RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 FAM208AQ9UK61 1670 aaKnown RBP17.04■□□□□ 0.32
LINC00888-202ENST00000471496 HOXC9P31274 260 aa17.03■□□□□ 0.32
LINC00888-202ENST00000471496 THRAP3Q9Y2W1 955 aaKnown RBP17.03■□□□□ 0.32
LINC00888-202ENST00000471496 RTL1A6NKG5 1358 aa17.02■□□□□ 0.32
LINC00888-202ENST00000471496 AMER1Q5JTC6 1135 aaPredicted RBP17.02■□□□□ 0.32
LINC00888-202ENST00000471496 TOM1L2Q6ZVM7 507 aa17.02■□□□□ 0.32
LINC00888-202ENST00000471496 UPF1Q92900 1129 aaKnown RBP eCLIP17.02■□□□□ 0.327e-7■■■■□ 25.3
LINC00888-202ENST00000471496 NSD2O96028 1365 aa17.02■□□□□ 0.31
LINC00888-202ENST00000471496 ANKRD24Q8TF21 1146 aa17.01■□□□□ 0.31
LINC00888-202ENST00000471496 CARD10Q9BWT7 1032 aa17.01■□□□□ 0.31
LINC00888-202ENST00000471496 TSPYL2Q9H2G4 693 aaPredicted RBP17.01■□□□□ 0.31
LINC00888-202ENST00000471496 LRRC37A3O60309 1634 aa17.01■□□□□ 0.31
LINC00888-202ENST00000471496 DISP2A7MBM2 1401 aa17■□□□□ 0.31
LINC00888-202ENST00000471496 AMPHP49418 695 aa16.99■□□□□ 0.31
LINC00888-202ENST00000471496 KRT27Q7Z3Y8 459 aa16.99■□□□□ 0.31
LINC00888-202ENST00000471496 PHF12Q96QT6 1004 aa16.99■□□□□ 0.31
LINC00888-202ENST00000471496 KNSTRNQ9Y448 316 aa16.99■□□□□ 0.31
LINC00888-202ENST00000471496 EMILIN1Q9Y6C2 1016 aa16.99■□□□□ 0.31
LINC00888-202ENST00000471496 KIF24Q5T7B8 1368 aa16.99■□□□□ 0.31
LINC00888-202ENST00000471496 A0A0G2JS52 829 aa16.99■□□□□ 0.31
LINC00888-202ENST00000471496 CSB-PGBD3P0DP91 1061 aa16.99■□□□□ 0.31
LINC00888-202ENST00000471496 MYT1Q01538 1121 aa16.99■□□□□ 0.31
LINC00888-202ENST00000471496 POLKQ9UBT6 870 aa16.98■□□□□ 0.31
LINC00888-202ENST00000471496 INSRP06213 1382 aa16.98■□□□□ 0.31
LINC00888-202ENST00000471496 FLT4P35916 1363 aa16.98■□□□□ 0.31
LINC00888-202ENST00000471496 HSP90AB2PQ58FF8 381 aa16.97■□□□□ 0.31
LINC00888-202ENST00000471496 DCBLD2Q96PD2 775 aa16.97■□□□□ 0.31
LINC00888-202ENST00000471496 FAM182BQ5T319 152 aa16.96■□□□□ 0.31
LINC00888-202ENST00000471496 LTV1Q96GA3 475 aaPredicted RBP16.96■□□□□ 0.31
LINC00888-202ENST00000471496 NLRP2Q9NX02 1062 aa16.96■□□□□ 0.31
LINC00888-202ENST00000471496 SMG6Q86US8 1419 aaKnown RBP16.95■□□□□ 0.3
LINC00888-202ENST00000471496 ZEB1P37275 1124 aaPredicted RBP16.95■□□□□ 0.3
LINC00888-202ENST00000471496 TNNT2P45379 298 aaPredicted RBP16.95■□□□□ 0.3
LINC00888-202ENST00000471496 NPC1L1Q9UHC9 1359 aa16.94■□□□□ 0.3
LINC00888-202ENST00000471496 VASPP50552 380 aaPredicted RBP16.94■□□□□ 0.3
LINC00888-202ENST00000471496 MORC1Q86VD1 984 aa16.93■□□□□ 0.3
LINC00888-202ENST00000471496 SBF2Q86WG5 1849 aa16.93■□□□□ 0.3
LINC00888-202ENST00000471496 GALR2O43603 387 aaPredicted RBP16.93■□□□□ 0.3
LINC00888-202ENST00000471496 NBPF6Q5VWK0 638 aa16.93■□□□□ 0.3
LINC00888-202ENST00000471496 RASEFQ8IZ41 740 aa16.93■□□□□ 0.3
LINC00888-202ENST00000471496 NBPF4Q96M43 638 aa16.93■□□□□ 0.3
LINC00888-202ENST00000471496 TNS1Q9HBL0 1735 aaKnown RBP16.92■□□□□ 0.3
LINC00888-202ENST00000471496 CDCA7Q9BWT1 371 aaPredicted RBP16.92■□□□□ 0.3
LINC00888-202ENST00000471496 SHANK3Q9BYB0 1731 aa16.91■□□□□ 0.3
LINC00888-202ENST00000471496 PPM1GO15355 546 aaPredicted RBP16.91■□□□□ 0.3
LINC00888-202ENST00000471496 NCAPD2Q15021 1401 aa16.91■□□□□ 0.3
LINC00888-202ENST00000471496 RGPD1P0DJD0 1748 aa16.9■□□□□ 0.3
LINC00888-202ENST00000471496 NUBP1P53384 320 aa16.9■□□□□ 0.3
LINC00888-202ENST00000471496 PDE3BQ13370 1112 aa16.9■□□□□ 0.3
LINC00888-202ENST00000471496 DDB1Q16531 1140 aa16.9■□□□□ 0.3
LINC00888-202ENST00000471496 CC2D1BQ5T0F9 858 aaKnown RBP16.9■□□□□ 0.3
LINC00888-202ENST00000471496 TNS2Q63HR2 1409 aa16.9■□□□□ 0.3
LINC00888-202ENST00000471496 IL2RBP14784 551 aa16.89■□□□□ 0.29
LINC00888-202ENST00000471496 MEGF6O75095 1541 aa16.89■□□□□ 0.29
LINC00888-202ENST00000471496 MARCH10Q8NA82 808 aaPredicted RBP16.88■□□□□ 0.29
LINC00888-202ENST00000471496 CCDC125Q86Z20 511 aa16.87■□□□□ 0.29
LINC00888-202ENST00000471496 USHBP1Q8N6Y0 703 aa16.87■□□□□ 0.29
LINC00888-202ENST00000471496 POTEIP0CG38 1075 aa16.86■□□□□ 0.29
LINC00888-202ENST00000471496 EIF4A2Q14240 407 aaKnown RBP16.86■□□□□ 0.29
LINC00888-202ENST00000471496 FAM196AQ6ZSG2 479 aa16.86■□□□□ 0.29
LINC00888-202ENST00000471496 FAM212AQ96EL1 285 aa16.86■□□□□ 0.29
LINC00888-202ENST00000471496 OVOS2A0A0G2JMS6 1433 aa16.86■□□□□ 0.29
LINC00888-202ENST00000471496 EXOC5O00471 708 aa16.86■□□□□ 0.29
LINC00888-202ENST00000471496 BCL9O00512 1426 aa16.85■□□□□ 0.29
LINC00888-202ENST00000471496 EYA1Q99502 592 aa16.85■□□□□ 0.29
LINC00888-202ENST00000471496 PKD1L3Q7Z443 1732 aa16.84■□□□□ 0.29
LINC00888-202ENST00000471496 MTHFSP49914 203 aa16.83■□□□□ 0.28
LINC00888-202ENST00000471496 TRIM37O94972 964 aa16.82■□□□□ 0.28
LINC00888-202ENST00000471496 CNGB1Q14028 1251 aaPredicted RBP16.82■□□□□ 0.28
LINC00888-202ENST00000471496 DEFB132Q7Z7B7 95 aa16.82■□□□□ 0.28
LINC00888-202ENST00000471496 KIF12Q96FN5 646 aa16.82■□□□□ 0.28
LINC00888-202ENST00000471496 MS4A3Q96HJ5 214 aa16.81■□□□□ 0.28
LINC00888-202ENST00000471496 COL3A1P02461 1466 aaPredicted RBP16.81■□□□□ 0.28
LINC00888-202ENST00000471496 IGSF1Q8N6C5 1336 aa16.81■□□□□ 0.28
LINC00888-202ENST00000471496 NHSQ6T4R5 1651 aa16.8■□□□□ 0.28
LINC00888-202ENST00000471496 PTF1AQ7RTS3 328 aa16.8■□□□□ 0.28
LINC00888-202ENST00000471496 KLHL34Q8N239 644 aa16.8■□□□□ 0.28
LINC00888-202ENST00000471496 IL13P35225 146 aa16.8■□□□□ 0.28
LINC00888-202ENST00000471496 DDX10Q13206 875 aaKnown RBP16.8■□□□□ 0.28
LINC00888-202ENST00000471496 ZCRB1Q8TBF4 217 aaKnown RBP16.79■□□□□ 0.28
LINC00888-202ENST00000471496 RAPGEF4Q8WZA2 1011 aa16.79■□□□□ 0.28
LINC00888-202ENST00000471496 TATP17735 454 aaPredicted RBP16.78■□□□□ 0.28
LINC00888-202ENST00000471496 DOT1LQ8TEK3 1739 aa16.78■□□□□ 0.28
LINC00888-202ENST00000471496 RGPD3A6NKT7 1758 aaPredicted RBP16.77■□□□□ 0.28
LINC00888-202ENST00000471496 RGPD4Q7Z3J3 1758 aa16.77■□□□□ 0.28
LINC00888-202ENST00000471496 SF3B2Q13435 895 aaKnown RBP16.77■□□□□ 0.28
LINC00888-202ENST00000471496 DDX54Q8TDD1 881 aaKnown RBP16.77■□□□□ 0.28
LINC00888-202ENST00000471496 PARD3Q8TEW0 1356 aa16.77■□□□□ 0.27
LINC00888-202ENST00000471496 KAT6BQ8WYB5 2073 aa16.77■□□□□ 0.27
LINC00888-202ENST00000471496 RREB1Q92766 1687 aa16.77■□□□□ 0.27
LINC00888-202ENST00000471496 BTAF1O14981 1849 aa16.76■□□□□ 0.27
LINC00888-202ENST00000471496 PPP2R1AP30153 589 aa16.75■□□□□ 0.27
LINC00888-202ENST00000471496 KDRP35968 1356 aa16.75■□□□□ 0.27
LINC00888-202ENST00000471496 BAG6P46379 1132 aa16.75■□□□□ 0.27
LINC00888-202ENST00000471496 EN1Q05925 392 aaPredicted RBP16.75■□□□□ 0.27
LINC00888-202ENST00000471496 AEBP1Q8IUX7 1158 aa16.75■□□□□ 0.27
LINC00888-202ENST00000471496 SGIP1Q9BQI5 828 aa16.75■□□□□ 0.27
LINC00888-202ENST00000471496 BCL11BQ9C0K0 894 aaPredicted RBP16.75■□□□□ 0.27
LINC00888-202ENST00000471496 TOGARAM1Q9Y4F4 1720 aa16.75■□□□□ 0.27
LINC00888-202ENST00000471496 CYP27B1O15528 508 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms