RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 ACSBG1Q96GR2 724 aa27.98■■■□□ 2.07
SNX13-206ENST00000474067 KIF7Q2M1P5 1343 aa27.97■■■□□ 2.07
SNX13-206ENST00000474067 PCDH11XQ9BZA7 1347 aa27.97■■■□□ 2.07
SNX13-206ENST00000474067 PCDH11YQ9BZA8 1340 aa27.97■■■□□ 2.07
SNX13-206ENST00000474067 POLKQ9UBT6 870 aa27.97■■■□□ 2.07
SNX13-206ENST00000474067 MEGF6O75095 1541 aa27.97■■■□□ 2.07
SNX13-206ENST00000474067 PLEKHG2Q9H7P9 1386 aa27.96■■■□□ 2.07
SNX13-206ENST00000474067 TNNT2P45379 298 aaPredicted RBP27.94■■■□□ 2.06
SNX13-206ENST00000474067 TXNRD1Q16881 649 aa27.94■■■□□ 2.06
SNX13-206ENST00000474067 KCNQ2O43526 872 aa27.93■■■□□ 2.06
SNX13-206ENST00000474067 USHBP1Q8N6Y0 703 aa27.93■■■□□ 2.06
SNX13-206ENST00000474067 KAT6BQ8WYB5 2073 aa27.92■■■□□ 2.06
SNX13-206ENST00000474067 STK32BQ9NY57 414 aa27.92■■■□□ 2.06
SNX13-206ENST00000474067 SPG7Q9UQ90 795 aa27.92■■■□□ 2.06
SNX13-206ENST00000474067 SYTL4Q96C24 671 aaPredicted RBP27.91■■■□□ 2.06
SNX13-206ENST00000474067 NCAPD2Q15021 1401 aa27.91■■■□□ 2.06
SNX13-206ENST00000474067 PTF1AQ7RTS3 328 aa27.9■■■□□ 2.06
SNX13-206ENST00000474067 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.9■■■□□ 2.065e-6■■■■□ 22.9
SNX13-206ENST00000474067 BTAF1O14981 1849 aa27.9■■■□□ 2.06
SNX13-206ENST00000474067 SLC27A3Q5K4L6 730 aa27.89■■■□□ 2.06
SNX13-206ENST00000474067 SHANK3Q9BYB0 1731 aa27.87■■■□□ 2.05
SNX13-206ENST00000474067 EYA1Q99502 592 aa27.86■■■□□ 2.05
SNX13-206ENST00000474067 DOT1LQ8TEK3 1739 aa27.86■■■□□ 2.05
SNX13-206ENST00000474067 PRIM1P49642 420 aaKnown RBP27.85■■■□□ 2.05
SNX13-206ENST00000474067 PROM2Q8N271 834 aa27.85■■■□□ 2.05
SNX13-206ENST00000474067 EIF4A2Q14240 407 aaKnown RBP27.84■■■□□ 2.05
SNX13-206ENST00000474067 SPON1Q9HCB6 807 aa27.84■■■□□ 2.05
SNX13-206ENST00000474067 AMER1Q5JTC6 1135 aaPredicted RBP27.83■■■□□ 2.05
SNX13-206ENST00000474067 PKD1L3Q7Z443 1732 aa27.83■■■□□ 2.05
SNX13-206ENST00000474067 SLC15A2Q16348 729 aa27.82■■■□□ 2.04
SNX13-206ENST00000474067 IGSF1Q8N6C5 1336 aa27.8■■■□□ 2.04
SNX13-206ENST00000474067 NPC1L1Q9UHC9 1359 aa27.8■■■□□ 2.04
SNX13-206ENST00000474067 ANO8Q9HCE9 1232 aaPredicted RBP27.79■■■□□ 2.04
SNX13-206ENST00000474067 IFNL2Q8IZJ0 200 aa27.78■■■□□ 2.04
SNX13-206ENST00000474067 PPP1R1BQ9UD71 204 aaPredicted RBP27.77■■■□□ 2.04
SNX13-206ENST00000474067 CYP27B1O15528 508 aa27.76■■■□□ 2.03
SNX13-206ENST00000474067 PER1O15534 1290 aaPredicted RBP27.76■■■□□ 2.03
SNX13-206ENST00000474067 HSP90AB1P08238 724 aaKnown RBP27.76■■■□□ 2.03
SNX13-206ENST00000474067 NKX1-1Q15270 411 aaPredicted RBP27.76■■■□□ 2.03
SNX13-206ENST00000474067 AMOTQ4VCS5 1084 aa27.76■■■□□ 2.03
SNX13-206ENST00000474067 SMARCC1Q92922 1105 aaPredicted RBP27.76■■■□□ 2.03
SNX13-206ENST00000474067 PLEKHO1Q53GL0 409 aaPredicted RBP27.75■■■□□ 2.03
SNX13-206ENST00000474067 PAPPAQ13219 1627 aa27.72■■■□□ 2.03
SNX13-206ENST00000474067 CCNL1Q9UK58 526 aaPredicted RBP27.72■■■□□ 2.03
SNX13-206ENST00000474067 LY75O60449 1722 aa27.72■■■□□ 2.03
SNX13-206ENST00000474067 CC2D1BQ5T0F9 858 aaKnown RBP27.71■■■□□ 2.03
SNX13-206ENST00000474067 MPRIPQ6WCQ1 1025 aa27.71■■■□□ 2.03
SNX13-206ENST00000474067 CASZ1Q86V15 1759 aa27.71■■■□□ 2.03
SNX13-206ENST00000474067 PHKG2P15735 406 aa27.7■■■□□ 2.02
SNX13-206ENST00000474067 MTHFSP49914 203 aa27.69■■■□□ 2.02
SNX13-206ENST00000474067 MTFR1LQ9H019 292 aa27.69■■■□□ 2.02
SNX13-206ENST00000474067 TMOD3Q9NYL9 352 aa27.69■■■□□ 2.02
SNX13-206ENST00000474067 SLC16A10Q8TF71 515 aa27.68■■■□□ 2.02
SNX13-206ENST00000474067 LRRC4BQ9NT99 713 aa27.68■■■□□ 2.02
SNX13-206ENST00000474067 C1orf141Q5JVX7 400 aa27.67■■■□□ 2.02
SNX13-206ENST00000474067 PALLDQ8WX93 1383 aa27.67■■■□□ 2.02
SNX13-206ENST00000474067 DCAF8L1A6NGE4 600 aa27.66■■■□□ 2.02
SNX13-206ENST00000474067 TFCP2L1Q9NZI6 479 aa27.66■■■□□ 2.02
SNX13-206ENST00000474067 KDRP35968 1356 aa27.65■■■□□ 2.02
SNX13-206ENST00000474067 QSER1Q2KHR3 1735 aa27.65■■■□□ 2.02
SNX13-206ENST00000474067 IL13P35225 146 aa27.65■■■□□ 2.02
SNX13-206ENST00000474067 SULT6B1Q6IMI4 303 aa27.65■■■□□ 2.02
SNX13-206ENST00000474067 AKT1S1Q96B36 256 aa27.65■■■□□ 2.02
SNX13-206ENST00000474067 DCAF5Q96JK2 942 aa27.65■■■□□ 2.02
SNX13-206ENST00000474067 ITGB4P16144 1822 aa27.63■■■□□ 2.01
SNX13-206ENST00000474067 ERVV-2B6SEH9 535 aa27.63■■■□□ 2.01
SNX13-206ENST00000474067 DIAPH1O60610 1272 aaKnown RBP27.63■■■□□ 2.01
SNX13-206ENST00000474067 ZBTB7AO95365 584 aa27.62■■■□□ 2.01
SNX13-206ENST00000474067 ZNF530Q6P9A1 599 aaPredicted RBP27.62■■■□□ 2.01
SNX13-206ENST00000474067 FLAD1Q8NFF5 587 aa27.62■■■□□ 2.01
SNX13-206ENST00000474067 CFAP53Q96M91 514 aa27.62■■■□□ 2.01
SNX13-206ENST00000474067 TOGARAM1Q9Y4F4 1720 aa27.61■■■□□ 2.01
SNX13-206ENST00000474067 ZNF827Q17R98 1081 aa27.6■■■□□ 2.01
SNX13-206ENST00000474067 PIGBQ92521 554 aa27.6■■■□□ 2.01
SNX13-206ENST00000474067 SRCAPQ6ZRS2 3230 aa27.6■■■□□ 2.01
SNX13-206ENST00000474067 POLD1P28340 1107 aa27.57■■■□□ 2
SNX13-206ENST00000474067 C5P01031 1676 aa27.56■■■□□ 2
SNX13-206ENST00000474067 ATF5Q9Y2D1 282 aaPredicted RBP27.56■■■□□ 2
SNX13-206ENST00000474067 AEBP1Q8IUX7 1158 aa27.55■■■□□ 2
SNX13-206ENST00000474067 CABP4P57796 275 aa27.54■■■□□ 2
SNX13-206ENST00000474067 PNPLA7Q6ZV29 1317 aa27.54■■■□□ 2
SNX13-206ENST00000474067 AK7Q96M32 723 aa27.54■■■□□ 2
SNX13-206ENST00000474067 PDGFDQ9GZP0 370 aaPredicted RBP27.54■■■□□ 2
SNX13-206ENST00000474067 LOC102724428A0A0B4J2F2 783 aa27.53■■■□□ 2
SNX13-206ENST00000474067 SIK1P57059 783 aa27.53■■■□□ 2
SNX13-206ENST00000474067 CNGB1Q14028 1251 aaPredicted RBP27.53■■■□□ 2
SNX13-206ENST00000474067 AKAP4Q5JQC9 854 aa27.53■■■□□ 2
SNX13-206ENST00000474067 NUDCQ9Y266 331 aa27.53■■■□□ 2
SNX13-206ENST00000474067 PTGER2P43116 358 aa27.52■■■□□ 2
SNX13-206ENST00000474067 KCNQ4P56696 695 aa27.52■■■□□ 2
SNX13-206ENST00000474067 MSH5O43196 834 aa27.51■■□□□ 1.99
SNX13-206ENST00000474067 TAF1LQ8IZX4 1826 aa27.49■■□□□ 1.99
SNX13-206ENST00000474067 U2SURPO15042 1029 aaKnown RBP27.49■■□□□ 1.99
SNX13-206ENST00000474067 ARXQ96QS3 562 aa27.49■■□□□ 1.99
SNX13-206ENST00000474067 HMOX1P09601 288 aa27.48■■□□□ 1.99
SNX13-206ENST00000474067 ATP6V1AP38606 617 aa27.48■■□□□ 1.99
SNX13-206ENST00000474067 ATG3Q9NT62 314 aa27.48■■□□□ 1.99
SNX13-206ENST00000474067 ASAP1Q9ULH1 1129 aa27.48■■□□□ 1.99
SNX13-206ENST00000474067 C4BP0C0L5 1744 aa27.47■■□□□ 1.99
SNX13-206ENST00000474067 SGIP1Q9BQI5 828 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms