RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 EYA1Q99502 592 aa21.83■■□□□ 1.09
ITGB1-210ENST00000474568 MAP2P11137 1827 aaKnown RBP21.81■■□□□ 1.08
ITGB1-210ENST00000474568 R3HDM1Q15032 1099 aaKnown RBP21.8■■□□□ 1.08
ITGB1-210ENST00000474568 PARD3Q8TEW0 1356 aa21.79■■□□□ 1.08
ITGB1-210ENST00000474568 SBF2Q86WG5 1849 aa21.78■■□□□ 1.08
ITGB1-210ENST00000474568 SYTL4Q96C24 671 aaPredicted RBP21.78■■□□□ 1.08
ITGB1-210ENST00000474568 PLSCR1O15162 318 aa21.77■■□□□ 1.08
ITGB1-210ENST00000474568 PRIM1P49642 420 aaKnown RBP21.75■■□□□ 1.07
ITGB1-210ENST00000474568 NCAPD2Q15021 1401 aa21.74■■□□□ 1.07
ITGB1-210ENST00000474568 MTHFSP49914 203 aa21.74■■□□□ 1.07
ITGB1-210ENST00000474568 NBPF14Q5TI25 921 aa21.74■■□□□ 1.07
ITGB1-210ENST00000474568 PROM2Q8N271 834 aa21.74■■□□□ 1.07
ITGB1-210ENST00000474568 PCDH11XQ9BZA7 1347 aa21.74■■□□□ 1.07
ITGB1-210ENST00000474568 PCDH11YQ9BZA8 1340 aa21.74■■□□□ 1.07
ITGB1-210ENST00000474568 NHSQ6T4R5 1651 aa21.73■■□□□ 1.07
ITGB1-210ENST00000474568 CYP27B1O15528 508 aa21.73■■□□□ 1.07
ITGB1-210ENST00000474568 TXNRD1Q16881 649 aa21.72■■□□□ 1.07
ITGB1-210ENST00000474568 IGSF1Q8N6C5 1336 aa21.72■■□□□ 1.07
ITGB1-210ENST00000474568 RREB1Q92766 1687 aa21.72■■□□□ 1.07
ITGB1-210ENST00000474568 SHANK3Q9BYB0 1731 aa21.72■■□□□ 1.07
ITGB1-210ENST00000474568 AEBP1Q8IUX7 1158 aa21.71■■□□□ 1.07
ITGB1-210ENST00000474568 SPG7Q9UQ90 795 aa21.71■■□□□ 1.07
ITGB1-210ENST00000474568 NUP188Q5SRE5 1749 aa21.71■■□□□ 1.07
ITGB1-210ENST00000474568 ANO8Q9HCE9 1232 aaPredicted RBP21.7■■□□□ 1.06
ITGB1-210ENST00000474568 IL13P35225 146 aa21.69■■□□□ 1.06
ITGB1-210ENST00000474568 NPC1L1Q9UHC9 1359 aa21.69■■□□□ 1.06
ITGB1-210ENST00000474568 KAT6BQ8WYB5 2073 aa21.67■■□□□ 1.06
ITGB1-210ENST00000474568 DOT1LQ8TEK3 1739 aa21.67■■□□□ 1.06
ITGB1-210ENST00000474568 SULT6B1Q6IMI4 303 aa21.67■■□□□ 1.06
ITGB1-210ENST00000474568 BTAF1O14981 1849 aa21.66■■□□□ 1.06
ITGB1-210ENST00000474568 KCNQ4P56696 695 aa21.65■■□□□ 1.06
ITGB1-210ENST00000474568 MPRIPQ6WCQ1 1025 aa21.65■■□□□ 1.06
ITGB1-210ENST00000474568 RGPD3A6NKT7 1758 aaPredicted RBP21.64■■□□□ 1.06
ITGB1-210ENST00000474568 RGPD4Q7Z3J3 1758 aa21.64■■□□□ 1.06
ITGB1-210ENST00000474568 DIAPH1O60610 1272 aaKnown RBP21.63■■□□□ 1.05
ITGB1-210ENST00000474568 HMOX1P09601 288 aa21.63■■□□□ 1.05
ITGB1-210ENST00000474568 PHKG2P15735 406 aa21.63■■□□□ 1.05
ITGB1-210ENST00000474568 IFNL2Q8IZJ0 200 aa21.63■■□□□ 1.05
ITGB1-210ENST00000474568 STK32BQ9NY57 414 aa21.63■■□□□ 1.05
ITGB1-210ENST00000474568 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.63■■□□□ 1.058e-14■□□□□ 11.3
ITGB1-210ENST00000474568 SRCAPQ6ZRS2 3230 aa21.63■■□□□ 1.05
ITGB1-210ENST00000474568 PKD1L3Q7Z443 1732 aa21.63■■□□□ 1.05
ITGB1-210ENST00000474568 PLEKHO1Q53GL0 409 aaPredicted RBP21.62■■□□□ 1.05
ITGB1-210ENST00000474568 LRRC4BQ9NT99 713 aa21.62■■□□□ 1.05
ITGB1-210ENST00000474568 ZNF530Q6P9A1 599 aaPredicted RBP21.61■■□□□ 1.05
ITGB1-210ENST00000474568 NKX1-1Q15270 411 aaPredicted RBP21.6■■□□□ 1.05
ITGB1-210ENST00000474568 U2SURPO15042 1029 aaKnown RBP21.59■■□□□ 1.05
ITGB1-210ENST00000474568 SLC15A2Q16348 729 aa21.59■■□□□ 1.05
ITGB1-210ENST00000474568 PDGFDQ9GZP0 370 aaPredicted RBP21.59■■□□□ 1.05
ITGB1-210ENST00000474568 PPP2R1AP30153 589 aa21.58■■□□□ 1.05
ITGB1-210ENST00000474568 PIGBQ92521 554 aa21.58■■□□□ 1.05
ITGB1-210ENST00000474568 CCNL1Q9UK58 526 aaPredicted RBP21.58■■□□□ 1.05
ITGB1-210ENST00000474568 ZNF827Q17R98 1081 aa21.57■■□□□ 1.04
ITGB1-210ENST00000474568 AMOTQ4VCS5 1084 aa21.57■■□□□ 1.04
ITGB1-210ENST00000474568 SLC27A3Q5K4L6 730 aa21.57■■□□□ 1.04
ITGB1-210ENST00000474568 KDRP35968 1356 aa21.57■■□□□ 1.04
ITGB1-210ENST00000474568 TOGARAM1Q9Y4F4 1720 aa21.57■■□□□ 1.04
ITGB1-210ENST00000474568 DDX10Q13206 875 aaKnown RBP21.56■■□□□ 1.04
ITGB1-210ENST00000474568 TMOD3Q9NYL9 352 aa21.56■■□□□ 1.04
ITGB1-210ENST00000474568 COL3A1P02461 1466 aaPredicted RBP21.56■■□□□ 1.04
ITGB1-210ENST00000474568 C1orf141Q5JVX7 400 aa21.55■■□□□ 1.04
ITGB1-210ENST00000474568 CFAP53Q96M91 514 aa21.55■■□□□ 1.04
ITGB1-210ENST00000474568 PALLDQ8WX93 1383 aa21.55■■□□□ 1.04
ITGB1-210ENST00000474568 PLEKHG2Q9H7P9 1386 aa21.53■■□□□ 1.04
ITGB1-210ENST00000474568 ZBTB7AO95365 584 aa21.53■■□□□ 1.04
ITGB1-210ENST00000474568 ZEB1P37275 1124 aaPredicted RBP21.53■■□□□ 1.04
ITGB1-210ENST00000474568 HSP90AB1P08238 724 aaKnown RBP21.52■■□□□ 1.04
ITGB1-210ENST00000474568 DCAF5Q96JK2 942 aa21.52■■□□□ 1.04
ITGB1-210ENST00000474568 SMARCC1Q92922 1105 aaPredicted RBP21.51■■□□□ 1.03
ITGB1-210ENST00000474568 AKT1S1Q96B36 256 aa21.51■■□□□ 1.03
ITGB1-210ENST00000474568 ASAP1Q9ULH1 1129 aa21.51■■□□□ 1.03
ITGB1-210ENST00000474568 KDM6AO15550 1401 aaPredicted RBP21.51■■□□□ 1.03
ITGB1-210ENST00000474568 PAPPAQ13219 1627 aa21.51■■□□□ 1.03
ITGB1-210ENST00000474568 LRP5O75197 1615 aa21.5■■□□□ 1.03
ITGB1-210ENST00000474568 CABP4P57796 275 aa21.49■■□□□ 1.03
ITGB1-210ENST00000474568 SPON1Q9HCB6 807 aa21.49■■□□□ 1.03
ITGB1-210ENST00000474568 TFCP2L1Q9NZI6 479 aa21.49■■□□□ 1.03
ITGB1-210ENST00000474568 ATF5Q9Y2D1 282 aaPredicted RBP21.49■■□□□ 1.03
ITGB1-210ENST00000474568 ERVV-2B6SEH9 535 aa21.48■■□□□ 1.03
ITGB1-210ENST00000474568 MTHFSDQ2M296 383 aaKnown RBP21.48■■□□□ 1.03
ITGB1-210ENST00000474568 AKAP4Q5JQC9 854 aa21.47■■□□□ 1.03
ITGB1-210ENST00000474568 ATG3Q9NT62 314 aa21.47■■□□□ 1.03
ITGB1-210ENST00000474568 NUDCQ9Y266 331 aa21.47■■□□□ 1.03
ITGB1-210ENST00000474568 ITGB4P16144 1822 aa21.47■■□□□ 1.03
ITGB1-210ENST00000474568 LY75O60449 1722 aa21.46■■□□□ 1.03
ITGB1-210ENST00000474568 U2AF1L5P0DN76 240 aaPredicted RBP21.46■■□□□ 1.03
ITGB1-210ENST00000474568 U2AF1Q01081 240 aaKnown RBP eCLIP21.46■■□□□ 1.03
ITGB1-210ENST00000474568 PPP1R1BQ9UD71 204 aaPredicted RBP21.46■■□□□ 1.03
ITGB1-210ENST00000474568 LOC102724428A0A0B4J2F2 783 aa21.45■■□□□ 1.02
ITGB1-210ENST00000474568 SIK1P57059 783 aa21.45■■□□□ 1.02
ITGB1-210ENST00000474568 LGR6Q9HBX8 967 aa21.45■■□□□ 1.02
ITGB1-210ENST00000474568 PNPLA7Q6ZV29 1317 aa21.45■■□□□ 1.02
ITGB1-210ENST00000474568 CASZ1Q86V15 1759 aa21.44■■□□□ 1.02
ITGB1-210ENST00000474568 PRKAR2BP31323 418 aa21.44■■□□□ 1.02
ITGB1-210ENST00000474568 NFATC2IPQ8NCF5 419 aa21.44■■□□□ 1.02
ITGB1-210ENST00000474568 RBM42Q9BTD8 480 aaKnown RBP21.44■■□□□ 1.02
ITGB1-210ENST00000474568 MSH5O43196 834 aa21.43■■□□□ 1.02
ITGB1-210ENST00000474568 ATP6V1AP38606 617 aa21.42■■□□□ 1.02
ITGB1-210ENST00000474568 RSPH6AQ9H0K4 717 aa21.42■■□□□ 1.02
ITGB1-210ENST00000474568 RNMTO43148 476 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms