENST00000474851 LTN1O94822 1766 aa9.75□□□□□ -0.85
LSAMP-203ENST00000474851 ZBTB7AO95365 584 aa9.74□□□□□ -0.85
LSAMP-203ENST00000474851 PTGER2P43116 358 aa9.74□□□□□ -0.85
LSAMP-203ENST00000474851 CNGB1Q14028 1251 aaPredicted RBP9.74□□□□□ -0.85
LSAMP-203ENST00000474851 AMOTQ4VCS5 1084 aa9.74□□□□□ -0.85
LSAMP-203ENST00000474851 SPON1Q9HCB6 807 aa9.74□□□□□ -0.85
LSAMP-203ENST00000474851 KDRP35968 1356 aa9.74□□□□□ -0.85
LSAMP-203ENST00000474851 PLEKHG2Q9H7P9 1386 aa9.74□□□□□ -0.85
LSAMP-203ENST00000474851 DIAPH1O60610 1272 aaKnown RBP9.73□□□□□ -0.85
LSAMP-203ENST00000474851 SGIP1Q9BQI5 828 aa9.73□□□□□ -0.85
LSAMP-203ENST00000474851 CCNL1Q9UK58 526 aaPredicted RBP9.73□□□□□ -0.85
LSAMP-203ENST00000474851 ASAP1Q9ULH1 1129 aa9.73□□□□□ -0.85
LSAMP-203ENST00000474851 ATF5Q9Y2D1 282 aaPredicted RBP9.73□□□□□ -0.85
LSAMP-203ENST00000474851 ERVV-2B6SEH9 535 aa9.72□□□□□ -0.85
LSAMP-203ENST00000474851 ZNF530Q6P9A1 599 aaPredicted RBP9.72□□□□□ -0.85
LSAMP-203ENST00000474851 SMARCC1Q92922 1105 aaPredicted RBP9.72□□□□□ -0.85
LSAMP-203ENST00000474851 DCAF5Q96JK2 942 aa9.72□□□□□ -0.85
LSAMP-203ENST00000474851 ATG3Q9NT62 314 aa9.72□□□□□ -0.85
LSAMP-203ENST00000474851 HSP90AB1P08238 724 aaKnown RBP9.71□□□□□ -0.86
LSAMP-203ENST00000474851 HMOX1P09601 288 aa9.71□□□□□ -0.86
LSAMP-203ENST00000474851 MTFR1LQ9H019 292 aa9.71□□□□□ -0.86
LSAMP-203ENST00000474851 TMOD3Q9NYL9 352 aa9.71□□□□□ -0.86
LSAMP-203ENST00000474851 TFCP2L1Q9NZI6 479 aa9.71□□□□□ -0.86
LSAMP-203ENST00000474851 PNPLA7Q6ZV29 1317 aa9.71□□□□□ -0.86
LSAMP-203ENST00000474851 PALLDQ8WX93 1383 aa9.71□□□□□ -0.86
LSAMP-203ENST00000474851 LOC102724428A0A0B4J2F2 783 aa9.7□□□□□ -0.86
LSAMP-203ENST00000474851 PPP2R1AP30153 589 aa9.7□□□□□ -0.86
LSAMP-203ENST00000474851 SIK1P57059 783 aa9.7□□□□□ -0.86
LSAMP-203ENST00000474851 SAMD1Q6SPF0 538 aaPredicted RBP9.7□□□□□ -0.86
LSAMP-203ENST00000474851 AMIGO3Q86WK7 504 aa9.7□□□□□ -0.86
LSAMP-203ENST00000474851 SLC4A9Q96Q91 983 aa9.7□□□□□ -0.86
LSAMP-203ENST00000474851 ITPK1Q13572 414 aa9.69□□□□□ -0.86
LSAMP-203ENST00000474851 MTHFSDQ2M296 383 aaKnown RBP9.69□□□□□ -0.86
LSAMP-203ENST00000474851 NHSQ6T4R5 1651 aa9.69□□□□□ -0.86
LSAMP-203ENST00000474851 COL23A1Q86Y22 540 aaPredicted RBP9.69□□□□□ -0.86
LSAMP-203ENST00000474851 NFATC2IPQ8NCF5 419 aa9.69□□□□□ -0.86
LSAMP-203ENST00000474851 SLC16A10Q8TF71 515 aa9.69□□□□□ -0.86
LSAMP-203ENST00000474851 RREB1Q92766 1687 aa9.69□□□□□ -0.86
LSAMP-203ENST00000474851 KIF20BQ96Q89 1820 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms