RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 SIRT1Q96EB6 747 aa8.89□□□□□ -0.99
VARS-222ENST00000470953 VEGFAP15692 232 aaPredicted RBP8.88□□□□□ -0.99
VARS-222ENST00000470953 SMIM5Q71RC9 77 aa8.88□□□□□ -0.99
VARS-222ENST00000470953 NGDNQ8NEJ9 315 aaKnown RBP8.88□□□□□ -0.99
VARS-222ENST00000470953 CDCA7Q9BWT1 371 aaPredicted RBP8.88□□□□□ -0.99
VARS-222ENST00000470953 TSKSQ9UJT2 592 aa8.88□□□□□ -0.99
VARS-222ENST00000470953 USP54Q70EL1 1684 aa8.88□□□□□ -0.99
VARS-222ENST00000470953 ADAMTS7Q9UKP4 1686 aa8.88□□□□□ -0.99
VARS-222ENST00000470953 ZBTB7CA1YPR0 619 aa8.87□□□□□ -0.99
VARS-222ENST00000470953 RGL3Q3MIN7 710 aa8.87□□□□□ -0.99
VARS-222ENST00000470953 LY75O60449 1722 aa8.86□□□□□ -0.99
VARS-222ENST00000470953 FCHSD2O94868 740 aa8.86□□□□□ -0.99
VARS-222ENST00000470953 MAP2K1Q02750 393 aaPredicted RBP8.86□□□□□ -0.99
VARS-222ENST00000470953 DGKZQ13574 1117 aa8.86□□□□□ -0.99
VARS-222ENST00000470953 ZNF219Q9P2Y4 722 aaPredicted RBP8.86□□□□□ -0.99
VARS-222ENST00000470953 PIK3C2GO75747 1445 aa8.86□□□□□ -0.99
VARS-222ENST00000470953 SPATA31E1Q6ZUB1 1445 aa8.86□□□□□ -0.99
VARS-222ENST00000470953 KAT6BQ8WYB5 2073 aa8.85□□□□□ -0.99
VARS-222ENST00000470953 ABCC6O95255 1503 aa8.85□□□□□ -0.99
VARS-222ENST00000470953 A0A0G2JLW4 131 aa8.85□□□□□ -0.99
VARS-222ENST00000470953 LTBP1Q14766 1721 aa8.85□□□□□ -0.99
VARS-222ENST00000470953 SBF1O95248 1867 aa8.85□□□□□ -0.99
VARS-222ENST00000470953 BRCA1P38398 1863 aaKnown RBP8.85□□□□□ -0.99
VARS-222ENST00000470953 KIF13BQ9NQT8 1826 aa8.84□□□□□ -0.99
VARS-222ENST00000470953 WDR17Q8IZU2 1322 aa8.84□□□□□ -0.99
VARS-222ENST00000470953 POTECB2RU33 542 aa8.84□□□□□ -0.99
VARS-222ENST00000470953 CFAP70Q5T0N1 1121 aa8.84□□□□□ -0.99
VARS-222ENST00000470953 ARFGEF1Q9Y6D6 1849 aa8.84□□□□□ -0.99
VARS-222ENST00000470953 ERBB3P21860 1342 aa8.83□□□□□ -1
VARS-222ENST00000470953 MINK1Q8N4C8 1332 aaPredicted RBP8.83□□□□□ -1
VARS-222ENST00000470953 ITSN1Q15811 1721 aa8.83□□□□□ -1
VARS-222ENST00000470953 CASP8AP2Q9UKL3 1982 aa8.83□□□□□ -1
VARS-222ENST00000470953 POTEIP0CG38 1075 aa8.83□□□□□ -1
VARS-222ENST00000470953 POTEJP0CG39 1038 aa8.83□□□□□ -1
VARS-222ENST00000470953 C14orf93Q9H972 538 aaKnown RBP8.83□□□□□ -1
VARS-222ENST00000470953 POGKQ9P215 609 aa8.83□□□□□ -1
VARS-222ENST00000470953 THSD7BQ9C0I4 1608 aa8.83□□□□□ -1
VARS-222ENST00000470953 PASKQ96RG2 1323 aa8.82□□□□□ -1
VARS-222ENST00000470953 WDR33Q9C0J8 1336 aaKnown RBP8.82□□□□□ -1
VARS-222ENST00000470953 GLTPD2A6NH11 291 aa8.82□□□□□ -1
VARS-222ENST00000470953 GCP02774 474 aa8.82□□□□□ -1
VARS-222ENST00000470953 CHADLQ6NUI6 762 aa8.82□□□□□ -1
VARS-222ENST00000470953 CCNL1Q9UK58 526 aaPredicted RBP8.82□□□□□ -1
VARS-222ENST00000470953 TMEM88BA6NKF7 163 aa8.81□□□□□ -1
VARS-222ENST00000470953 WASLO00401 505 aaPredicted RBP8.81□□□□□ -1
VARS-222ENST00000470953 DPEP1P16444 411 aa8.81□□□□□ -1
VARS-222ENST00000470953 AMIGO3Q86WK7 504 aa8.81□□□□□ -1
VARS-222ENST00000470953 AXIN2Q9Y2T1 843 aa8.81□□□□□ -1
VARS-222ENST00000470953 C5P01031 1676 aa8.81□□□□□ -1
VARS-222ENST00000470953 PPIP5K1Q6PFW1 1433 aa8.8□□□□□ -1
VARS-222ENST00000470953 MEGF6O75095 1541 aa8.8□□□□□ -1
VARS-222ENST00000470953 TOGARAM1Q9Y4F4 1720 aa8.8□□□□□ -1
VARS-222ENST00000470953 RASSF10A6NK89 507 aa8.8□□□□□ -1
VARS-222ENST00000470953 TGFB2P61812 414 aa8.8□□□□□ -1
VARS-222ENST00000470953 NBPF15Q8N660 670 aa8.8□□□□□ -1
VARS-222ENST00000470953 CARD10Q9BWT7 1032 aa8.8□□□□□ -1
VARS-222ENST00000470953 COL6A3P12111 3177 aa8.8□□□□□ -1
VARS-222ENST00000470953 RGPD5Q99666 1765 aa8.79□□□□□ -1
VARS-222ENST00000470953 DEFB115Q30KQ5 88 aa8.79□□□□□ -1
VARS-222ENST00000470953 ABTB2Q8N961 1025 aa8.79□□□□□ -1
VARS-222ENST00000470953 BEGAINQ9BUH8 593 aa8.79□□□□□ -1
VARS-222ENST00000470953 TIAM2Q8IVF5 1701 aa8.79□□□□□ -1
VARS-222ENST00000470953 NSD2O96028 1365 aa8.78□□□□□ -1
VARS-222ENST00000470953 RASSF7Q02833 373 aa8.78□□□□□ -1
VARS-222ENST00000470953 NUDT16Q96DE0 195 aaKnown RBP8.78□□□□□ -1
VARS-222ENST00000470953 DCAF5Q96JK2 942 aa8.78□□□□□ -1
VARS-222ENST00000470953 TRAK1Q9UPV9 953 aa8.78□□□□□ -1
VARS-222ENST00000470953 ZC3H4Q9UPT8 1303 aaKnown RBP8.78□□□□□ -1
VARS-222ENST00000470953 FLAD1Q8NFF5 587 aa8.77□□□□□ -1.01
VARS-222ENST00000470953 SLC4A1APQ9BWU0 796 aaKnown RBP8.77□□□□□ -1.01
VARS-222ENST00000470953 KDM6AO15550 1401 aaPredicted RBP8.77□□□□□ -1.01
VARS-222ENST00000470953 ACEP12821 1306 aa8.77□□□□□ -1.01
VARS-222ENST00000470953 PHF14O94880 888 aa8.76□□□□□ -1.01
VARS-222ENST00000470953 CSB-PGBD3P0DP91 1061 aa8.76□□□□□ -1.01
VARS-222ENST00000470953 KCNA3P22001 575 aa8.76□□□□□ -1.01
VARS-222ENST00000470953 SYTL4Q96C24 671 aaPredicted RBP8.76□□□□□ -1.01
VARS-222ENST00000470953 POLR3AO14802 1390 aaPredicted RBP8.75□□□□□ -1.01
VARS-222ENST00000470953 EIF3AQ14152 1382 aaKnown RBP8.75□□□□□ -1.01
VARS-222ENST00000470953 CCDC7Q96M83 1385 aa8.75□□□□□ -1.01
VARS-222ENST00000470953 DOT1LQ8TEK3 1739 aa8.75□□□□□ -1.01
VARS-222ENST00000470953 TAF1LQ8IZX4 1826 aa8.75□□□□□ -1.01
VARS-222ENST00000470953 MMP10P09238 476 aa8.74□□□□□ -1.01
VARS-222ENST00000470953 PRIM1P49642 420 aaKnown RBP8.74□□□□□ -1.01
VARS-222ENST00000470953 MNX1P50219 401 aaPredicted RBP8.74□□□□□ -1.01
VARS-222ENST00000470953 NLRP13Q86W25 1043 aa8.74□□□□□ -1.01
VARS-222ENST00000470953 UBR3Q6ZT12 1888 aa8.74□□□□□ -1.01
VARS-222ENST00000470953 SLIT3O75094 1523 aa8.74□□□□□ -1.01
VARS-222ENST00000470953 ADGRB1O14514 1584 aa8.73□□□□□ -1.01
VARS-222ENST00000470953 ITGBL1O95965 494 aaPredicted RBP8.73□□□□□ -1.01
VARS-222ENST00000470953 GRM1Q13255 1194 aa8.73□□□□□ -1.01
VARS-222ENST00000470953 C4BP0C0L5 1744 aa8.73□□□□□ -1.01
VARS-222ENST00000470953 MKI67P46013 3256 aaKnown RBP8.72□□□□□ -1.01
VARS-222ENST00000470953 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.72□□□□□ -1.01
VARS-222ENST00000470953 DALRD3Q5D0E6 543 aaKnown RBP8.72□□□□□ -1.01
VARS-222ENST00000470953 PPARGC1BQ86YN6 1023 aaKnown RBP8.72□□□□□ -1.01
VARS-222ENST00000470953 CAPNS2Q96L46 248 aa8.72□□□□□ -1.01
VARS-222ENST00000470953 GPR101Q96P66 508 aaPredicted RBP8.72□□□□□ -1.01
VARS-222ENST00000470953 CDK19Q9BWU1 502 aa8.72□□□□□ -1.01
VARS-222ENST00000470953 PIM2Q9P1W9 311 aa8.72□□□□□ -1.01
VARS-222ENST00000470953 ABT1Q9ULW3 272 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms