RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 RAPGEF4Q8WZA2 1011 aa18.78■□□□□ 0.6
SSR4-207ENST00000471724 TATP17735 454 aaPredicted RBP18.75■□□□□ 0.59
SSR4-207ENST00000471724 U2AF1L5P0DN76 240 aaPredicted RBP18.74■□□□□ 0.59
SSR4-207ENST00000471724 U2AF1Q01081 240 aaKnown RBP eCLIP18.74■□□□□ 0.59
SSR4-207ENST00000471724 WDR43Q15061 677 aaKnown RBP eCLIP18.74■□□□□ 0.59
SSR4-207ENST00000471724 SULT6B1Q6IMI4 303 aa18.74■□□□□ 0.59
SSR4-207ENST00000471724 MRS2Q9HD23 443 aa18.74■□□□□ 0.59
SSR4-207ENST00000471724 SF3B2Q13435 895 aaKnown RBP18.72■□□□□ 0.59
SSR4-207ENST00000471724 DDB1Q16531 1140 aa18.72■□□□□ 0.59
SSR4-207ENST00000471724 AEBP1Q8IUX7 1158 aa18.72■□□□□ 0.59
SSR4-207ENST00000471724 VIRMAQ69YN4 1812 aaKnown RBP18.72■□□□□ 0.59
SSR4-207ENST00000471724 CCER2I3L3R5 266 aa18.71■□□□□ 0.59
SSR4-207ENST00000471724 HMOX1P09601 288 aa18.71■□□□□ 0.59
SSR4-207ENST00000471724 PDE3BQ13370 1112 aa18.71■□□□□ 0.59
SSR4-207ENST00000471724 PNNQ9H307 717 aaKnown RBP18.7■□□□□ 0.58
SSR4-207ENST00000471724 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.7■□□□□ 0.58
SSR4-207ENST00000471724 PCDH11XQ9BZA7 1347 aa18.7■□□□□ 0.58
SSR4-207ENST00000471724 PCDH11YQ9BZA8 1340 aa18.7■□□□□ 0.58
SSR4-207ENST00000471724 FCHSD2O94868 740 aa18.69■□□□□ 0.58
SSR4-207ENST00000471724 RSPH6AQ9H0K4 717 aa18.69■□□□□ 0.58
SSR4-207ENST00000471724 SPG7Q9UQ90 795 aa18.69■□□□□ 0.58
SSR4-207ENST00000471724 DOT1LQ8TEK3 1739 aa18.69■□□□□ 0.58
SSR4-207ENST00000471724 EXOC5O00471 708 aa18.68■□□□□ 0.58
SSR4-207ENST00000471724 NEFMP07197 916 aa18.68■□□□□ 0.58
SSR4-207ENST00000471724 AMOTQ4VCS5 1084 aa18.68■□□□□ 0.58
SSR4-207ENST00000471724 DLG5Q8TDM6 1919 aa18.68■□□□□ 0.58
SSR4-207ENST00000471724 SBF2Q86WG5 1849 aa18.67■□□□□ 0.58
SSR4-207ENST00000471724 PRKAR2BP31323 418 aa18.67■□□□□ 0.58
SSR4-207ENST00000471724 CCDC184Q52MB2 194 aa18.67■□□□□ 0.58
SSR4-207ENST00000471724 FAM196AQ6ZSG2 479 aa18.67■□□□□ 0.58
SSR4-207ENST00000471724 ZCRB1Q8TBF4 217 aaKnown RBP18.67■□□□□ 0.58
SSR4-207ENST00000471724 PLEKHO1Q53GL0 409 aaPredicted RBP18.66■□□□□ 0.58
SSR4-207ENST00000471724 SCN11AQ9UI33 1791 aa18.65■□□□□ 0.58
SSR4-207ENST00000471724 MIER1Q8N108 512 aa18.65■□□□□ 0.58
SSR4-207ENST00000471724 NHSQ6T4R5 1651 aa18.65■□□□□ 0.58
SSR4-207ENST00000471724 MAPK8IP3Q9UPT6 1336 aa18.65■□□□□ 0.58
SSR4-207ENST00000471724 TOGARAM1Q9Y4F4 1720 aa18.64■□□□□ 0.57
SSR4-207ENST00000471724 BCL9O00512 1426 aa18.64■□□□□ 0.57
SSR4-207ENST00000471724 ADAMTS7Q9UKP4 1686 aa18.63■□□□□ 0.57
SSR4-207ENST00000471724 BAG6P46379 1132 aa18.63■□□□□ 0.57
SSR4-207ENST00000471724 GAS2L2Q8NHY3 880 aa18.63■□□□□ 0.57
SSR4-207ENST00000471724 PNISRQ8TF01 805 aaKnown RBP18.63■□□□□ 0.57
SSR4-207ENST00000471724 C1orf141Q5JVX7 400 aa18.62■□□□□ 0.57
SSR4-207ENST00000471724 ZNF530Q6P9A1 599 aaPredicted RBP18.62■□□□□ 0.57
SSR4-207ENST00000471724 ITGB4P16144 1822 aa18.62■□□□□ 0.57
SSR4-207ENST00000471724 EP400Q96L91 3159 aa18.61■□□□□ 0.57
SSR4-207ENST00000471724 KAT6BQ8WYB5 2073 aa18.61■□□□□ 0.57
SSR4-207ENST00000471724 FAM182BQ5T319 152 aa18.61■□□□□ 0.57
SSR4-207ENST00000471724 ADAMTS8Q9UP79 889 aa18.61■□□□□ 0.57
SSR4-207ENST00000471724 IFNL2Q8IZJ0 200 aa18.6■□□□□ 0.57
SSR4-207ENST00000471724 DDX54Q8TDD1 881 aaKnown RBP18.6■□□□□ 0.57
SSR4-207ENST00000471724 TNS1Q9HBL0 1735 aaKnown RBP18.6■□□□□ 0.57
SSR4-207ENST00000471724 MAP3K5Q99683 1374 aa18.59■□□□□ 0.57
SSR4-207ENST00000471724 HSP90AB1P08238 724 aaKnown RBP18.59■□□□□ 0.57
SSR4-207ENST00000471724 MARCH10Q8NA82 808 aaPredicted RBP18.59■□□□□ 0.57
SSR4-207ENST00000471724 RUNDC1Q96C34 613 aa18.59■□□□□ 0.57
SSR4-207ENST00000471724 PLEKHF1Q96S99 279 aa18.59■□□□□ 0.57
SSR4-207ENST00000471724 CYP27B1O15528 508 aa18.58■□□□□ 0.56
SSR4-207ENST00000471724 PHKG2P15735 406 aa18.58■□□□□ 0.56
SSR4-207ENST00000471724 MTHFSDQ2M296 383 aaKnown RBP18.57■□□□□ 0.56
SSR4-207ENST00000471724 AKAP4Q5JQC9 854 aa18.57■□□□□ 0.56
SSR4-207ENST00000471724 PHACTR3Q96KR7 559 aa18.57■□□□□ 0.56
SSR4-207ENST00000471724 BTAF1O14981 1849 aa18.57■□□□□ 0.56
SSR4-207ENST00000471724 MRC1P22897 1456 aa18.57■□□□□ 0.56
SSR4-207ENST00000471724 RGPD3A6NKT7 1758 aaPredicted RBP18.56■□□□□ 0.56
SSR4-207ENST00000471724 SIPA1L3O60292 1781 aaPredicted RBP18.56■□□□□ 0.56
SSR4-207ENST00000471724 RGPD4Q7Z3J3 1758 aa18.56■□□□□ 0.56
SSR4-207ENST00000471724 TRIM37O94972 964 aa18.56■□□□□ 0.56
SSR4-207ENST00000471724 DEFB132Q7Z7B7 95 aa18.56■□□□□ 0.56
SSR4-207ENST00000471724 FAM9BQ8IZU0 186 aa18.56■□□□□ 0.56
SSR4-207ENST00000471724 NKX1-1Q15270 411 aaPredicted RBP18.55■□□□□ 0.56
SSR4-207ENST00000471724 NFE2L2Q16236 605 aa18.55■□□□□ 0.56
SSR4-207ENST00000471724 CCDC146Q8IYE0 955 aa18.55■□□□□ 0.56
SSR4-207ENST00000471724 KDM6AO15550 1401 aaPredicted RBP18.55■□□□□ 0.56
SSR4-207ENST00000471724 GNAT3A8MTJ3 354 aa18.54■□□□□ 0.56
SSR4-207ENST00000471724 DCAF5Q96JK2 942 aa18.54■□□□□ 0.56
SSR4-207ENST00000471724 APBA3O96018 575 aa18.52■□□□□ 0.56
SSR4-207ENST00000471724 LMOD3Q0VAK6 560 aa18.52■□□□□ 0.56
SSR4-207ENST00000471724 PAPPAQ13219 1627 aa18.52■□□□□ 0.55
SSR4-207ENST00000471724 HTATSF1O43719 755 aaKnown RBP18.51■□□□□ 0.55
SSR4-207ENST00000471724 RTF1Q92541 710 aaKnown RBP18.51■□□□□ 0.55
SSR4-207ENST00000471724 TMPOP42166 694 aaKnown RBP18.5■□□□□ 0.55
SSR4-207ENST00000471724 EN1Q05925 392 aaPredicted RBP18.5■□□□□ 0.55
SSR4-207ENST00000471724 CEMIPQ8WUJ3 1361 aa18.49■□□□□ 0.55
SSR4-207ENST00000471724 ERVV-2B6SEH9 535 aa18.48■□□□□ 0.55
SSR4-207ENST00000471724 MPRIPQ6WCQ1 1025 aa18.48■□□□□ 0.55
SSR4-207ENST00000471724 BCL11BQ9C0K0 894 aaPredicted RBP18.48■□□□□ 0.55
SSR4-207ENST00000471724 LY75O60449 1722 aa18.47■□□□□ 0.55
SSR4-207ENST00000471724 APAF1O14727 1248 aa18.47■□□□□ 0.55
SSR4-207ENST00000471724 RNMTO43148 476 aaKnown RBP18.47■□□□□ 0.55
SSR4-207ENST00000471724 RIPK4P57078 832 aa18.47■□□□□ 0.55
SSR4-207ENST00000471724 NGEFQ8N5V2 710 aa18.47■□□□□ 0.55
SSR4-207ENST00000471724 ACSBG1Q96GR2 724 aa18.47■□□□□ 0.55
SSR4-207ENST00000471724 UBR2Q8IWV8 1755 aa18.47■□□□□ 0.55
SSR4-207ENST00000471724 KDM3BQ7LBC6 1761 aa18.46■□□□□ 0.55
SSR4-207ENST00000471724 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
SSR4-207ENST00000471724 SYTL4Q96C24 671 aaPredicted RBP18.46■□□□□ 0.55
SSR4-207ENST00000471724 CAMKK2Q96RR4 588 aa18.46■□□□□ 0.55
SSR4-207ENST00000471724 TMOD3Q9NYL9 352 aa18.46■□□□□ 0.55
SSR4-207ENST00000471724 TEFQ10587 303 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms