RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 IP6K1Q92551 441 aa26.97■■□□□ 1.91
NCKIPSD-209ENST00000470006 SLC12A5Q9H2X9 1139 aa26.97■■□□□ 1.91
NCKIPSD-209ENST00000470006 ANKRD36BQ8N2N9 1353 aa26.97■■□□□ 1.91
NCKIPSD-209ENST00000470006 MSL1Q68DK7 614 aa26.96■■□□□ 1.91
NCKIPSD-209ENST00000470006 TERF2IPQ9NYB0 399 aa26.95■■□□□ 1.9
NCKIPSD-209ENST00000470006 DOT1LQ8TEK3 1739 aa26.95■■□□□ 1.9
NCKIPSD-209ENST00000470006 CD163L1Q9NR16 1453 aa26.94■■□□□ 1.9
NCKIPSD-209ENST00000470006 COL23A1Q86Y22 540 aaPredicted RBP26.94■■□□□ 1.9
NCKIPSD-209ENST00000470006 ZCRB1Q8TBF4 217 aaKnown RBP26.94■■□□□ 1.9
NCKIPSD-209ENST00000470006 EDC4Q6P2E9 1401 aaKnown RBP26.93■■□□□ 1.9
NCKIPSD-209ENST00000470006 LY75O60449 1722 aa26.93■■□□□ 1.9
NCKIPSD-209ENST00000470006 FAM208AQ9UK61 1670 aaKnown RBP26.92■■□□□ 1.9
NCKIPSD-209ENST00000470006 ATP10DQ9P241 1426 aa26.92■■□□□ 1.9
NCKIPSD-209ENST00000470006 GPBP1L1Q9HC44 474 aaPredicted RBP26.92■■□□□ 1.9
NCKIPSD-209ENST00000470006 AMPHP49418 695 aa26.91■■□□□ 1.9
NCKIPSD-209ENST00000470006 USP47Q96K76 1375 aa26.91■■□□□ 1.9
NCKIPSD-209ENST00000470006 ZNF526Q8TF50 670 aaPredicted RBP26.9■■□□□ 1.9
NCKIPSD-209ENST00000470006 NSD2O96028 1365 aa26.88■■□□□ 1.89
NCKIPSD-209ENST00000470006 CARD11Q9BXL7 1154 aa26.88■■□□□ 1.89
NCKIPSD-209ENST00000470006 A0A1W2PP64 1363 aa26.87■■□□□ 1.89
NCKIPSD-209ENST00000470006 COG3Q96JB2 828 aa26.86■■□□□ 1.89
NCKIPSD-209ENST00000470006 HOXC9P31274 260 aa26.85■■□□□ 1.89
NCKIPSD-209ENST00000470006 CD2APQ9Y5K6 639 aa26.85■■□□□ 1.89
NCKIPSD-209ENST00000470006 RGPD2P0DJD1 1756 aa26.84■■□□□ 1.89
NCKIPSD-209ENST00000470006 MAP3K19Q56UN5 1328 aa26.84■■□□□ 1.89
NCKIPSD-209ENST00000470006 FBLN1P23142 703 aa26.83■■□□□ 1.89
NCKIPSD-209ENST00000470006 HSPA6P17066 643 aa26.82■■□□□ 1.88
NCKIPSD-209ENST00000470006 MEGF6O75095 1541 aa26.81■■□□□ 1.88
NCKIPSD-209ENST00000470006 FLAD1Q8NFF5 587 aa26.81■■□□□ 1.88
NCKIPSD-209ENST00000470006 HMGB2P26583 209 aaKnown RBP26.8■■□□□ 1.88
NCKIPSD-209ENST00000470006 WWC3Q9ULE0 1092 aa26.8■■□□□ 1.88
NCKIPSD-209ENST00000470006 USHBP1Q8N6Y0 703 aa26.79■■□□□ 1.88
NCKIPSD-209ENST00000470006 RAPGEF4Q8WZA2 1011 aa26.79■■□□□ 1.88
NCKIPSD-209ENST00000470006 C5P01031 1676 aa26.78■■□□□ 1.88
NCKIPSD-209ENST00000470006 NBPF6Q5VWK0 638 aa26.76■■□□□ 1.87
NCKIPSD-209ENST00000470006 MPRIPQ6WCQ1 1025 aa26.76■■□□□ 1.87
NCKIPSD-209ENST00000470006 NBPF4Q96M43 638 aa26.76■■□□□ 1.87
NCKIPSD-209ENST00000470006 CGNL1Q0VF96 1302 aa26.75■■□□□ 1.87
NCKIPSD-209ENST00000470006 TATP17735 454 aaPredicted RBP26.75■■□□□ 1.87
NCKIPSD-209ENST00000470006 AK7Q96M32 723 aa26.75■■□□□ 1.87
NCKIPSD-209ENST00000470006 RRS1Q15050 365 aaKnown RBP26.74■■□□□ 1.87
NCKIPSD-209ENST00000470006 PALLDQ8WX93 1383 aa26.73■■□□□ 1.87
NCKIPSD-209ENST00000470006 PHF14O94880 888 aa26.73■■□□□ 1.87
NCKIPSD-209ENST00000470006 PUS7Q96PZ0 661 aaKnown RBP26.73■■□□□ 1.87
NCKIPSD-209ENST00000470006 SMG6Q86US8 1419 aaKnown RBP26.73■■□□□ 1.87
NCKIPSD-209ENST00000470006 IGSF1Q8N6C5 1336 aa26.72■■□□□ 1.87
NCKIPSD-209ENST00000470006 ADCY9O60503 1353 aa26.71■■□□□ 1.87
NCKIPSD-209ENST00000470006 TAF1LQ8IZX4 1826 aa26.71■■□□□ 1.87
NCKIPSD-209ENST00000470006 PCDH11XQ9BZA7 1347 aa26.7■■□□□ 1.87
NCKIPSD-209ENST00000470006 PCDH11YQ9BZA8 1340 aa26.7■■□□□ 1.87
NCKIPSD-209ENST00000470006 RTL1A6NKG5 1358 aa26.69■■□□□ 1.86
NCKIPSD-209ENST00000470006 SMARCC1Q92922 1105 aaPredicted RBP26.68■■□□□ 1.86
NCKIPSD-209ENST00000470006 SMIM5Q71RC9 77 aa26.67■■□□□ 1.86
NCKIPSD-209ENST00000470006 C4BP0C0L5 1744 aa26.66■■□□□ 1.86
NCKIPSD-209ENST00000470006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.65■■□□□ 1.86
NCKIPSD-209ENST00000470006 GGNBP2Q9H3C7 697 aa26.65■■□□□ 1.86
NCKIPSD-209ENST00000470006 AMIGO3Q86WK7 504 aa26.63■■□□□ 1.85
NCKIPSD-209ENST00000470006 KIF3CO14782 793 aa26.62■■□□□ 1.85
NCKIPSD-209ENST00000470006 HSP90AB2PQ58FF8 381 aa26.62■■□□□ 1.85
NCKIPSD-209ENST00000470006 NSD3Q9BZ95 1437 aa26.62■■□□□ 1.85
NCKIPSD-209ENST00000470006 ITGB4P16144 1822 aa26.61■■□□□ 1.85
NCKIPSD-209ENST00000470006 ST20-MTHFSA0A0A6YYL1 179 aa26.6■■□□□ 1.85
NCKIPSD-209ENST00000470006 CYP27B1O15528 508 aa26.6■■□□□ 1.85
NCKIPSD-209ENST00000470006 UBR3Q6ZT12 1888 aa26.59■■□□□ 1.85
NCKIPSD-209ENST00000470006 FYB1O15117 783 aa26.59■■□□□ 1.85
NCKIPSD-209ENST00000470006 APLP1P51693 650 aa26.59■■□□□ 1.85
NCKIPSD-209ENST00000470006 SSFA2P28290 1259 aa26.58■■□□□ 1.85
NCKIPSD-209ENST00000470006 PIGBQ92521 554 aa26.58■■□□□ 1.85
NCKIPSD-209ENST00000470006 TONSLQ96HA7 1378 aa26.58■■□□□ 1.84
NCKIPSD-209ENST00000470006 TOGARAM1Q9Y4F4 1720 aa26.57■■□□□ 1.84
NCKIPSD-209ENST00000470006 SLC24A1O60721 1099 aa26.57■■□□□ 1.84
NCKIPSD-209ENST00000470006 TESK2Q96S53 571 aa26.57■■□□□ 1.84
NCKIPSD-209ENST00000470006 INSRP06213 1382 aa26.57■■□□□ 1.84
NCKIPSD-209ENST00000470006 LOC102724428A0A0B4J2F2 783 aa26.55■■□□□ 1.84
NCKIPSD-209ENST00000470006 GNPATO15228 680 aa26.55■■□□□ 1.84
NCKIPSD-209ENST00000470006 SIK1P57059 783 aa26.55■■□□□ 1.84
NCKIPSD-209ENST00000470006 LINC00116Q8NCU8 138 aa26.55■■□□□ 1.84
NCKIPSD-209ENST00000470006 FLT4P35916 1363 aa26.54■■□□□ 1.84
NCKIPSD-209ENST00000470006 MMP10P09238 476 aa26.53■■□□□ 1.84
NCKIPSD-209ENST00000470006 BCS1LQ9Y276 419 aa26.53■■□□□ 1.84
NCKIPSD-209ENST00000470006 TOMM70O94826 608 aa26.52■■□□□ 1.84
NCKIPSD-209ENST00000470006 TMOD3Q9NYL9 352 aa26.52■■□□□ 1.84
NCKIPSD-209ENST00000470006 SPG7Q9UQ90 795 aa26.52■■□□□ 1.84
NCKIPSD-209ENST00000470006 PPM1GO15355 546 aaPredicted RBP26.51■■□□□ 1.83
NCKIPSD-209ENST00000470006 ATP6V1AP38606 617 aa26.51■■□□□ 1.83
NCKIPSD-209ENST00000470006 ARHGAP27Q6ZUM4 889 aa26.51■■□□□ 1.83
NCKIPSD-209ENST00000470006 A0A0G2JLW4 131 aa26.48■■□□□ 1.83
NCKIPSD-209ENST00000470006 ASAP1Q9ULH1 1129 aa26.48■■□□□ 1.83
NCKIPSD-209ENST00000470006 TMF1P82094 1093 aa26.47■■□□□ 1.83
NCKIPSD-209ENST00000470006 ITPK1Q13572 414 aa26.47■■□□□ 1.83
NCKIPSD-209ENST00000470006 NKX1-1Q15270 411 aaPredicted RBP26.47■■□□□ 1.83
NCKIPSD-209ENST00000470006 N4BP2Q86UW6 1770 aaPredicted RBP26.47■■□□□ 1.83
NCKIPSD-209ENST00000470006 PKD1L3Q7Z443 1732 aa26.47■■□□□ 1.83
NCKIPSD-209ENST00000470006 KIF24Q5T7B8 1368 aa26.46■■□□□ 1.83
NCKIPSD-209ENST00000470006 MAP2P11137 1827 aaKnown RBP26.46■■□□□ 1.83
NCKIPSD-209ENST00000470006 KIF20BQ96Q89 1820 aa26.46■■□□□ 1.83
NCKIPSD-209ENST00000470006 TGFB2P61812 414 aa26.46■■□□□ 1.83
NCKIPSD-209ENST00000470006 DNAJC5GQ8N7S2 189 aa26.46■■□□□ 1.83
NCKIPSD-209ENST00000470006 EMILIN1Q9Y6C2 1016 aa26.46■■□□□ 1.83
NCKIPSD-209ENST00000470006 PXDNLA1KZ92 1463 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms