RNA–Protein interactions for RNA: ENST00000470243.5

SRRM1-208, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-208ENST00000470243 NBPF20Q3BBV1 942 aa7.54□□□□□ -1.2
SRRM1-208ENST00000470243 CRTC2Q53ET0 693 aaPredicted RBP7.54□□□□□ -1.2
SRRM1-208ENST00000470243 OXLD1Q5BKU9 147 aa7.54□□□□□ -1.2
SRRM1-208ENST00000470243 STK32AQ8WU08 396 aa7.54□□□□□ -1.2
SRRM1-208ENST00000470243 MKRN1Q9UHC7 482 aaKnown RBP7.54□□□□□ -1.2
SRRM1-208ENST00000470243 USTQ9Y2C2 406 aa7.54□□□□□ -1.2
SRRM1-208ENST00000470243 ESPNB1AK53 854 aa7.53□□□□□ -1.2
SRRM1-208ENST00000470243 USP17L15C9J2P7 530 aa7.53□□□□□ -1.2
SRRM1-208ENST00000470243 USP17L10C9JJH3 530 aa7.53□□□□□ -1.2
SRRM1-208ENST00000470243 USP17L13C9JLJ4 530 aa7.53□□□□□ -1.2
SRRM1-208ENST00000470243 USP17L12C9JPN9 530 aa7.53□□□□□ -1.2
SRRM1-208ENST00000470243 USP17L11C9JVI0 530 aa7.53□□□□□ -1.2
SRRM1-208ENST00000470243 USP17L21D6R901 530 aa7.53□□□□□ -1.2
SRRM1-208ENST00000470243 USP17L18D6R9N7 530 aa7.53□□□□□ -1.2
SRRM1-208ENST00000470243 USP17L22D6RA61 530 aa7.53□□□□□ -1.2
SRRM1-208ENST00000470243 USP17L17D6RBQ6 530 aa7.53□□□□□ -1.2
SRRM1-208ENST00000470243 USP17L19D6RCP7 530 aa7.53□□□□□ -1.2
SRRM1-208ENST00000470243 USP17L20D6RJB6 530 aa7.53□□□□□ -1.2
SRRM1-208ENST00000470243 USP17L24Q0WX57 530 aa7.53□□□□□ -1.2
SRRM1-208ENST00000470243 EML3Q32P44 896 aa7.53□□□□□ -1.2
SRRM1-208ENST00000470243 TRIM46Q7Z4K8 759 aa7.53□□□□□ -1.2
SRRM1-208ENST00000470243 CDCA7Q9BWT1 371 aaPredicted RBP7.53□□□□□ -1.2
SRRM1-208ENST00000470243 PODXL2Q9NZ53 605 aa7.53□□□□□ -1.2
SRRM1-208ENST00000470243 CCDC180Q9P1Z9 1646 aa7.52□□□□□ -1.2
SRRM1-208ENST00000470243 TMEM88BA6NKF7 163 aa7.52□□□□□ -1.21
SRRM1-208ENST00000470243 CAPN5O15484 640 aaPredicted RBP7.52□□□□□ -1.21
SRRM1-208ENST00000470243 VARSP26640 1264 aaKnown RBP7.52□□□□□ -1.21
SRRM1-208ENST00000470243 MAP7D1Q3KQU3 841 aa7.52□□□□□ -1.21
SRRM1-208ENST00000470243 AEBP1Q8IUX7 1158 aa7.52□□□□□ -1.21
SRRM1-208ENST00000470243 EHBP1Q8NDI1 1231 aa7.52□□□□□ -1.21
SRRM1-208ENST00000470243 IRF7Q92985 503 aa7.52□□□□□ -1.21
SRRM1-208ENST00000470243 NOVA2Q9UNW9 492 aaKnown RBP7.52□□□□□ -1.21
SRRM1-208ENST00000470243 PCDHB11Q9Y5F2 797 aa7.52□□□□□ -1.21
SRRM1-208ENST00000470243 TLL2Q9Y6L7 1015 aa7.52□□□□□ -1.21
SRRM1-208ENST00000470243 FAM196BA6NMK8 535 aa7.51□□□□□ -1.21
SRRM1-208ENST00000470243 RASA1P20936 1047 aa7.51□□□□□ -1.21
SRRM1-208ENST00000470243 CLDN10P78369 228 aa7.51□□□□□ -1.21
SRRM1-208ENST00000470243 TMEM164Q5U3C3 297 aa7.51□□□□□ -1.21
SRRM1-208ENST00000470243 VASH1Q7L8A9 365 aaPredicted RBP7.51□□□□□ -1.21
SRRM1-208ENST00000470243 KCTD15Q96SI1 283 aaPredicted RBP7.51□□□□□ -1.21
SRRM1-208ENST00000470243 CDV3Q9UKY7 258 aaKnown RBP7.51□□□□□ -1.21
SRRM1-208ENST00000470243 ATP5J2-PTCD1G3V325 749 aa7.5□□□□□ -1.21
SRRM1-208ENST00000470243 PTK7Q13308 1070 aa7.5□□□□□ -1.21
SRRM1-208ENST00000470243 ELOAQ14241 798 aaKnown RBP7.5□□□□□ -1.21
SRRM1-208ENST00000470243 ARID5BQ14865 1188 aa7.5□□□□□ -1.21
SRRM1-208ENST00000470243 INTS6LQ5JSJ4 861 aaKnown RBP7.5□□□□□ -1.21
SRRM1-208ENST00000470243 RNF20Q5VTR2 975 aa7.5□□□□□ -1.21
SRRM1-208ENST00000470243 ZNF594Q96JF6 807 aaPredicted RBP7.5□□□□□ -1.21
SRRM1-208ENST00000470243 KIAA1024Q9UPX6 916 aa7.5□□□□□ -1.21
SRRM1-208ENST00000470243 ERBB4Q15303 1308 aa7.5□□□□□ -1.21
SRRM1-208ENST00000470243 LOC100996750A0A140TA64 210 aa7.49□□□□□ -1.21
SRRM1-208ENST00000470243 ZBTB7CA1YPR0 619 aa7.49□□□□□ -1.21
SRRM1-208ENST00000470243 LZTS3O60299 673 aaPredicted RBP7.49□□□□□ -1.21
SRRM1-208ENST00000470243 FSHRP23945 695 aa7.49□□□□□ -1.21
SRRM1-208ENST00000470243 LARP1Q6PKG0 1096 aaKnown RBP7.49□□□□□ -1.21
SRRM1-208ENST00000470243 OGFOD1Q8N543 542 aa7.49□□□□□ -1.21
SRRM1-208ENST00000470243 KRTAP4-6Q9BYQ5 205 aa7.49□□□□□ -1.21
SRRM1-208ENST00000470243 NOD1Q9Y239 953 aa7.49□□□□□ -1.21
SRRM1-208ENST00000470243 MAP4K5Q9Y4K4 846 aa7.49□□□□□ -1.21
SRRM1-208ENST00000470243 WASF2Q9Y6W5 498 aa7.49□□□□□ -1.21
SRRM1-208ENST00000470243 H3BM21 787 aa7.48□□□□□ -1.21
SRRM1-208ENST00000470243 SIAH2O43255 324 aa7.48□□□□□ -1.21
SRRM1-208ENST00000470243 GTF2IP78347 998 aa7.48□□□□□ -1.21
SRRM1-208ENST00000470243 PDE4CQ08493 712 aa7.48□□□□□ -1.21
SRRM1-208ENST00000470243 SEPT12Q8IYM1 358 aa7.48□□□□□ -1.21
SRRM1-208ENST00000470243 KCTD17Q8N5Z5 321 aa7.48□□□□□ -1.21
SRRM1-208ENST00000470243 DNAAF2Q9NVR5 837 aaKnown RBP7.48□□□□□ -1.21
SRRM1-208ENST00000470243 ERVH48-1M5A8F1 160 aa7.47□□□□□ -1.21
SRRM1-208ENST00000470243 SCTRP47872 440 aa7.47□□□□□ -1.21
SRRM1-208ENST00000470243 TRIM50Q86XT4 487 aa7.47□□□□□ -1.21
SRRM1-208ENST00000470243 ATP1A2P50993 1020 aa7.46□□□□□ -1.22
SRRM1-208ENST00000470243 DPYDQ12882 1025 aa7.46□□□□□ -1.22
SRRM1-208ENST00000470243 ANKMY2Q8IV38 441 aa7.46□□□□□ -1.22
SRRM1-208ENST00000470243 ZFP42Q96MM3 310 aa7.46□□□□□ -1.22
SRRM1-208ENST00000470243 NPAS3Q8IXF0 933 aa7.45□□□□□ -1.22
SRRM1-208ENST00000470243 FAM200AQ8TCP9 573 aa7.45□□□□□ -1.22
SRRM1-208ENST00000470243 CDK15Q96Q40 435 aa7.45□□□□□ -1.22
SRRM1-208ENST00000470243 TMPRSS4Q9NRS4 437 aa7.45□□□□□ -1.22
SRRM1-208ENST00000470243 SLAIN2Q9P270 581 aa7.45□□□□□ -1.22
SRRM1-208ENST00000470243 PCDHGA11Q9Y5H2 935 aa7.45□□□□□ -1.22
SRRM1-208ENST00000470243 ZBTB7BO15156 539 aaPredicted RBP7.44□□□□□ -1.22
SRRM1-208ENST00000470243 DKK1O94907 266 aa7.44□□□□□ -1.22
SRRM1-208ENST00000470243 BRD1O95696 1058 aa7.44□□□□□ -1.22
SRRM1-208ENST00000470243 ADH1CP00326 375 aa7.44□□□□□ -1.22
SRRM1-208ENST00000470243 GRM5P41594 1212 aa7.44□□□□□ -1.22
SRRM1-208ENST00000470243 PSME1Q06323 249 aa7.44□□□□□ -1.22
SRRM1-208ENST00000470243 SIX5Q8N196 739 aa7.44□□□□□ -1.22
SRRM1-208ENST00000470243 LARGE2Q8N3Y3 721 aa7.44□□□□□ -1.22
SRRM1-208ENST00000470243 TPCN2Q8NHX9 752 aa7.44□□□□□ -1.22
SRRM1-208ENST00000470243 CYLDQ9NQC7 956 aa7.44□□□□□ -1.22
SRRM1-208ENST00000470243 SOBPA7XYQ1 873 aa7.43□□□□□ -1.22
SRRM1-208ENST00000470243 FAM69CQ0P6D2 419 aa7.43□□□□□ -1.22
SRRM1-208ENST00000470243 USP4Q13107 963 aa7.43□□□□□ -1.22
SRRM1-208ENST00000470243 SFI1A8K8P3 1242 aa7.42□□□□□ -1.22
SRRM1-208ENST00000470243 MYCP01106 439 aaPredicted RBP7.42□□□□□ -1.22
SRRM1-208ENST00000470243 NR3C2P08235 984 aa7.42□□□□□ -1.22
SRRM1-208ENST00000470243 ERVK-9P63128 1117 aa7.42□□□□□ -1.22
SRRM1-208ENST00000470243 CCDC102BQ68D86 513 aa7.42□□□□□ -1.22
SRRM1-208ENST00000470243 CCDC125Q86Z20 511 aa7.42□□□□□ -1.22
SRRM1-208ENST00000470243 ZNF784Q8NCA9 323 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms