RNA–Protein interactions for RNA: ENST00000470199.2

LMNA-211, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-211ENST00000470199 SHANK3Q9BYB0 1731 aa24.12■■□□□ 1.45
LMNA-211ENST00000470199 RGPD1P0DJD0 1748 aa24.11■■□□□ 1.45
LMNA-211ENST00000470199 DIAPH1O60610 1272 aaKnown RBP24.11■■□□□ 1.45
LMNA-211ENST00000470199 CCDC125Q86Z20 511 aa24.11■■□□□ 1.45
LMNA-211ENST00000470199 SULT6B1Q6IMI4 303 aa24.1■■□□□ 1.45
LMNA-211ENST00000470199 ACSBG1Q96GR2 724 aa24.09■■□□□ 1.45
LMNA-211ENST00000470199 KCNQ2O43526 872 aa24.08■■□□□ 1.45
LMNA-211ENST00000470199 TNS1Q9HBL0 1735 aaKnown RBP24.07■■□□□ 1.44
LMNA-211ENST00000470199 CYP27B1O15528 508 aa24.07■■□□□ 1.44
LMNA-211ENST00000470199 HMOX1P09601 288 aa24.07■■□□□ 1.44
LMNA-211ENST00000470199 SF3B2Q13435 895 aaKnown RBP24.07■■□□□ 1.44
LMNA-211ENST00000470199 BCL9O00512 1426 aa24.07■■□□□ 1.44
LMNA-211ENST00000470199 SBF2Q86WG5 1849 aa24.05■■□□□ 1.44
LMNA-211ENST00000470199 APBA3O96018 575 aa24.05■■□□□ 1.44
LMNA-211ENST00000470199 EN1Q05925 392 aaPredicted RBP24.05■■□□□ 1.44
LMNA-211ENST00000470199 U2SURPO15042 1029 aaKnown RBP24.04■■□□□ 1.44
LMNA-211ENST00000470199 RALBP1Q15311 655 aa24.04■■□□□ 1.44
LMNA-211ENST00000470199 PKD1L3Q7Z443 1732 aa24.04■■□□□ 1.44
LMNA-211ENST00000470199 KDRP35968 1356 aa24.03■■□□□ 1.44
LMNA-211ENST00000470199 CFAP53Q96M91 514 aa24.03■■□□□ 1.44
LMNA-211ENST00000470199 BCL11BQ9C0K0 894 aaPredicted RBP24.02■■□□□ 1.44
LMNA-211ENST00000470199 SPG7Q9UQ90 795 aa24.02■■□□□ 1.44
LMNA-211ENST00000470199 PCDH11XQ9BZA7 1347 aa24.02■■□□□ 1.44
LMNA-211ENST00000470199 PCDH11YQ9BZA8 1340 aa24.02■■□□□ 1.44
LMNA-211ENST00000470199 BAG6P46379 1132 aa24.01■■□□□ 1.43
LMNA-211ENST00000470199 EZH2Q15910 746 aaKnown RBP24■■□□□ 1.43
LMNA-211ENST00000470199 PRKRIP1Q9H875 184 aaPredicted RBP24■■□□□ 1.43
LMNA-211ENST00000470199 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24■■□□□ 1.43
LMNA-211ENST00000470199 PHKG2P15735 406 aa23.98■■□□□ 1.43
LMNA-211ENST00000470199 PRIM1P49642 420 aaKnown RBP23.98■■□□□ 1.43
LMNA-211ENST00000470199 CAMKK2Q96RR4 588 aa23.98■■□□□ 1.43
LMNA-211ENST00000470199 NHSQ6T4R5 1651 aa23.98■■□□□ 1.43
LMNA-211ENST00000470199 PLEKHO1Q53GL0 409 aaPredicted RBP23.97■■□□□ 1.43
LMNA-211ENST00000470199 DOT1LQ8TEK3 1739 aa23.96■■□□□ 1.43
LMNA-211ENST00000470199 MYBBP1AQ9BQG0 1328 aaKnown RBP23.96■■□□□ 1.43
LMNA-211ENST00000470199 SYTL4Q96C24 671 aaPredicted RBP23.96■■□□□ 1.43
LMNA-211ENST00000470199 NKX1-1Q15270 411 aaPredicted RBP23.95■■□□□ 1.42
LMNA-211ENST00000470199 ZNF530Q6P9A1 599 aaPredicted RBP23.95■■□□□ 1.42
LMNA-211ENST00000470199 IFNL2Q8IZJ0 200 aa23.95■■□□□ 1.42
LMNA-211ENST00000470199 U2AF1L5P0DN76 240 aaPredicted RBP23.94■■□□□ 1.42
LMNA-211ENST00000470199 U2AF1Q01081 240 aaKnown RBP eCLIP23.94■■□□□ 1.42
LMNA-211ENST00000470199 TOGARAM1Q9Y4F4 1720 aa23.93■■□□□ 1.42
LMNA-211ENST00000470199 AMOTQ4VCS5 1084 aa23.93■■□□□ 1.42
LMNA-211ENST00000470199 RSPH6AQ9H0K4 717 aa23.93■■□□□ 1.42
LMNA-211ENST00000470199 NUDCQ9Y266 331 aa23.93■■□□□ 1.42
LMNA-211ENST00000470199 PLEKHG2Q9H7P9 1386 aa23.92■■□□□ 1.42
LMNA-211ENST00000470199 MTHFSDQ2M296 383 aaKnown RBP23.92■■□□□ 1.42
LMNA-211ENST00000470199 PROM2Q8N271 834 aa23.92■■□□□ 1.42
LMNA-211ENST00000470199 PHACTR3Q96KR7 559 aa23.91■■□□□ 1.42
LMNA-211ENST00000470199 BTAF1O14981 1849 aa23.9■■□□□ 1.42
LMNA-211ENST00000470199 PLSCR1O15162 318 aa23.9■■□□□ 1.42
LMNA-211ENST00000470199 PRKAR2BP31323 418 aa23.9■■□□□ 1.42
LMNA-211ENST00000470199 KDM6AO15550 1401 aaPredicted RBP23.88■■□□□ 1.41
LMNA-211ENST00000470199 MPRIPQ6WCQ1 1025 aa23.88■■□□□ 1.41
LMNA-211ENST00000470199 KAT6BQ8WYB5 2073 aa23.87■■□□□ 1.41
LMNA-211ENST00000470199 CCDC184Q52MB2 194 aa23.86■■□□□ 1.41
LMNA-211ENST00000470199 C1orf141Q5JVX7 400 aa23.86■■□□□ 1.41
LMNA-211ENST00000470199 PIGBQ92521 554 aa23.86■■□□□ 1.41
LMNA-211ENST00000470199 FCHSD2O94868 740 aa23.85■■□□□ 1.41
LMNA-211ENST00000470199 TXNRD1Q16881 649 aa23.85■■□□□ 1.41
LMNA-211ENST00000470199 RREB1Q92766 1687 aa23.85■■□□□ 1.41
LMNA-211ENST00000470199 AKAP4Q5JQC9 854 aa23.84■■□□□ 1.41
LMNA-211ENST00000470199 DCAF5Q96JK2 942 aa23.84■■□□□ 1.41
LMNA-211ENST00000470199 LGR6Q9HBX8 967 aa23.84■■□□□ 1.41
LMNA-211ENST00000470199 ITGB4P16144 1822 aa23.83■■□□□ 1.41
LMNA-211ENST00000470199 KCNQ4P56696 695 aa23.83■■□□□ 1.41
LMNA-211ENST00000470199 NUP188Q5SRE5 1749 aa23.82■■□□□ 1.4
LMNA-211ENST00000470199 HSP90AB1P08238 724 aaKnown RBP23.82■■□□□ 1.4
LMNA-211ENST00000470199 RGPD3A6NKT7 1758 aaPredicted RBP23.81■■□□□ 1.4
LMNA-211ENST00000470199 RGPD4Q7Z3J3 1758 aa23.81■■□□□ 1.4
LMNA-211ENST00000470199 LRRC4BQ9NT99 713 aa23.81■■□□□ 1.4
LMNA-211ENST00000470199 TMOD3Q9NYL9 352 aa23.81■■□□□ 1.4
LMNA-211ENST00000470199 ANP32CO43423 234 aa23.8■■□□□ 1.4
LMNA-211ENST00000470199 PLEKHF1Q96S99 279 aa23.8■■□□□ 1.4
LMNA-211ENST00000470199 PSDA5PKW4 1024 aaPredicted RBP23.79■■□□□ 1.4
LMNA-211ENST00000470199 ERVV-2B6SEH9 535 aa23.79■■□□□ 1.4
LMNA-211ENST00000470199 RNMTO43148 476 aaKnown RBP23.79■■□□□ 1.4
LMNA-211ENST00000470199 ASAP1Q9ULH1 1129 aa23.79■■□□□ 1.4
LMNA-211ENST00000470199 GAS2L2Q8NHY3 880 aa23.78■■□□□ 1.4
LMNA-211ENST00000470199 ANO8Q9HCE9 1232 aaPredicted RBP23.78■■□□□ 1.4
LMNA-211ENST00000470199 CABP4P57796 275 aa23.77■■□□□ 1.4
LMNA-211ENST00000470199 NFATC2IPQ8NCF5 419 aa23.77■■□□□ 1.4
LMNA-211ENST00000470199 ATG3Q9NT62 314 aa23.77■■□□□ 1.4
LMNA-211ENST00000470199 R3HDM1Q15032 1099 aaKnown RBP23.76■■□□□ 1.39
LMNA-211ENST00000470199 IL17REQ8NFR9 667 aa23.76■■□□□ 1.39
LMNA-211ENST00000470199 PALLDQ8WX93 1383 aa23.76■■□□□ 1.39
LMNA-211ENST00000470199 MAP3K5Q99683 1374 aa23.76■■□□□ 1.39
LMNA-211ENST00000470199 GNAT3A8MTJ3 354 aa23.75■■□□□ 1.39
LMNA-211ENST00000470199 ADAMTS8Q9UP79 889 aa23.75■■□□□ 1.39
LMNA-211ENST00000470199 LY75O60449 1722 aa23.74■■□□□ 1.39
LMNA-211ENST00000470199 SCN11AQ9UI33 1791 aa23.74■■□□□ 1.39
LMNA-211ENST00000470199 CCDC146Q8IYE0 955 aa23.74■■□□□ 1.39
LMNA-211ENST00000470199 SLC52A2Q9HAB3 445 aa23.73■■□□□ 1.39
LMNA-211ENST00000470199 ADAMTS7Q9UKP4 1686 aa23.73■■□□□ 1.39
LMNA-211ENST00000470199 WDR43Q15061 677 aaKnown RBP eCLIP23.72■■□□□ 1.39
LMNA-211ENST00000470199 CCNL1Q9UK58 526 aaPredicted RBP23.72■■□□□ 1.39
LMNA-211ENST00000470199 DCTN1Q14203 1278 aa23.71■■□□□ 1.39
LMNA-211ENST00000470199 SMARCC1Q92922 1105 aaPredicted RBP23.71■■□□□ 1.39
LMNA-211ENST00000470199 ZNF827Q17R98 1081 aa23.7■■□□□ 1.38
LMNA-211ENST00000470199 SLC27A3Q5K4L6 730 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms