RNA–Protein interactions for RNA: ENST00000473391.1

REPIN1-207, Transcript of replication initiator 1, humanhuman

TSL 2

Gene REPIN1, Length 1,064 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-207ENST00000473391 ANKRD36BQ8N2N9 1353 aa28.42■■■□□ 2.14
REPIN1-207ENST00000473391 PRIM1P49642 420 aaKnown RBP28.41■■■□□ 2.14
REPIN1-207ENST00000473391 SLC16A10Q8TF71 515 aa28.41■■■□□ 2.14
REPIN1-207ENST00000473391 TONSLQ96HA7 1378 aa28.4■■■□□ 2.14
REPIN1-207ENST00000473391 COG3Q96JB2 828 aa28.39■■■□□ 2.14
REPIN1-207ENST00000473391 ST20-MTHFSA0A0A6YYL1 179 aa28.38■■■□□ 2.13
REPIN1-207ENST00000473391 SYTL4Q96C24 671 aaPredicted RBP28.37■■■□□ 2.13
REPIN1-207ENST00000473391 AMPHP49418 695 aa28.35■■■□□ 2.13
REPIN1-207ENST00000473391 ZCRB1Q8TBF4 217 aaKnown RBP28.35■■■□□ 2.13
REPIN1-207ENST00000473391 TFCP2L1Q9NZI6 479 aa28.35■■■□□ 2.13
REPIN1-207ENST00000473391 GPR162Q16538 588 aa28.33■■■□□ 2.13
REPIN1-207ENST00000473391 NBPF6Q5VWK0 638 aa28.33■■■□□ 2.13
REPIN1-207ENST00000473391 NBPF4Q96M43 638 aa28.33■■■□□ 2.13
REPIN1-207ENST00000473391 TAF1LQ8IZX4 1826 aa28.33■■■□□ 2.13
REPIN1-207ENST00000473391 POLD1P28340 1107 aa28.32■■■□□ 2.12
REPIN1-207ENST00000473391 KLHL34Q8N239 644 aa28.32■■■□□ 2.12
REPIN1-207ENST00000473391 RTL1A6NKG5 1358 aa28.32■■■□□ 2.12
REPIN1-207ENST00000473391 RRS1Q15050 365 aaKnown RBP28.31■■■□□ 2.12
REPIN1-207ENST00000473391 NLGN2Q8NFZ4 835 aa28.31■■■□□ 2.12
REPIN1-207ENST00000473391 C5P01031 1676 aa28.31■■■□□ 2.12
REPIN1-207ENST00000473391 KIF20BQ96Q89 1820 aa28.31■■■□□ 2.12
REPIN1-207ENST00000473391 USHBP1Q8N6Y0 703 aa28.29■■■□□ 2.12
REPIN1-207ENST00000473391 CCNL1Q9UK58 526 aaPredicted RBP28.29■■■□□ 2.12
REPIN1-207ENST00000473391 FYB1O15117 783 aa28.28■■■□□ 2.12
REPIN1-207ENST00000473391 C1QTNF8P60827 252 aa28.28■■■□□ 2.12
REPIN1-207ENST00000473391 ITGB4P16144 1822 aa28.27■■■□□ 2.12
REPIN1-207ENST00000473391 GGNBP2Q9H3C7 697 aa28.27■■■□□ 2.12
REPIN1-207ENST00000473391 TOGARAM1Q9Y4F4 1720 aa28.26■■■□□ 2.12
REPIN1-207ENST00000473391 COL23A1Q86Y22 540 aaPredicted RBP28.26■■■□□ 2.11
REPIN1-207ENST00000473391 USP47Q96K76 1375 aa28.24■■■□□ 2.11
REPIN1-207ENST00000473391 CGNL1Q0VF96 1302 aa28.23■■■□□ 2.11
REPIN1-207ENST00000473391 PELP1Q8IZL8 1130 aaKnown RBP28.23■■■□□ 2.11
REPIN1-207ENST00000473391 SENP3-EIF4A1A0A087X0R7 540 aa28.22■■■□□ 2.11
REPIN1-207ENST00000473391 SLC24A1O60721 1099 aa28.21■■■□□ 2.11
REPIN1-207ENST00000473391 YBX3P16989 372 aaKnown RBP eCLIP28.21■■■□□ 2.112e-12■□□□□ 8.9
REPIN1-207ENST00000473391 HSP90AB2PQ58FF8 381 aa28.21■■■□□ 2.11
REPIN1-207ENST00000473391 PKD1L3Q7Z443 1732 aa28.21■■■□□ 2.11
REPIN1-207ENST00000473391 RAPGEF4Q8WZA2 1011 aa28.2■■■□□ 2.1
REPIN1-207ENST00000473391 INSRP06213 1382 aa28.2■■■□□ 2.1
REPIN1-207ENST00000473391 SMG6Q86US8 1419 aaKnown RBP28.19■■■□□ 2.1
REPIN1-207ENST00000473391 CEP350Q5VT06 3117 aa28.17■■■□□ 2.1
REPIN1-207ENST00000473391 UBR3Q6ZT12 1888 aa28.17■■■□□ 2.1
REPIN1-207ENST00000473391 MSH5O43196 834 aa28.17■■■□□ 2.1
REPIN1-207ENST00000473391 TATP17735 454 aaPredicted RBP28.17■■■□□ 2.1
REPIN1-207ENST00000473391 MSL1Q68DK7 614 aa28.17■■■□□ 2.1
REPIN1-207ENST00000473391 C4BP0C0L5 1744 aa28.16■■■□□ 2.1
REPIN1-207ENST00000473391 MAP2P11137 1827 aaKnown RBP28.15■■■□□ 2.1
REPIN1-207ENST00000473391 FLT4P35916 1363 aa28.15■■■□□ 2.1
REPIN1-207ENST00000473391 CYP27B1O15528 508 aa28.15■■■□□ 2.1
REPIN1-207ENST00000473391 TMF1P82094 1093 aa28.15■■■□□ 2.1
REPIN1-207ENST00000473391 PCDH11XQ9BZA7 1347 aa28.15■■■□□ 2.1
REPIN1-207ENST00000473391 PCDH11YQ9BZA8 1340 aa28.15■■■□□ 2.1
REPIN1-207ENST00000473391 ANKRD26Q9UPS8 1709 aa28.15■■■□□ 2.1
REPIN1-207ENST00000473391 PALLDQ8WX93 1383 aa28.14■■■□□ 2.1
REPIN1-207ENST00000473391 KIF24Q5T7B8 1368 aa28.13■■■□□ 2.09
REPIN1-207ENST00000473391 NCAPD2Q15021 1401 aa28.12■■■□□ 2.09
REPIN1-207ENST00000473391 GIGYF1O75420 1035 aaPredicted RBP28.12■■■□□ 2.09
REPIN1-207ENST00000473391 AMIGO3Q86WK7 504 aa28.12■■■□□ 2.09
REPIN1-207ENST00000473391 MPRIPQ6WCQ1 1025 aa28.11■■■□□ 2.09
REPIN1-207ENST00000473391 CARD14Q9BXL6 1004 aa28.11■■■□□ 2.09
REPIN1-207ENST00000473391 GRIN3BO60391 1043 aa28.1■■■□□ 2.09
REPIN1-207ENST00000473391 EMILIN1Q9Y6C2 1016 aa28.09■■■□□ 2.09
REPIN1-207ENST00000473391 CD2APQ9Y5K6 639 aa28.07■■■□□ 2.08
REPIN1-207ENST00000473391 FLAD1Q8NFF5 587 aa28.06■■■□□ 2.08
REPIN1-207ENST00000473391 SMIM5Q71RC9 77 aa28.05■■■□□ 2.08
REPIN1-207ENST00000473391 NSD3Q9BZ95 1437 aa28.05■■■□□ 2.08
REPIN1-207ENST00000473391 PIGBQ92521 554 aa28.04■■■□□ 2.08
REPIN1-207ENST00000473391 ATP10DQ9P241 1426 aa28.03■■■□□ 2.08
REPIN1-207ENST00000473391 NKX1-1Q15270 411 aaPredicted RBP28.03■■■□□ 2.08
REPIN1-207ENST00000473391 SMARCC1Q92922 1105 aaPredicted RBP28.02■■■□□ 2.08
REPIN1-207ENST00000473391 CDCA8Q53HL2 280 aa28■■■□□ 2.07
REPIN1-207ENST00000473391 AK7Q96M32 723 aa27.99■■■□□ 2.07
REPIN1-207ENST00000473391 ADCY9O60503 1353 aa27.99■■■□□ 2.07
REPIN1-207ENST00000473391 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.98■■■□□ 2.07
REPIN1-207ENST00000473391 HMGB2P26583 209 aaKnown RBP27.98■■■□□ 2.07
REPIN1-207ENST00000473391 LINC00116Q8NCU8 138 aa27.98■■■□□ 2.07
REPIN1-207ENST00000473391 PHF14O94880 888 aa27.97■■■□□ 2.07
REPIN1-207ENST00000473391 WASHC2AQ641Q2 1341 aa27.96■■■□□ 2.07
REPIN1-207ENST00000473391 EYA1Q99502 592 aa27.96■■■□□ 2.07
REPIN1-207ENST00000473391 LOC102724428A0A0B4J2F2 783 aa27.95■■■□□ 2.06
REPIN1-207ENST00000473391 PPM1GO15355 546 aaPredicted RBP27.95■■■□□ 2.06
REPIN1-207ENST00000473391 SIK1P57059 783 aa27.95■■■□□ 2.06
REPIN1-207ENST00000473391 SPG7Q9UQ90 795 aa27.94■■■□□ 2.06
REPIN1-207ENST00000473391 KIAA1551Q9HCM1 1747 aa27.94■■■□□ 2.06
REPIN1-207ENST00000473391 KIF13BQ9NQT8 1826 aa27.94■■■□□ 2.06
REPIN1-207ENST00000473391 IGSF1Q8N6C5 1336 aa27.93■■■□□ 2.06
REPIN1-207ENST00000473391 ITPK1Q13572 414 aa27.93■■■□□ 2.06
REPIN1-207ENST00000473391 ASAP1Q9ULH1 1129 aa27.93■■■□□ 2.06
REPIN1-207ENST00000473391 SSFA2P28290 1259 aa27.92■■■□□ 2.06
REPIN1-207ENST00000473391 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.92■■■□□ 2.06
REPIN1-207ENST00000473391 POLKQ9UBT6 870 aa27.91■■■□□ 2.06
REPIN1-207ENST00000473391 WWC3Q9ULE0 1092 aa27.91■■■□□ 2.06
REPIN1-207ENST00000473391 TMOD3Q9NYL9 352 aa27.9■■■□□ 2.06
REPIN1-207ENST00000473391 PHKG2P15735 406 aa27.89■■■□□ 2.06
REPIN1-207ENST00000473391 N4BP2Q86UW6 1770 aaPredicted RBP27.88■■■□□ 2.05
REPIN1-207ENST00000473391 ZNF831Q5JPB2 1677 aa27.88■■■□□ 2.05
REPIN1-207ENST00000473391 COL5A3P25940 1745 aaPredicted RBP27.88■■■□□ 2.05
REPIN1-207ENST00000473391 CICQ96RK0 1608 aaPredicted RBP27.88■■■□□ 2.05
REPIN1-207ENST00000473391 GPBP1L1Q9HC44 474 aaPredicted RBP27.87■■■□□ 2.05
REPIN1-207ENST00000473391 ATG3Q9NT62 314 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms