RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 SLIT3O75094 1523 aa26.79■■□□□ 1.88
SH3D21-202ENST00000474766 AFF2P51816 1311 aa26.78■■□□□ 1.88
SH3D21-202ENST00000474766 PLCH1Q4KWH8 1693 aa26.77■■□□□ 1.88
SH3D21-202ENST00000474766 NGLY1Q96IV0 654 aa26.77■■□□□ 1.88
SH3D21-202ENST00000474766 BCL2L13Q9BXK5 485 aa26.77■■□□□ 1.88
SH3D21-202ENST00000474766 TNNQ9UQP3 1299 aa26.77■■□□□ 1.88
SH3D21-202ENST00000474766 ANTXR1Q9H6X2 564 aa26.76■■□□□ 1.87
SH3D21-202ENST00000474766 FCHSD2O94868 740 aa26.75■■□□□ 1.87
SH3D21-202ENST00000474766 USP31Q70CQ4 1352 aa26.75■■□□□ 1.87
SH3D21-202ENST00000474766 TSR2Q969E8 191 aaKnown RBP26.75■■□□□ 1.87
SH3D21-202ENST00000474766 POLKQ9UBT6 870 aa26.75■■□□□ 1.87
SH3D21-202ENST00000474766 GCP02774 474 aa26.73■■□□□ 1.87
SH3D21-202ENST00000474766 OVOS2A0A0J9YW53 1432 aa26.73■■□□□ 1.87
SH3D21-202ENST00000474766 OVOS2Q6IE36 1432 aa26.73■■□□□ 1.87
SH3D21-202ENST00000474766 KIAA0232Q92628 1395 aa26.73■■□□□ 1.87
SH3D21-202ENST00000474766 FAM83GA6ND36 823 aa26.73■■□□□ 1.87
SH3D21-202ENST00000474766 RIPK4P57078 832 aa26.73■■□□□ 1.87
SH3D21-202ENST00000474766 PCDHB15Q9Y5E8 787 aa26.73■■□□□ 1.87
SH3D21-202ENST00000474766 SLIT2O94813 1529 aa26.73■■□□□ 1.87
SH3D21-202ENST00000474766 COL14A1Q05707 1796 aaKnown RBP26.72■■□□□ 1.87
SH3D21-202ENST00000474766 ZC3H6P61129 1189 aaKnown RBP26.72■■□□□ 1.87
SH3D21-202ENST00000474766 EXOSC9Q06265 439 aaKnown RBP26.72■■□□□ 1.87
SH3D21-202ENST00000474766 ZKSCAN2Q63HK3 967 aa26.72■■□□□ 1.87
SH3D21-202ENST00000474766 FNBP4Q8N3X1 1017 aaPredicted RBP26.72■■□□□ 1.87
SH3D21-202ENST00000474766 RRAGDQ9NQL2 400 aaPredicted RBP26.71■■□□□ 1.87
SH3D21-202ENST00000474766 BCL9LQ86UU0 1499 aa26.71■■□□□ 1.87
SH3D21-202ENST00000474766 NFAT5O94916 1531 aa26.7■■□□□ 1.87
SH3D21-202ENST00000474766 NWD2Q9ULI1 1742 aa26.7■■□□□ 1.87
SH3D21-202ENST00000474766 MVPQ14764 893 aaKnown RBP26.7■■□□□ 1.87
SH3D21-202ENST00000474766 POTEAQ6S8J7 498 aa26.7■■□□□ 1.87
SH3D21-202ENST00000474766 UPF2Q9HAU5 1272 aaKnown RBP26.7■■□□□ 1.86
SH3D21-202ENST00000474766 MAP2P11137 1827 aaKnown RBP26.69■■□□□ 1.86
SH3D21-202ENST00000474766 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.68■■□□□ 1.86
SH3D21-202ENST00000474766 PRDM11Q9NQV5 511 aa26.68■■□□□ 1.86
SH3D21-202ENST00000474766 CPDO75976 1380 aa26.68■■□□□ 1.86
SH3D21-202ENST00000474766 NRAPQ86VF7 1730 aa26.68■■□□□ 1.86
SH3D21-202ENST00000474766 SOX12O15370 315 aa26.68■■□□□ 1.86
SH3D21-202ENST00000474766 CHRNA2Q15822 529 aa26.68■■□□□ 1.86
SH3D21-202ENST00000474766 ZNF772Q68DY9 489 aaPredicted RBP26.68■■□□□ 1.86
SH3D21-202ENST00000474766 COG3Q96JB2 828 aa26.68■■□□□ 1.86
SH3D21-202ENST00000474766 USP21Q9UK80 565 aa26.68■■□□□ 1.86
SH3D21-202ENST00000474766 DZIP1LQ8IYY4 767 aaKnown RBP26.67■■□□□ 1.86
SH3D21-202ENST00000474766 SEC24BO95487 1268 aa26.66■■□□□ 1.86
SH3D21-202ENST00000474766 AATKQ6ZMQ8 1374 aa26.66■■□□□ 1.86
SH3D21-202ENST00000474766 LMO7Q8WWI1 1683 aa26.66■■□□□ 1.86
SH3D21-202ENST00000474766 FSD2A1L4K1 749 aa26.66■■□□□ 1.86
SH3D21-202ENST00000474766 SSH1Q8WYL5 1049 aa26.66■■□□□ 1.86
SH3D21-202ENST00000474766 TBC1D32Q96NH3 1257 aa26.66■■□□□ 1.86
SH3D21-202ENST00000474766 SMC4Q9NTJ3 1288 aa26.66■■□□□ 1.86
SH3D21-202ENST00000474766 FBLN1P23142 703 aa26.65■■□□□ 1.86
SH3D21-202ENST00000474766 CDK12Q9NYV4 1490 aaPredicted RBP26.64■■□□□ 1.86
SH3D21-202ENST00000474766 RWDD1Q9H446 243 aaPredicted RBP26.64■■□□□ 1.86
SH3D21-202ENST00000474766 LTN1O94822 1766 aa26.63■■□□□ 1.85
SH3D21-202ENST00000474766 COL18A1P39060 1754 aa26.63■■□□□ 1.85
SH3D21-202ENST00000474766 PRKAR2BP31323 418 aa26.63■■□□□ 1.85
SH3D21-202ENST00000474766 KCNH5Q8NCM2 988 aa26.63■■□□□ 1.85
SH3D21-202ENST00000474766 FTSJ3Q8IY81 847 aaKnown RBP26.63■■□□□ 1.85
SH3D21-202ENST00000474766 SLKQ9H2G2 1235 aaPredicted RBP26.63■■□□□ 1.85
SH3D21-202ENST00000474766 TRIM27P14373 513 aa26.62■■□□□ 1.85
SH3D21-202ENST00000474766 BTG4Q9NY30 223 aa26.62■■□□□ 1.85
SH3D21-202ENST00000474766 GOLGA6L3A6NEY3 463 aa26.61■■□□□ 1.85
SH3D21-202ENST00000474766 GLIPR1L2Q4G1C9 344 aa26.61■■□□□ 1.85
SH3D21-202ENST00000474766 UNC5CLQ8IV45 518 aa26.61■■□□□ 1.85
SH3D21-202ENST00000474766 CAMTA1Q9Y6Y1 1673 aa26.61■■□□□ 1.85
SH3D21-202ENST00000474766 ATRNO75882 1429 aa26.61■■□□□ 1.85
SH3D21-202ENST00000474766 IL13P35225 146 aa26.61■■□□□ 1.85
SH3D21-202ENST00000474766 ATF7IPQ6VMQ6 1270 aa26.61■■□□□ 1.85
SH3D21-202ENST00000474766 ZBTB7CA1YPR0 619 aa26.6■■□□□ 1.85
SH3D21-202ENST00000474766 CLCN1P35523 988 aa26.6■■□□□ 1.85
SH3D21-202ENST00000474766 QTRT2Q9H974 415 aaKnown RBP26.6■■□□□ 1.85
SH3D21-202ENST00000474766 EMILIN1Q9Y6C2 1016 aa26.6■■□□□ 1.85
SH3D21-202ENST00000474766 RGPD5Q99666 1765 aa26.6■■□□□ 1.85
SH3D21-202ENST00000474766 ARHGEF25Q86VW2 580 aa26.6■■□□□ 1.85
SH3D21-202ENST00000474766 ILDR2Q71H61 639 aa26.59■■□□□ 1.85
SH3D21-202ENST00000474766 NFE2L2Q16236 605 aa26.58■■□□□ 1.85
SH3D21-202ENST00000474766 TBC1D2Q9BYX2 928 aa26.58■■□□□ 1.85
SH3D21-202ENST00000474766 XRCC6P12956 609 aaKnown RBP eCLIP26.58■■□□□ 1.852e-6■■□□□ 11.7
SH3D21-202ENST00000474766 ALDH1L2Q3SY69 923 aa26.58■■□□□ 1.85
SH3D21-202ENST00000474766 PDZRN3Q9UPQ7 1066 aa26.58■■□□□ 1.85
SH3D21-202ENST00000474766 PHACTR3Q96KR7 559 aa26.57■■□□□ 1.84
SH3D21-202ENST00000474766 TRPC5Q9UL62 973 aaPredicted RBP26.57■■□□□ 1.84
SH3D21-202ENST00000474766 DDX19BQ9UMR2 479 aa26.57■■□□□ 1.84
SH3D21-202ENST00000474766 ZNF428Q96B54 188 aa26.56■■□□□ 1.84
SH3D21-202ENST00000474766 PKNOX2Q96KN3 472 aa26.56■■□□□ 1.84
SH3D21-202ENST00000474766 NOB1Q9ULX3 412 aaKnown RBP26.56■■□□□ 1.84
SH3D21-202ENST00000474766 KIF16BQ96L93 1317 aa26.56■■□□□ 1.84
SH3D21-202ENST00000474766 MCM4P33991 863 aa26.55■■□□□ 1.84
SH3D21-202ENST00000474766 BRPF1P55201 1214 aaPredicted RBP26.55■■□□□ 1.84
SH3D21-202ENST00000474766 ISY1Q9ULR0 285 aaKnown RBP26.55■■□□□ 1.84
SH3D21-202ENST00000474766 GLI3P10071 1580 aa26.54■■□□□ 1.84
SH3D21-202ENST00000474766 AXIN2Q9Y2T1 843 aa26.54■■□□□ 1.84
SH3D21-202ENST00000474766 IPO8O15397 1037 aaKnown RBP26.53■■□□□ 1.84
SH3D21-202ENST00000474766 HMOX1P09601 288 aa26.53■■□□□ 1.84
SH3D21-202ENST00000474766 HDAC1Q13547 482 aaPredicted RBP26.53■■□□□ 1.84
SH3D21-202ENST00000474766 RRS1Q15050 365 aaKnown RBP26.53■■□□□ 1.84
SH3D21-202ENST00000474766 COL5A2P05997 1499 aaPredicted RBP26.53■■□□□ 1.84
SH3D21-202ENST00000474766 CALD1Q05682 793 aaKnown RBP26.53■■□□□ 1.84
SH3D21-202ENST00000474766 ABCC6O95255 1503 aa26.52■■□□□ 1.84
SH3D21-202ENST00000474766 VPS72Q15906 364 aa26.52■■□□□ 1.84
SH3D21-202ENST00000474766 STRN4Q9NRL3 753 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms