RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 USP17L8P0C7I0 530 aa11.89□□□□□ -0.51
SCAF4-205ENST00000472318 RFC5P40937 340 aa11.89□□□□□ -0.51
SCAF4-205ENST00000472318 BRPF1P55201 1214 aaPredicted RBP11.89□□□□□ -0.51
SCAF4-205ENST00000472318 ERFEQ4G0M1 354 aa11.89□□□□□ -0.51
SCAF4-205ENST00000472318 CUL7Q14999 1698 aa11.88□□□□□ -0.51
SCAF4-205ENST00000472318 NFX1Q12986 1120 aaKnown RBP11.88□□□□□ -0.51
SCAF4-205ENST00000472318 CARD14Q9BXL6 1004 aa11.88□□□□□ -0.51
SCAF4-205ENST00000472318 ADAMTSL3P82987 1691 aa11.87□□□□□ -0.51
SCAF4-205ENST00000472318 UACAQ9BZF9 1416 aa11.87□□□□□ -0.51
SCAF4-205ENST00000472318 FSHRP23945 695 aa11.87□□□□□ -0.51
SCAF4-205ENST00000472318 MRPL14Q6P1L8 145 aaKnown RBP11.87□□□□□ -0.51
SCAF4-205ENST00000472318 ITPKCQ96DU7 683 aa11.87□□□□□ -0.51
SCAF4-205ENST00000472318 HMX1Q9NP08 348 aaPredicted RBP11.87□□□□□ -0.51
SCAF4-205ENST00000472318 ZIC2O95409 532 aaPredicted RBP11.86□□□□□ -0.51
SCAF4-205ENST00000472318 VASH1Q7L8A9 365 aaPredicted RBP11.86□□□□□ -0.51
SCAF4-205ENST00000472318 PCMTD1Q96MG8 357 aaPredicted RBP11.86□□□□□ -0.51
SCAF4-205ENST00000472318 ZFP42Q96MM3 310 aa11.86□□□□□ -0.51
SCAF4-205ENST00000472318 ARHGAP9Q9BRR9 750 aa11.86□□□□□ -0.51
SCAF4-205ENST00000472318 ZFAND3Q9H8U3 227 aa11.86□□□□□ -0.51
SCAF4-205ENST00000472318 KDM5BQ9UGL1 1544 aa11.86□□□□□ -0.51
SCAF4-205ENST00000472318 WFS1O76024 890 aa11.85□□□□□ -0.51
SCAF4-205ENST00000472318 IL27Q8NEV9 243 aa11.84□□□□□ -0.51
SCAF4-205ENST00000472318 EPS8L1Q8TE68 723 aa11.84□□□□□ -0.51
SCAF4-205ENST00000472318 OCSTAMPQ9BR26 566 aa11.84□□□□□ -0.51
SCAF4-205ENST00000472318 GPSM3Q9Y4H4 160 aa11.84□□□□□ -0.51
SCAF4-205ENST00000472318 MAGI3Q5TCQ9 1506 aa11.84□□□□□ -0.51
SCAF4-205ENST00000472318 CD109Q6YHK3 1445 aa11.83□□□□□ -0.52
SCAF4-205ENST00000472318 TERTO14746 1132 aaKnown RBP11.82□□□□□ -0.52
SCAF4-205ENST00000472318 CARMIL2Q6F5E8 1435 aa11.81□□□□□ -0.52
SCAF4-205ENST00000472318 SCARF1Q14162 830 aa11.81□□□□□ -0.52
SCAF4-205ENST00000472318 ERICH6Q7L0X2 663 aa11.81□□□□□ -0.52
SCAF4-205ENST00000472318 CCDC116Q8IYX3 515 aa11.81□□□□□ -0.52
SCAF4-205ENST00000472318 MEIOBQ8N635 442 aa11.81□□□□□ -0.52
SCAF4-205ENST00000472318 SLC10A4Q96EP9 437 aa11.81□□□□□ -0.52
SCAF4-205ENST00000472318 PURBQ96QR8 312 aaKnown RBP11.81□□□□□ -0.52
SCAF4-205ENST00000472318 CDV3Q9UKY7 258 aaKnown RBP11.81□□□□□ -0.52
SCAF4-205ENST00000472318 BIVM-ERCC5R4GMW8 1640 aa11.81□□□□□ -0.52
SCAF4-205ENST00000472318 MADDQ8WXG6 1647 aa11.8□□□□□ -0.52
SCAF4-205ENST00000472318 PTK2Q05397 1052 aa11.8□□□□□ -0.52
SCAF4-205ENST00000472318 WDR7Q9Y4E6 1490 aa11.8□□□□□ -0.52
SCAF4-205ENST00000472318 TMEM259Q4ZIN3 620 aa11.79□□□□□ -0.52
SCAF4-205ENST00000472318 LCE2CQ5TA81 110 aa11.79□□□□□ -0.52
SCAF4-205ENST00000472318 ZBTB33Q86T24 672 aa11.79□□□□□ -0.52
SCAF4-205ENST00000472318 PNMA1Q8ND90 353 aa11.79□□□□□ -0.52
SCAF4-205ENST00000472318 TRIM34Q9BYJ4 488 aa11.79□□□□□ -0.52
SCAF4-205ENST00000472318 EMILIN1Q9Y6C2 1016 aa11.79□□□□□ -0.52
SCAF4-205ENST00000472318 IGF1RP08069 1367 aa11.79□□□□□ -0.52
SCAF4-205ENST00000472318 ZCCHC11Q5TAX3 1644 aaKnown RBP11.78□□□□□ -0.52
SCAF4-205ENST00000472318 ADAM32Q8TC27 787 aa11.77□□□□□ -0.53
SCAF4-205ENST00000472318 NXF1Q9UBU9 619 aaKnown RBP11.77□□□□□ -0.53
SCAF4-205ENST00000472318 ARID4BQ4LE39 1312 aaPredicted RBP11.77□□□□□ -0.53
SCAF4-205ENST00000472318 LINC00528Q8N1L1 170 aa11.76□□□□□ -0.53
SCAF4-205ENST00000472318 KCTD15Q96SI1 283 aaPredicted RBP11.76□□□□□ -0.53
SCAF4-205ENST00000472318 ARAP3Q8WWN8 1544 aa11.76□□□□□ -0.53
SCAF4-205ENST00000472318 RAPGEF3O95398 923 aa11.75□□□□□ -0.53
SCAF4-205ENST00000472318 NPAS3Q8IXF0 933 aa11.75□□□□□ -0.53
SCAF4-205ENST00000472318 DISP1Q96F81 1524 aa11.75□□□□□ -0.53
SCAF4-205ENST00000472318 BCORL1Q5H9F3 1711 aa11.74□□□□□ -0.53
SCAF4-205ENST00000472318 WIPF1O43516 503 aa11.74□□□□□ -0.53
SCAF4-205ENST00000472318 PPP1R26Q5T8A7 1209 aaPredicted RBP11.74□□□□□ -0.53
SCAF4-205ENST00000472318 HOMEZQ8IX15 550 aa11.74□□□□□ -0.53
SCAF4-205ENST00000472318 C6orf118Q5T5N4 469 aa11.73□□□□□ -0.53
SCAF4-205ENST00000472318 GJD4Q96KN9 370 aaPredicted RBP11.73□□□□□ -0.53
SCAF4-205ENST00000472318 UPP2O95045 317 aa11.72□□□□□ -0.53
SCAF4-205ENST00000472318 NBPF20Q3BBV1 942 aa11.72□□□□□ -0.53
SCAF4-205ENST00000472318 INTS6LQ5JSJ4 861 aaKnown RBP11.72□□□□□ -0.53
SCAF4-205ENST00000472318 PGPEP1Q9NXJ5 209 aa11.72□□□□□ -0.53
SCAF4-205ENST00000472318 DHX9Q08211 1270 aaKnown RBP11.71□□□□□ -0.53
SCAF4-205ENST00000472318 GTF3C3Q9Y5Q9 886 aa11.71□□□□□ -0.53
SCAF4-205ENST00000472318 BMP2P12643 396 aa11.7□□□□□ -0.54
SCAF4-205ENST00000472318 Q6ZVU0 165 aa11.7□□□□□ -0.54
SCAF4-205ENST00000472318 TSEN34Q9BSV6 310 aaKnown RBP11.7□□□□□ -0.54
SCAF4-205ENST00000472318 RIMS1Q86UR5 1692 aaKnown RBP11.7□□□□□ -0.54
SCAF4-205ENST00000472318 CFAP43Q8NDM7 1665 aa11.7□□□□□ -0.54
SCAF4-205ENST00000472318 SOBPA7XYQ1 873 aa11.69□□□□□ -0.54
SCAF4-205ENST00000472318 H3BM21 787 aa11.69□□□□□ -0.54
SCAF4-205ENST00000472318 SLC16A10Q8TF71 515 aa11.69□□□□□ -0.54
SCAF4-205ENST00000472318 SOS2Q07890 1332 aaPredicted RBP11.68□□□□□ -0.54
SCAF4-205ENST00000472318 CBLBQ13191 982 aa11.67□□□□□ -0.54
SCAF4-205ENST00000472318 BANK1Q8NDB2 785 aa11.67□□□□□ -0.54
SCAF4-205ENST00000472318 YEATS2Q9ULM3 1422 aa11.67□□□□□ -0.54
SCAF4-205ENST00000472318 IQGAP2Q13576 1575 aa11.67□□□□□ -0.54
SCAF4-205ENST00000472318 MAN1A2O60476 641 aa11.66□□□□□ -0.54
SCAF4-205ENST00000472318 DZIP3Q86Y13 1208 aaKnown RBP11.66□□□□□ -0.54
SCAF4-205ENST00000472318 ESPNB1AK53 854 aa11.65□□□□□ -0.54
SCAF4-205ENST00000472318 VEGFBP49765 207 aa11.65□□□□□ -0.54
SCAF4-205ENST00000472318 IRF7Q92985 503 aa11.65□□□□□ -0.54
SCAF4-205ENST00000472318 DNMT3LQ9UJW3 386 aa11.65□□□□□ -0.54
SCAF4-205ENST00000472318 CARMIL1Q5VZK9 1371 aa11.65□□□□□ -0.55
SCAF4-205ENST00000472318 ZBBXA8MT70 800 aa11.64□□□□□ -0.55
SCAF4-205ENST00000472318 SPINT1O43278 529 aa11.63□□□□□ -0.55
SCAF4-205ENST00000472318 GPR37L1O60883 481 aa11.63□□□□□ -0.55
SCAF4-205ENST00000472318 MTMR14Q8NCE2 650 aa11.63□□□□□ -0.55
SCAF4-205ENST00000472318 FRMPD1Q5SYB0 1578 aa11.62□□□□□ -0.55
SCAF4-205ENST00000472318 FBXO45P0C2W1 286 aa11.62□□□□□ -0.55
SCAF4-205ENST00000472318 SEPT12Q8IYM1 358 aa11.62□□□□□ -0.55
SCAF4-205ENST00000472318 ZNF784Q8NCA9 323 aaPredicted RBP11.62□□□□□ -0.55
SCAF4-205ENST00000472318 PHLDB1Q86UU1 1377 aa11.62□□□□□ -0.55
SCAF4-205ENST00000472318 ERBB4Q15303 1308 aa11.61□□□□□ -0.55
SCAF4-205ENST00000472318 KIF27Q86VH2 1401 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms