RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 CAPN2P17655 700 aa5.13□□□□□ -1.59
VPS50-210ENST00000471188 FKBP5Q13451 457 aaPredicted RBP5.13□□□□□ -1.59
VPS50-210ENST00000471188 ITPRIPQ8IWB1 547 aa5.13□□□□□ -1.59
VPS50-210ENST00000471188 NGEFQ8N5V2 710 aa5.13□□□□□ -1.59
VPS50-210ENST00000471188 SPC24Q8NBT2 197 aa5.13□□□□□ -1.59
VPS50-210ENST00000471188 RTEL1-TNFRSF6BF6WH68 1400 aa5.13□□□□□ -1.59
VPS50-210ENST00000471188 DISP1Q96F81 1524 aa5.13□□□□□ -1.59
VPS50-210ENST00000471188 SIGLEC1Q9BZZ2 1709 aa5.13□□□□□ -1.59
VPS50-210ENST00000471188 ADCY5O95622 1261 aa5.13□□□□□ -1.59
VPS50-210ENST00000471188 TERF2Q15554 542 aa5.13□□□□□ -1.59
VPS50-210ENST00000471188 DDX27Q96GQ7 796 aaKnown RBP5.13□□□□□ -1.59
VPS50-210ENST00000471188 TSPYL1Q9H0U9 437 aa5.13□□□□□ -1.59
VPS50-210ENST00000471188 NINLQ9Y2I6 1382 aa5.13□□□□□ -1.59
VPS50-210ENST00000471188 KRT222Q8N1A0 295 aa5.12□□□□□ -1.59
VPS50-210ENST00000471188 ZNF592Q92610 1267 aa5.12□□□□□ -1.59
VPS50-210ENST00000471188 SYAP1Q96A49 352 aaPredicted RBP5.12□□□□□ -1.59
VPS50-210ENST00000471188 KRTAP3-3Q9BYR6 98 aa5.12□□□□□ -1.59
VPS50-210ENST00000471188 KRTAP3-2Q9BYR7 98 aa5.12□□□□□ -1.59
VPS50-210ENST00000471188 NSFL1CQ9UNZ2 370 aaKnown RBP5.12□□□□□ -1.59
VPS50-210ENST00000471188 ANKRD30AQ9BXX3 1397 aa5.12□□□□□ -1.59
VPS50-210ENST00000471188 RICTORQ6R327 1708 aa5.12□□□□□ -1.59
VPS50-210ENST00000471188 U2SURPO15042 1029 aaKnown RBP5.12□□□□□ -1.59
VPS50-210ENST00000471188 RARSP54136 660 aaKnown RBP5.12□□□□□ -1.59
VPS50-210ENST00000471188 TMF1P82094 1093 aa5.12□□□□□ -1.59
VPS50-210ENST00000471188 SLC20A2Q08357 652 aa5.12□□□□□ -1.59
VPS50-210ENST00000471188 NAA30Q147X3 362 aaPredicted RBP5.12□□□□□ -1.59
VPS50-210ENST00000471188 ANKRD7Q92527 254 aa5.12□□□□□ -1.59
VPS50-210ENST00000471188 MBD3O95983 291 aa5.12□□□□□ -1.59
VPS50-210ENST00000471188 RNF166Q96A37 237 aaPredicted RBP5.12□□□□□ -1.59
VPS50-210ENST00000471188 RSPH14Q9UHP6 348 aa5.12□□□□□ -1.59
VPS50-210ENST00000471188 LOC102724159A0A0B4J2E5 919 aa5.11□□□□□ -1.59
VPS50-210ENST00000471188 NPHP1O15259 732 aa5.11□□□□□ -1.59
VPS50-210ENST00000471188 GTF2A1P52655 376 aaPredicted RBP5.11□□□□□ -1.59
VPS50-210ENST00000471188 NCBP1Q09161 790 aaKnown RBP5.11□□□□□ -1.59
VPS50-210ENST00000471188 MVPQ14764 893 aaKnown RBP5.11□□□□□ -1.59
VPS50-210ENST00000471188 PWP2Q15269 919 aaKnown RBP5.11□□□□□ -1.59
VPS50-210ENST00000471188 TRMT2AQ8IZ69 625 aaKnown RBP5.11□□□□□ -1.59
VPS50-210ENST00000471188 C16orf45Q96MC5 204 aaPredicted RBP5.11□□□□□ -1.59
VPS50-210ENST00000471188 CTNNA3Q9UI47 895 aa5.11□□□□□ -1.59
VPS50-210ENST00000471188 ZNF777Q9ULD5 760 aaPredicted RBP5.11□□□□□ -1.59
VPS50-210ENST00000471188 INSRP06213 1382 aa5.11□□□□□ -1.59
VPS50-210ENST00000471188 ZMYM3Q14202 1370 aa5.11□□□□□ -1.59
VPS50-210ENST00000471188 MLECQ14165 292 aa5.11□□□□□ -1.59
VPS50-210ENST00000471188 DZIP1LQ8IYY4 767 aaKnown RBP5.11□□□□□ -1.59
VPS50-210ENST00000471188 ZGPATQ8N5A5 531 aaKnown RBP5.11□□□□□ -1.59
VPS50-210ENST00000471188 CRISPLD2Q9H0B8 497 aa5.11□□□□□ -1.59
VPS50-210ENST00000471188 TOMM22Q9NS69 142 aa5.11□□□□□ -1.59
VPS50-210ENST00000471188 IFT57Q9NWB7 429 aa5.11□□□□□ -1.59
VPS50-210ENST00000471188 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.11□□□□□ -1.59
VPS50-210ENST00000471188 DDX41Q9UJV9 622 aaKnown RBP5.11□□□□□ -1.59
VPS50-210ENST00000471188 V9GYY5 206 aaPredicted RBP5.11□□□□□ -1.59
VPS50-210ENST00000471188 SCAPERQ9BY12 1400 aa5.11□□□□□ -1.59
VPS50-210ENST00000471188 IQGAP2Q13576 1575 aa5.11□□□□□ -1.59
VPS50-210ENST00000471188 PATL2C9JE40 543 aaKnown RBP5.1□□□□□ -1.59
VPS50-210ENST00000471188 PHF14O94880 888 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 ANKRD45Q5TZF3 282 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 ZKSCAN2Q63HK3 967 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 WWC1Q8IX03 1113 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 GPATCH11Q8N954 259 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 GDPD2Q9HCC8 539 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 FEZ2Q9UHY8 353 aaPredicted RBP5.1□□□□□ -1.59
VPS50-210ENST00000471188 GCC2Q8IWJ2 1684 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 ZNF644Q9H582 1327 aaPredicted RBP5.1□□□□□ -1.59
VPS50-210ENST00000471188 SUPT6HQ7KZ85 1726 aaKnown RBP5.1□□□□□ -1.59
VPS50-210ENST00000471188 MAGI3Q5TCQ9 1506 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 HCLS1P14317 486 aaPredicted RBP5.1□□□□□ -1.59
VPS50-210ENST00000471188 HNRNPH2P55795 449 aaKnown RBP5.1□□□□□ -1.59
VPS50-210ENST00000471188 MAP3K9P80192 1104 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 CLEC17AQ6ZS10 378 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 DRC7Q8IY82 874 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 C10orf67Q8IYJ2 551 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 CNPY4Q8N129 248 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 CCDC112Q8NEF3 446 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 RTF1Q92541 710 aaKnown RBP5.1□□□□□ -1.59
VPS50-210ENST00000471188 KIF2CQ99661 725 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 ST7Q9NRC1 585 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 PYCARDQ9ULZ3 195 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 REREQ9P2R6 1566 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 RALGAPBQ86X10 1494 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 KIF14Q15058 1648 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 GOLGA6L6A8MZA4 724 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 CLGNO14967 610 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 SRPK2P78362 688 aaKnown RBP5.1□□□□□ -1.59
VPS50-210ENST00000471188 NOL8Q76FK4 1167 aaKnown RBP5.1□□□□□ -1.59
VPS50-210ENST00000471188 SMC4Q9NTJ3 1288 aa5.1□□□□□ -1.59
VPS50-210ENST00000471188 HAP1P54257 671 aaPredicted RBP5.09□□□□□ -1.59
VPS50-210ENST00000471188 RAD51AP2Q09MP3 1159 aa5.09□□□□□ -1.59
VPS50-210ENST00000471188 TBC1D9Q6ZT07 1266 aa5.09□□□□□ -1.59
VPS50-210ENST00000471188 KIF18AQ8NI77 898 aa5.09□□□□□ -1.59
VPS50-210ENST00000471188 NOL10Q9BSC4 688 aaKnown RBP5.09□□□□□ -1.59
VPS50-210ENST00000471188 SPTLC3Q9NUV7 552 aa5.09□□□□□ -1.59
VPS50-210ENST00000471188 DISP3Q9P2K9 1392 aa5.09□□□□□ -1.59
VPS50-210ENST00000471188 KIAA1107Q9UPP5 1409 aa5.09□□□□□ -1.59
VPS50-210ENST00000471188 TULP2O00295 520 aa5.09□□□□□ -1.59
VPS50-210ENST00000471188 TNNT1P13805 278 aa5.09□□□□□ -1.59
VPS50-210ENST00000471188 RABEP1Q15276 862 aa5.09□□□□□ -1.59
VPS50-210ENST00000471188 ZNF454Q8N9F8 522 aa5.09□□□□□ -1.59
VPS50-210ENST00000471188 RASSF4Q9H2L5 321 aa5.09□□□□□ -1.59
VPS50-210ENST00000471188 EFCAB5A4FU69 1503 aa5.09□□□□□ -1.6
VPS50-210ENST00000471188 CTIFO43310 598 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms