RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-223ENST00000472807 SPON1Q9HCB6 807 aa12.36□□□□□ -0.43
CHEK2-223ENST00000472807 STK32BQ9NY57 414 aa12.36□□□□□ -0.43
CHEK2-223ENST00000472807 MEGF6O75095 1541 aa12.36□□□□□ -0.43
CHEK2-223ENST00000472807 CGNL1Q0VF96 1302 aa12.36□□□□□ -0.43
CHEK2-223ENST00000472807 CASZ1Q86V15 1759 aa12.35□□□□□ -0.43
CHEK2-223ENST00000472807 INSRP06213 1382 aa12.35□□□□□ -0.43
CHEK2-223ENST00000472807 EIF4G2P78344 907 aaKnown RBP eCLIP12.35□□□□□ -0.43
CHEK2-223ENST00000472807 POLR3GLQ9BT43 218 aa12.35□□□□□ -0.43
CHEK2-223ENST00000472807 CARD14Q9BXL6 1004 aa12.35□□□□□ -0.43
CHEK2-223ENST00000472807 PPP1R1BQ9UD71 204 aaPredicted RBP12.35□□□□□ -0.43
CHEK2-223ENST00000472807 SHANK3Q9BYB0 1731 aa12.34□□□□□ -0.43
CHEK2-223ENST00000472807 RAPGEF4Q8WZA2 1011 aa12.34□□□□□ -0.43
CHEK2-223ENST00000472807 DOT1LQ8TEK3 1739 aa12.34□□□□□ -0.43
CHEK2-223ENST00000472807 NBPF6Q5VWK0 638 aa12.33□□□□□ -0.44
CHEK2-223ENST00000472807 USHBP1Q8N6Y0 703 aa12.33□□□□□ -0.44
CHEK2-223ENST00000472807 ZCRB1Q8TBF4 217 aaKnown RBP12.33□□□□□ -0.44
CHEK2-223ENST00000472807 NBPF4Q96M43 638 aa12.33□□□□□ -0.44
CHEK2-223ENST00000472807 ANKRD26Q9UPS8 1709 aa12.33□□□□□ -0.44
CHEK2-223ENST00000472807 PAPPAQ13219 1627 aa12.33□□□□□ -0.44
CHEK2-223ENST00000472807 HSPA5P11021 654 aaKnown RBP12.32□□□□□ -0.44
CHEK2-223ENST00000472807 SLC15A2Q16348 729 aa12.32□□□□□ -0.44
CHEK2-223ENST00000472807 HSP90AB2PQ58FF8 381 aa12.32□□□□□ -0.44
CHEK2-223ENST00000472807 SYTL4Q96C24 671 aaPredicted RBP12.32□□□□□ -0.44
CHEK2-223ENST00000472807 EMILIN1Q9Y6C2 1016 aa12.32□□□□□ -0.44
CHEK2-223ENST00000472807 UTRNP46939 3433 aa12.31□□□□□ -0.44
CHEK2-223ENST00000472807 PPM1GO15355 546 aaPredicted RBP12.31□□□□□ -0.44
CHEK2-223ENST00000472807 TATP17735 454 aaPredicted RBP12.31□□□□□ -0.44
CHEK2-223ENST00000472807 ZBTB7AO95365 584 aa12.3□□□□□ -0.44
CHEK2-223ENST00000472807 PRIM1P49642 420 aaKnown RBP12.3□□□□□ -0.44
CHEK2-223ENST00000472807 SLC27A3Q5K4L6 730 aa12.3□□□□□ -0.44
CHEK2-223ENST00000472807 PCDH11XQ9BZA7 1347 aa12.3□□□□□ -0.44
CHEK2-223ENST00000472807 PCDH11YQ9BZA8 1340 aa12.3□□□□□ -0.44
CHEK2-223ENST00000472807 PDGFDQ9GZP0 370 aaPredicted RBP12.29□□□□□ -0.44
CHEK2-223ENST00000472807 MAP2P11137 1827 aaKnown RBP12.29□□□□□ -0.44
CHEK2-223ENST00000472807 WASHC2AQ641Q2 1341 aa12.28□□□□□ -0.44
CHEK2-223ENST00000472807 NSD2O96028 1365 aa12.28□□□□□ -0.44
CHEK2-223ENST00000472807 MTFR1LQ9H019 292 aa12.27□□□□□ -0.45
CHEK2-223ENST00000472807 LRRC4BQ9NT99 713 aa12.27□□□□□ -0.45
CHEK2-223ENST00000472807 LY75O60449 1722 aa12.27□□□□□ -0.45
CHEK2-223ENST00000472807 PKD1L3Q7Z443 1732 aa12.27□□□□□ -0.45
CHEK2-223ENST00000472807 NCAPD2Q15021 1401 aa12.27□□□□□ -0.45
CHEK2-223ENST00000472807 TNNT2P45379 298 aaPredicted RBP12.26□□□□□ -0.45
CHEK2-223ENST00000472807 ZNF827Q17R98 1081 aa12.26□□□□□ -0.45
CHEK2-223ENST00000472807 PANK3Q9H999 370 aa12.26□□□□□ -0.45
CHEK2-223ENST00000472807 ATF5Q9Y2D1 282 aaPredicted RBP12.26□□□□□ -0.45
CHEK2-223ENST00000472807 GOLGB1Q14789 3259 aaKnown RBP12.26□□□□□ -0.45
CHEK2-223ENST00000472807 QSER1Q2KHR3 1735 aa12.25□□□□□ -0.45
CHEK2-223ENST00000472807 PTGER2P43116 358 aa12.25□□□□□ -0.45
CHEK2-223ENST00000472807 POLKQ9UBT6 870 aa12.25□□□□□ -0.45
CHEK2-223ENST00000472807 NCBP3Q53F19 620 aaKnown RBP12.24□□□□□ -0.45
CHEK2-223ENST00000472807 AKT1S1Q96B36 256 aa12.24□□□□□ -0.45
CHEK2-223ENST00000472807 TFCP2L1Q9NZI6 479 aa12.24□□□□□ -0.45
CHEK2-223ENST00000472807 CCNL1Q9UK58 526 aaPredicted RBP12.24□□□□□ -0.45
CHEK2-223ENST00000472807 SPG7Q9UQ90 795 aa12.24□□□□□ -0.45
CHEK2-223ENST00000472807 TUBGCP6Q96RT7 1819 aa12.23□□□□□ -0.45
CHEK2-223ENST00000472807 CYP27B1O15528 508 aa12.23□□□□□ -0.45
CHEK2-223ENST00000472807 TOGARAM1Q9Y4F4 1720 aa12.23□□□□□ -0.45
CHEK2-223ENST00000472807 HMGB2P26583 209 aaKnown RBP12.22□□□□□ -0.45
CHEK2-223ENST00000472807 KCNQ4P56696 695 aa12.22□□□□□ -0.45
CHEK2-223ENST00000472807 EIF4A2Q14240 407 aaKnown RBP12.22□□□□□ -0.45
CHEK2-223ENST00000472807 EYA1Q99502 592 aa12.22□□□□□ -0.45
CHEK2-223ENST00000472807 KNSTRNQ9Y448 316 aa12.22□□□□□ -0.45
CHEK2-223ENST00000472807 PALLDQ8WX93 1383 aa12.21□□□□□ -0.45
CHEK2-223ENST00000472807 PLEKHG2Q9H7P9 1386 aa12.21□□□□□ -0.45
CHEK2-223ENST00000472807 ITGB4P16144 1822 aa12.21□□□□□ -0.45
CHEK2-223ENST00000472807 PNPLA7Q6ZV29 1317 aa12.21□□□□□ -0.45
CHEK2-223ENST00000472807 MPRIPQ6WCQ1 1025 aa12.21□□□□□ -0.45
CHEK2-223ENST00000472807 MORC1Q86VD1 984 aa12.21□□□□□ -0.45
CHEK2-223ENST00000472807 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.21□□□□□ -0.45
CHEK2-223ENST00000472807 C5P01031 1676 aa12.21□□□□□ -0.45
CHEK2-223ENST00000472807 SLC16A10Q8TF71 515 aa12.2□□□□□ -0.46
CHEK2-223ENST00000472807 SMARCC1Q92922 1105 aaPredicted RBP12.2□□□□□ -0.46
CHEK2-223ENST00000472807 ARXQ96QS3 562 aa12.2□□□□□ -0.46
CHEK2-223ENST00000472807 SGIP1Q9BQI5 828 aa12.2□□□□□ -0.46
CHEK2-223ENST00000472807 FHDC1Q9C0D6 1143 aaPredicted RBP12.2□□□□□ -0.46
CHEK2-223ENST00000472807 KIF7Q2M1P5 1343 aa12.19□□□□□ -0.46
CHEK2-223ENST00000472807 IGSF1Q8N6C5 1336 aa12.19□□□□□ -0.46
CHEK2-223ENST00000472807 POLD1P28340 1107 aa12.19□□□□□ -0.46
CHEK2-223ENST00000472807 NKX1-1Q15270 411 aaPredicted RBP12.19□□□□□ -0.46
CHEK2-223ENST00000472807 MAP3K5Q99683 1374 aa12.18□□□□□ -0.46
CHEK2-223ENST00000472807 IFNL2Q8IZJ0 200 aa12.18□□□□□ -0.46
CHEK2-223ENST00000472807 TAF1LQ8IZX4 1826 aa12.18□□□□□ -0.46
CHEK2-223ENST00000472807 COL24A1Q17RW2 1714 aa12.17□□□□□ -0.46
CHEK2-223ENST00000472807 PHKG2P15735 406 aa12.17□□□□□ -0.46
CHEK2-223ENST00000472807 YY1P25490 414 aa12.17□□□□□ -0.46
CHEK2-223ENST00000472807 PIGBQ92521 554 aa12.17□□□□□ -0.46
CHEK2-223ENST00000472807 SYT17Q9BSW7 474 aa12.17□□□□□ -0.46
CHEK2-223ENST00000472807 TMOD3Q9NYL9 352 aa12.17□□□□□ -0.46
CHEK2-223ENST00000472807 AK7Q96M32 723 aa12.16□□□□□ -0.46
CHEK2-223ENST00000472807 C4BP0C0L5 1744 aa12.16□□□□□ -0.46
CHEK2-223ENST00000472807 HSP90AB1P08238 724 aaKnown RBP12.15□□□□□ -0.46
CHEK2-223ENST00000472807 AMER1Q5JTC6 1135 aaPredicted RBP12.15□□□□□ -0.46
CHEK2-223ENST00000472807 FLAD1Q8NFF5 587 aa12.15□□□□□ -0.46
CHEK2-223ENST00000472807 PLEKHO1Q53GL0 409 aaPredicted RBP12.14□□□□□ -0.47
CHEK2-223ENST00000472807 KLHL34Q8N239 644 aa12.14□□□□□ -0.47
CHEK2-223ENST00000472807 LOC102724428A0A0B4J2F2 783 aa12.13□□□□□ -0.47
CHEK2-223ENST00000472807 SIK1P57059 783 aa12.13□□□□□ -0.47
CHEK2-223ENST00000472807 AMOTQ4VCS5 1084 aa12.13□□□□□ -0.47
CHEK2-223ENST00000472807 ZNF530Q6P9A1 599 aaPredicted RBP12.13□□□□□ -0.47
CHEK2-223ENST00000472807 COL23A1Q86Y22 540 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms