RNA–Protein interactions for RNA: ENST00000471157.2

CDKN1C-205, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

TSL 2

Gene CDKN1C, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-205ENST00000471157 PTF1AQ7RTS3 328 aa33.61■■■□□ 2.97
CDKN1C-205ENST00000471157 NPC1L1Q9UHC9 1359 aa33.6■■■□□ 2.97
CDKN1C-205ENST00000471157 ACSBG1Q96GR2 724 aa33.59■■■□□ 2.97
CDKN1C-205ENST00000471157 SHANK3Q9BYB0 1731 aa33.59■■■□□ 2.97
CDKN1C-205ENST00000471157 NHSQ6T4R5 1651 aa33.58■■■□□ 2.97
CDKN1C-205ENST00000471157 CNGB1Q14028 1251 aaPredicted RBP33.57■■■□□ 2.96
CDKN1C-205ENST00000471157 KCNQ2O43526 872 aa33.56■■■□□ 2.96
CDKN1C-205ENST00000471157 PLSCR1O15162 318 aa33.55■■■□□ 2.96
CDKN1C-205ENST00000471157 RREB1Q92766 1687 aa33.55■■■□□ 2.96
CDKN1C-205ENST00000471157 RGPD3A6NKT7 1758 aaPredicted RBP33.53■■■□□ 2.96
CDKN1C-205ENST00000471157 RGPD4Q7Z3J3 1758 aa33.53■■■□□ 2.96
CDKN1C-205ENST00000471157 PCDH11XQ9BZA7 1347 aa33.53■■■□□ 2.96
CDKN1C-205ENST00000471157 PCDH11YQ9BZA8 1340 aa33.53■■■□□ 2.96
CDKN1C-205ENST00000471157 MTHFSP49914 203 aa33.51■■■□□ 2.95
CDKN1C-205ENST00000471157 IGSF1Q8N6C5 1336 aa33.51■■■□□ 2.95
CDKN1C-205ENST00000471157 NUP188Q5SRE5 1749 aa33.49■■■□□ 2.95
CDKN1C-205ENST00000471157 PKD1L3Q7Z443 1732 aa33.48■■■□□ 2.95
CDKN1C-205ENST00000471157 DOT1LQ8TEK3 1739 aa33.46■■■□□ 2.95
CDKN1C-205ENST00000471157 SPG7Q9UQ90 795 aa33.46■■■□□ 2.95
CDKN1C-205ENST00000471157 KAT6BQ8WYB5 2073 aa33.45■■■□□ 2.95
CDKN1C-205ENST00000471157 PSDA5PKW4 1024 aaPredicted RBP33.45■■■□□ 2.95
CDKN1C-205ENST00000471157 ZEB1P37275 1124 aaPredicted RBP33.45■■■□□ 2.95
CDKN1C-205ENST00000471157 BTAF1O14981 1849 aa33.44■■■□□ 2.94
CDKN1C-205ENST00000471157 IL13P35225 146 aa33.44■■■□□ 2.94
CDKN1C-205ENST00000471157 SYTL4Q96C24 671 aaPredicted RBP33.44■■■□□ 2.94
CDKN1C-205ENST00000471157 CYP27B1O15528 508 aa33.43■■■□□ 2.94
CDKN1C-205ENST00000471157 PRIM1P49642 420 aaKnown RBP33.43■■■□□ 2.94
CDKN1C-205ENST00000471157 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.43■■■□□ 2.94
CDKN1C-205ENST00000471157 R3HDM1Q15032 1099 aaKnown RBP33.42■■■□□ 2.94
CDKN1C-205ENST00000471157 NBPF14Q5TI25 921 aa33.42■■■□□ 2.94
CDKN1C-205ENST00000471157 PLEKHG2Q9H7P9 1386 aa33.42■■■□□ 2.94
CDKN1C-205ENST00000471157 TXNRD1Q16881 649 aa33.41■■■□□ 2.94
CDKN1C-205ENST00000471157 PROM2Q8N271 834 aa33.4■■■□□ 2.94
CDKN1C-205ENST00000471157 SULT6B1Q6IMI4 303 aa33.37■■■□□ 2.93
CDKN1C-205ENST00000471157 AEBP1Q8IUX7 1158 aa33.37■■■□□ 2.93
CDKN1C-205ENST00000471157 DIAPH1O60610 1272 aaKnown RBP33.36■■■□□ 2.93
CDKN1C-205ENST00000471157 IFNL2Q8IZJ0 200 aa33.34■■■□□ 2.93
CDKN1C-205ENST00000471157 KDRP35968 1356 aa33.34■■■□□ 2.93
CDKN1C-205ENST00000471157 NKX1-1Q15270 411 aaPredicted RBP33.33■■■□□ 2.93
CDKN1C-205ENST00000471157 PLEKHO1Q53GL0 409 aaPredicted RBP33.33■■■□□ 2.93
CDKN1C-205ENST00000471157 PHKG2P15735 406 aa33.32■■■□□ 2.92
CDKN1C-205ENST00000471157 COL3A1P02461 1466 aaPredicted RBP33.31■■■□□ 2.92
CDKN1C-205ENST00000471157 AMOTQ4VCS5 1084 aa33.31■■■□□ 2.92
CDKN1C-205ENST00000471157 TOGARAM1Q9Y4F4 1720 aa33.3■■■□□ 2.92
CDKN1C-205ENST00000471157 ANO8Q9HCE9 1232 aaPredicted RBP33.29■■■□□ 2.92
CDKN1C-205ENST00000471157 PPP2R1AP30153 589 aa33.28■■■□□ 2.92
CDKN1C-205ENST00000471157 MPRIPQ6WCQ1 1025 aa33.27■■■□□ 2.92
CDKN1C-205ENST00000471157 CFAP53Q96M91 514 aa33.27■■■□□ 2.92
CDKN1C-205ENST00000471157 HMOX1P09601 288 aa33.26■■■□□ 2.91
CDKN1C-205ENST00000471157 ZNF530Q6P9A1 599 aaPredicted RBP33.26■■■□□ 2.91
CDKN1C-205ENST00000471157 DDX10Q13206 875 aaKnown RBP33.25■■■□□ 2.91
CDKN1C-205ENST00000471157 STK32BQ9NY57 414 aa33.25■■■□□ 2.91
CDKN1C-205ENST00000471157 SLC27A3Q5K4L6 730 aa33.24■■■□□ 2.91
CDKN1C-205ENST00000471157 U2SURPO15042 1029 aaKnown RBP33.23■■■□□ 2.91
CDKN1C-205ENST00000471157 ITGB4P16144 1822 aa33.23■■■□□ 2.91
CDKN1C-205ENST00000471157 HSP90AB1P08238 724 aaKnown RBP33.22■■■□□ 2.91
CDKN1C-205ENST00000471157 LRRC4BQ9NT99 713 aa33.22■■■□□ 2.91
CDKN1C-205ENST00000471157 C1orf141Q5JVX7 400 aa33.21■■■□□ 2.91
CDKN1C-205ENST00000471157 LY75O60449 1722 aa33.21■■■□□ 2.91
CDKN1C-205ENST00000471157 PAPPAQ13219 1627 aa33.2■■■□□ 2.91
CDKN1C-205ENST00000471157 SLC15A2Q16348 729 aa33.19■■■□□ 2.9
CDKN1C-205ENST00000471157 PIGBQ92521 554 aa33.19■■■□□ 2.9
CDKN1C-205ENST00000471157 DCAF5Q96JK2 942 aa33.19■■■□□ 2.9
CDKN1C-205ENST00000471157 TMOD3Q9NYL9 352 aa33.19■■■□□ 2.9
CDKN1C-205ENST00000471157 SRCAPQ6ZRS2 3230 aa33.18■■■□□ 2.9
CDKN1C-205ENST00000471157 LRP5O75197 1615 aa33.17■■■□□ 2.9
CDKN1C-205ENST00000471157 CCNL1Q9UK58 526 aaPredicted RBP33.17■■■□□ 2.9
CDKN1C-205ENST00000471157 PALLDQ8WX93 1383 aa33.17■■■□□ 2.9
CDKN1C-205ENST00000471157 SMARCC1Q92922 1105 aaPredicted RBP33.16■■■□□ 2.9
CDKN1C-205ENST00000471157 KCNQ4P56696 695 aa33.15■■■□□ 2.9
CDKN1C-205ENST00000471157 NUDCQ9Y266 331 aa33.15■■■□□ 2.9
CDKN1C-205ENST00000471157 KDM6AO15550 1401 aaPredicted RBP33.14■■■□□ 2.9
CDKN1C-205ENST00000471157 ERVV-2B6SEH9 535 aa33.14■■■□□ 2.9
CDKN1C-205ENST00000471157 ZNF827Q17R98 1081 aa33.12■■■□□ 2.89
CDKN1C-205ENST00000471157 AKAP4Q5JQC9 854 aa33.11■■■□□ 2.89
CDKN1C-205ENST00000471157 RALBP1Q15311 655 aa33.09■■■□□ 2.89
CDKN1C-205ENST00000471157 MTHFSDQ2M296 383 aaKnown RBP33.09■■■□□ 2.89
CDKN1C-205ENST00000471157 AKT1S1Q96B36 256 aa33.09■■■□□ 2.89
CDKN1C-205ENST00000471157 CASZ1Q86V15 1759 aa33.09■■■□□ 2.89
CDKN1C-205ENST00000471157 CABP4P57796 275 aa33.08■■■□□ 2.89
CDKN1C-205ENST00000471157 PDGFDQ9GZP0 370 aaPredicted RBP33.07■■■□□ 2.88
CDKN1C-205ENST00000471157 ASAP1Q9ULH1 1129 aa33.07■■■□□ 2.88
CDKN1C-205ENST00000471157 U2AF1L5P0DN76 240 aaPredicted RBP33.06■■■□□ 2.88
CDKN1C-205ENST00000471157 U2AF1Q01081 240 aaKnown RBP eCLIP33.06■■■□□ 2.88
CDKN1C-205ENST00000471157 HMGB2P26583 209 aaKnown RBP33.05■■■□□ 2.88
CDKN1C-205ENST00000471157 ATG3Q9NT62 314 aa33.04■■■□□ 2.88
CDKN1C-205ENST00000471157 RSPH6AQ9H0K4 717 aa33.03■■■□□ 2.88
CDKN1C-205ENST00000471157 SPON1Q9HCB6 807 aa33.03■■■□□ 2.88
CDKN1C-205ENST00000471157 TFCP2L1Q9NZI6 479 aa33.03■■■□□ 2.88
CDKN1C-205ENST00000471157 C5P01031 1676 aa33.03■■■□□ 2.88
CDKN1C-205ENST00000471157 SCN11AQ9UI33 1791 aa33.02■■■□□ 2.88
CDKN1C-205ENST00000471157 LOC102724428A0A0B4J2F2 783 aa33.02■■■□□ 2.88
CDKN1C-205ENST00000471157 PRKAR2BP31323 418 aa33.02■■■□□ 2.88
CDKN1C-205ENST00000471157 SIK1P57059 783 aa33.02■■■□□ 2.88
CDKN1C-205ENST00000471157 GAS2L2Q8NHY3 880 aa33.01■■■□□ 2.87
CDKN1C-205ENST00000471157 ZBTB7AO95365 584 aa33■■■□□ 2.87
CDKN1C-205ENST00000471157 NFATC2IPQ8NCF5 419 aa32.99■■■□□ 2.87
CDKN1C-205ENST00000471157 RNMTO43148 476 aaKnown RBP32.98■■■□□ 2.87
CDKN1C-205ENST00000471157 FCHSD2O94868 740 aa32.98■■■□□ 2.87
CDKN1C-205ENST00000471157 QSER1Q2KHR3 1735 aa32.98■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms