RNA–Protein interactions for RNA: ENST00000473240.5

GCA-207, Transcript of grancalcin, humanhuman

TSL 3

Gene GCA, Length 814 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-207ENST00000473240 TMF1P82094 1093 aa9.01□□□□□ -0.97
GCA-207ENST00000473240 COL23A1Q86Y22 540 aaPredicted RBP9.01□□□□□ -0.97
GCA-207ENST00000473240 KLHL34Q8N239 644 aa9.01□□□□□ -0.97
GCA-207ENST00000473240 NSD2O96028 1365 aa9□□□□□ -0.97
GCA-207ENST00000473240 ANKRD36BQ8N2N9 1353 aa9□□□□□ -0.97
GCA-207ENST00000473240 UTRNP46939 3433 aa9□□□□□ -0.97
GCA-207ENST00000473240 SLC24A1O60721 1099 aa9□□□□□ -0.97
GCA-207ENST00000473240 GPR162Q16538 588 aa9□□□□□ -0.97
GCA-207ENST00000473240 SLC16A10Q8TF71 515 aa9□□□□□ -0.97
GCA-207ENST00000473240 CCNL1Q9UK58 526 aaPredicted RBP9□□□□□ -0.97
GCA-207ENST00000473240 BTAF1O14981 1849 aa9□□□□□ -0.97
GCA-207ENST00000473240 MEGF6O75095 1541 aa9□□□□□ -0.97
GCA-207ENST00000473240 MSH5O43196 834 aa8.99□□□□□ -0.97
GCA-207ENST00000473240 TRIM26Q12899 539 aaPredicted RBP8.99□□□□□ -0.97
GCA-207ENST00000473240 MPRIPQ6WCQ1 1025 aa8.99□□□□□ -0.97
GCA-207ENST00000473240 SMIM5Q71RC9 77 aa8.99□□□□□ -0.97
GCA-207ENST00000473240 NLGN2Q8NFZ4 835 aa8.99□□□□□ -0.97
GCA-207ENST00000473240 RAPGEF4Q8WZA2 1011 aa8.99□□□□□ -0.97
GCA-207ENST00000473240 CYP27B1O15528 508 aa8.98□□□□□ -0.97
GCA-207ENST00000473240 TATP17735 454 aaPredicted RBP8.98□□□□□ -0.97
GCA-207ENST00000473240 POLD1P28340 1107 aa8.98□□□□□ -0.97
GCA-207ENST00000473240 PELP1Q8IZL8 1130 aaKnown RBP8.98□□□□□ -0.97
GCA-207ENST00000473240 EMILIN1Q9Y6C2 1016 aa8.98□□□□□ -0.97
GCA-207ENST00000473240 RGPD2P0DJD1 1756 aa8.98□□□□□ -0.97
GCA-207ENST00000473240 PAPPAQ13219 1627 aa8.98□□□□□ -0.97
GCA-207ENST00000473240 USP47Q96K76 1375 aa8.98□□□□□ -0.97
GCA-207ENST00000473240 PPM1GO15355 546 aaPredicted RBP8.97□□□□□ -0.97
GCA-207ENST00000473240 MSL1Q68DK7 614 aa8.97□□□□□ -0.97
GCA-207ENST00000473240 AMIGO3Q86WK7 504 aa8.97□□□□□ -0.97
GCA-207ENST00000473240 INSRP06213 1382 aa8.97□□□□□ -0.97
GCA-207ENST00000473240 PIGBQ92521 554 aa8.96□□□□□ -0.98
GCA-207ENST00000473240 FAM208AQ9UK61 1670 aaKnown RBP8.96□□□□□ -0.98
GCA-207ENST00000473240 CGNL1Q0VF96 1302 aa8.96□□□□□ -0.98
GCA-207ENST00000473240 MAP3K5Q99683 1374 aa8.96□□□□□ -0.98
GCA-207ENST00000473240 YBX3P16989 372 aaKnown RBP eCLIP8.95□□□□□ -0.98
GCA-207ENST00000473240 CDCA8Q53HL2 280 aa8.95□□□□□ -0.98
GCA-207ENST00000473240 EYA1Q99502 592 aa8.95□□□□□ -0.98
GCA-207ENST00000473240 RTL1A6NKG5 1358 aa8.95□□□□□ -0.98
GCA-207ENST00000473240 TNNT2P45379 298 aaPredicted RBP8.94□□□□□ -0.98
GCA-207ENST00000473240 POLR3GLQ9BT43 218 aa8.94□□□□□ -0.98
GCA-207ENST00000473240 PCGF6Q9BYE7 350 aa8.94□□□□□ -0.98
GCA-207ENST00000473240 POLKQ9UBT6 870 aa8.94□□□□□ -0.98
GCA-207ENST00000473240 C1QTNF8P60827 252 aa8.93□□□□□ -0.98
GCA-207ENST00000473240 NKX1-1Q15270 411 aaPredicted RBP8.93□□□□□ -0.98
GCA-207ENST00000473240 WASHC2AQ641Q2 1341 aa8.93□□□□□ -0.98
GCA-207ENST00000473240 PCDH11XQ9BZA7 1347 aa8.93□□□□□ -0.98
GCA-207ENST00000473240 PCDH11YQ9BZA8 1340 aa8.93□□□□□ -0.98
GCA-207ENST00000473240 FLT4P35916 1363 aa8.93□□□□□ -0.98
GCA-207ENST00000473240 PALLDQ8WX93 1383 aa8.93□□□□□ -0.98
GCA-207ENST00000473240 SHANK3Q9BYB0 1731 aa8.93□□□□□ -0.98
GCA-207ENST00000473240 DOT1LQ8TEK3 1739 aa8.92□□□□□ -0.98
GCA-207ENST00000473240 SMG6Q86US8 1419 aaKnown RBP8.92□□□□□ -0.98
GCA-207ENST00000473240 NSD3Q9BZ95 1437 aa8.92□□□□□ -0.98
GCA-207ENST00000473240 PHF14O94880 888 aa8.92□□□□□ -0.98
GCA-207ENST00000473240 WWC3Q9ULE0 1092 aa8.92□□□□□ -0.98
GCA-207ENST00000473240 ASAP1Q9ULH1 1129 aa8.92□□□□□ -0.98
GCA-207ENST00000473240 LY75O60449 1722 aa8.91□□□□□ -0.98
GCA-207ENST00000473240 ITPK1Q13572 414 aa8.91□□□□□ -0.98
GCA-207ENST00000473240 LINC00116Q8NCU8 138 aa8.91□□□□□ -0.98
GCA-207ENST00000473240 SMARCC1Q92922 1105 aaPredicted RBP8.91□□□□□ -0.98
GCA-207ENST00000473240 SPG7Q9UQ90 795 aa8.91□□□□□ -0.98
GCA-207ENST00000473240 KIF24Q5T7B8 1368 aa8.9□□□□□ -0.98
GCA-207ENST00000473240 TUBGCP6Q96RT7 1819 aa8.9□□□□□ -0.98
GCA-207ENST00000473240 SENP3-EIF4A1A0A087X0R7 540 aa8.9□□□□□ -0.98
GCA-207ENST00000473240 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.9□□□□□ -0.98
GCA-207ENST00000473240 LOC102724428A0A0B4J2F2 783 aa8.9□□□□□ -0.98
GCA-207ENST00000473240 GRIN3BO60391 1043 aa8.9□□□□□ -0.98
GCA-207ENST00000473240 PHKG2P15735 406 aa8.9□□□□□ -0.98
GCA-207ENST00000473240 SIK1P57059 783 aa8.9□□□□□ -0.98
GCA-207ENST00000473240 EIF4A2Q14240 407 aaKnown RBP8.9□□□□□ -0.98
GCA-207ENST00000473240 FLAD1Q8NFF5 587 aa8.9□□□□□ -0.98
GCA-207ENST00000473240 AK7Q96M32 723 aa8.9□□□□□ -0.98
GCA-207ENST00000473240 PANK3Q9H999 370 aa8.9□□□□□ -0.98
GCA-207ENST00000473240 ATG3Q9NT62 314 aa8.9□□□□□ -0.98
GCA-207ENST00000473240 CD2APQ9Y5K6 639 aa8.9□□□□□ -0.98
GCA-207ENST00000473240 GOLGB1Q14789 3259 aaKnown RBP8.9□□□□□ -0.99
GCA-207ENST00000473240 ATP6V1AP38606 617 aa8.89□□□□□ -0.99
GCA-207ENST00000473240 IFNL2Q8IZJ0 200 aa8.89□□□□□ -0.99
GCA-207ENST00000473240 SLC4A9Q96Q91 983 aa8.89□□□□□ -0.99
GCA-207ENST00000473240 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.89□□□□□ -0.99
GCA-207ENST00000473240 TMOD3Q9NYL9 352 aa8.89□□□□□ -0.99
GCA-207ENST00000473240 TIMELESSQ9UNS1 1208 aa8.89□□□□□ -0.99
GCA-207ENST00000473240 COL24A1Q17RW2 1714 aa8.88□□□□□ -0.99
GCA-207ENST00000473240 CHD4Q14839 1912 aa8.88□□□□□ -0.99
GCA-207ENST00000473240 QSER1Q2KHR3 1735 aa8.88□□□□□ -0.99
GCA-207ENST00000473240 GNPATO15228 680 aa8.87□□□□□ -0.99
GCA-207ENST00000473240 GIGYF1O75420 1035 aaPredicted RBP8.87□□□□□ -0.99
GCA-207ENST00000473240 HSPA5P11021 654 aaKnown RBP8.87□□□□□ -0.99
GCA-207ENST00000473240 NCAPD2Q15021 1401 aa8.87□□□□□ -0.99
GCA-207ENST00000473240 HMGB2P26583 209 aaKnown RBP8.86□□□□□ -0.99
GCA-207ENST00000473240 AEBP1Q8IUX7 1158 aa8.86□□□□□ -0.99
GCA-207ENST00000473240 ZNF526Q8TF50 670 aaPredicted RBP8.86□□□□□ -0.99
GCA-207ENST00000473240 RBM42Q9BTD8 480 aaKnown RBP8.86□□□□□ -0.99
GCA-207ENST00000473240 TOGARAM1Q9Y4F4 1720 aa8.85□□□□□ -0.99
GCA-207ENST00000473240 MAP2P11137 1827 aaKnown RBP8.85□□□□□ -0.99
GCA-207ENST00000473240 ITGB4P16144 1822 aa8.85□□□□□ -0.99
GCA-207ENST00000473240 KIF20BQ96Q89 1820 aa8.85□□□□□ -0.99
GCA-207ENST00000473240 ERVV-2B6SEH9 535 aa8.85□□□□□ -0.99
GCA-207ENST00000473240 SSFA2P28290 1259 aa8.85□□□□□ -0.99
GCA-207ENST00000473240 EIF4G2P78344 907 aaKnown RBP eCLIP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms