RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 TAF7LQ5H9L4 462 aa6.33□□□□□ -1.4
SF3B1-207ENST00000468925 GPAT2Q6NUI2 795 aa6.33□□□□□ -1.4
SF3B1-207ENST00000468925 HELBQ8NG08 1087 aaPredicted RBP6.33□□□□□ -1.4
SF3B1-207ENST00000468925 TRIM52Q96A61 297 aa6.33□□□□□ -1.4
SF3B1-207ENST00000468925 ITPKCQ96DU7 683 aa6.33□□□□□ -1.4
SF3B1-207ENST00000468925 CLIP1P30622 1438 aa6.33□□□□□ -1.4
SF3B1-207ENST00000468925 RNF123Q5XPI4 1314 aa6.32□□□□□ -1.4
SF3B1-207ENST00000468925 ZIC2O95409 532 aaPredicted RBP6.32□□□□□ -1.4
SF3B1-207ENST00000468925 FSHRP23945 695 aa6.32□□□□□ -1.4
SF3B1-207ENST00000468925 TERF1P54274 439 aa6.32□□□□□ -1.4
SF3B1-207ENST00000468925 AAMPQ13685 434 aa6.32□□□□□ -1.4
SF3B1-207ENST00000468925 MRPL14Q6P1L8 145 aaKnown RBP6.32□□□□□ -1.4
SF3B1-207ENST00000468925 PNNQ9H307 717 aaKnown RBP6.32□□□□□ -1.4
SF3B1-207ENST00000468925 CTDSPL2Q05D32 466 aa6.31□□□□□ -1.4
SF3B1-207ENST00000468925 SCARF1Q14162 830 aa6.31□□□□□ -1.4
SF3B1-207ENST00000468925 BPHLQ86WA6 291 aaPredicted RBP6.31□□□□□ -1.4
SF3B1-207ENST00000468925 SMG6Q86US8 1419 aaKnown RBP6.31□□□□□ -1.4
SF3B1-207ENST00000468925 RNF225M0QZC1 329 aaPredicted RBP6.3□□□□□ -1.4
SF3B1-207ENST00000468925 RAD21O60216 631 aa6.3□□□□□ -1.4
SF3B1-207ENST00000468925 FBXO31Q5XUX0 539 aaPredicted RBP6.3□□□□□ -1.4
SF3B1-207ENST00000468925 PROCA1Q8NCQ7 364 aaPredicted RBP6.3□□□□□ -1.4
SF3B1-207ENST00000468925 LRRN4Q8WUT4 740 aa6.3□□□□□ -1.4
SF3B1-207ENST00000468925 DNMT3AQ9Y6K1 912 aaPredicted RBP6.3□□□□□ -1.4
SF3B1-207ENST00000468925 BAZ1AQ9NRL2 1556 aaPredicted RBP6.3□□□□□ -1.4
SF3B1-207ENST00000468925 RBM10P98175 930 aaKnown RBP6.29□□□□□ -1.4
SF3B1-207ENST00000468925 LCE3BQ5TA77 95 aa6.29□□□□□ -1.4
SF3B1-207ENST00000468925 NBPF14Q5TI25 921 aa6.29□□□□□ -1.4
SF3B1-207ENST00000468925 VASH1Q7L8A9 365 aaPredicted RBP6.29□□□□□ -1.4
SF3B1-207ENST00000468925 BRPF3Q9ULD4 1205 aa6.29□□□□□ -1.4
SF3B1-207ENST00000468925 ADAM23O75077 832 aa6.28□□□□□ -1.4
SF3B1-207ENST00000468925 BMP2P12643 396 aa6.28□□□□□ -1.4
SF3B1-207ENST00000468925 CDK11BP21127 795 aaKnown RBP6.28□□□□□ -1.4
SF3B1-207ENST00000468925 GRM5P41594 1212 aa6.28□□□□□ -1.4
SF3B1-207ENST00000468925 NFKBIBQ15653 356 aa6.28□□□□□ -1.4
SF3B1-207ENST00000468925 TAF3Q5VWG9 929 aa6.28□□□□□ -1.4
SF3B1-207ENST00000468925 CCDC82Q8N4S0 544 aa6.28□□□□□ -1.4
SF3B1-207ENST00000468925 RGS22Q8NE09 1264 aa6.28□□□□□ -1.4
SF3B1-207ENST00000468925 CDK15Q96Q40 435 aa6.28□□□□□ -1.4
SF3B1-207ENST00000468925 KLF16Q9BXK1 252 aaPredicted RBP6.28□□□□□ -1.4
SF3B1-207ENST00000468925 FAM117AQ9C073 453 aa6.28□□□□□ -1.4
SF3B1-207ENST00000468925 KDM4CQ9H3R0 1056 aa6.28□□□□□ -1.4
SF3B1-207ENST00000468925 MAP3K1Q13233 1512 aa6.28□□□□□ -1.4
SF3B1-207ENST00000468925 PEG3Q9GZU2 1588 aa6.27□□□□□ -1.41
SF3B1-207ENST00000468925 FHAD1B1AJZ9 1412 aa6.27□□□□□ -1.41
SF3B1-207ENST00000468925 MAN1A2O60476 641 aa6.27□□□□□ -1.41
SF3B1-207ENST00000468925 TNNT2P45379 298 aaPredicted RBP6.27□□□□□ -1.41
SF3B1-207ENST00000468925 B4GALNT3Q6L9W6 998 aa6.27□□□□□ -1.41
SF3B1-207ENST00000468925 MPNDQ8N594 471 aa6.27□□□□□ -1.41
SF3B1-207ENST00000468925 ARMC2Q8NEN0 867 aa6.27□□□□□ -1.41
SF3B1-207ENST00000468925 FRAT1Q92837 279 aaPredicted RBP6.27□□□□□ -1.41
SF3B1-207ENST00000468925 BACH2Q9BYV9 841 aa6.27□□□□□ -1.41
SF3B1-207ENST00000468925 CCNB3Q8WWL7 1395 aa6.27□□□□□ -1.41
SF3B1-207ENST00000468925 AP1G2O75843 785 aa6.26□□□□□ -1.41
SF3B1-207ENST00000468925 HMGB1P09429 215 aaKnown RBP6.26□□□□□ -1.41
SF3B1-207ENST00000468925 NR5A1Q13285 461 aa6.26□□□□□ -1.41
SF3B1-207ENST00000468925 NR6A1Q15406 480 aa6.26□□□□□ -1.41
SF3B1-207ENST00000468925 TUSC1Q2TAM9 212 aa6.26□□□□□ -1.41
SF3B1-207ENST00000468925 SH3BP5LQ7L8J4 393 aa6.26□□□□□ -1.41
SF3B1-207ENST00000468925 SMAP1Q8IYB5 467 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-207ENST00000468925 NAP1L5Q96NT1 182 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-207ENST00000468925 SETD5Q9C0A6 1442 aa6.25□□□□□ -1.41
SF3B1-207ENST00000468925 HSP90B1P14625 803 aaKnown RBP6.25□□□□□ -1.41
SF3B1-207ENST00000468925 RAB15P59190 212 aa6.25□□□□□ -1.41
SF3B1-207ENST00000468925 ERFEQ4G0M1 354 aa6.25□□□□□ -1.41
SF3B1-207ENST00000468925 UTP14CQ5TAP6 766 aaKnown RBP6.25□□□□□ -1.41
SF3B1-207ENST00000468925 SH3RF1Q7Z6J0 888 aa6.25□□□□□ -1.41
SF3B1-207ENST00000468925 LINC00528Q8N1L1 170 aa6.25□□□□□ -1.41
SF3B1-207ENST00000468925 ANP32BQ92688 251 aaKnown RBP6.25□□□□□ -1.41
SF3B1-207ENST00000468925 TRIM44Q96DX7 344 aaPredicted RBP6.25□□□□□ -1.41
SF3B1-207ENST00000468925 KRTAP4-12Q9BQ66 201 aa6.25□□□□□ -1.41
SF3B1-207ENST00000468925 TRAIPQ9BWF2 469 aa6.25□□□□□ -1.41
SF3B1-207ENST00000468925 C1QTNF2Q9BXJ5 285 aa6.25□□□□□ -1.41
SF3B1-207ENST00000468925 KRTAP9-9Q9BYP9 154 aa6.25□□□□□ -1.41
SF3B1-207ENST00000468925 KRTAP9-4Q9BYQ2 154 aa6.25□□□□□ -1.41
SF3B1-207ENST00000468925 ADAMTS8Q9UP79 889 aa6.25□□□□□ -1.41
SF3B1-207ENST00000468925 NUDCQ9Y266 331 aa6.25□□□□□ -1.41
SF3B1-207ENST00000468925 MAPKBP1O60336 1514 aa6.25□□□□□ -1.41
SF3B1-207ENST00000468925 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.24□□□□□ -1.41
SF3B1-207ENST00000468925 UPP2O95045 317 aa6.24□□□□□ -1.41
SF3B1-207ENST00000468925 CBLBQ13191 982 aa6.24□□□□□ -1.41
SF3B1-207ENST00000468925 CNGB1Q14028 1251 aaPredicted RBP6.24□□□□□ -1.41
SF3B1-207ENST00000468925 EPS8L1Q8TE68 723 aa6.24□□□□□ -1.41
SF3B1-207ENST00000468925 ARHGAP9Q9BRR9 750 aa6.24□□□□□ -1.41
SF3B1-207ENST00000468925 MTMR7Q9Y216 660 aa6.24□□□□□ -1.41
SF3B1-207ENST00000468925 WDR97A6NE52 1622 aa6.24□□□□□ -1.41
SF3B1-207ENST00000468925 CCDC88BA6NC98 1476 aa6.23□□□□□ -1.41
SF3B1-207ENST00000468925 FIGNL2A6NMB9 653 aa6.23□□□□□ -1.41
SF3B1-207ENST00000468925 PTMSP20962 102 aa6.23□□□□□ -1.41
SF3B1-207ENST00000468925 FOXK2Q01167 660 aa6.23□□□□□ -1.41
SF3B1-207ENST00000468925 SKIV2LQ15477 1246 aaKnown RBP6.23□□□□□ -1.41
SF3B1-207ENST00000468925 CCDC116Q8IYX3 515 aa6.23□□□□□ -1.41
SF3B1-207ENST00000468925 MEIOBQ8N635 442 aa6.23□□□□□ -1.41
SF3B1-207ENST00000468925 CCDC144AA2RUR9 1427 aa6.23□□□□□ -1.41
SF3B1-207ENST00000468925 ERICH3Q5RHP9 1530 aa6.22□□□□□ -1.41
SF3B1-207ENST00000468925 SH3D19Q5HYK7 790 aa6.22□□□□□ -1.41
SF3B1-207ENST00000468925 PPP1R26Q5T8A7 1209 aaPredicted RBP6.22□□□□□ -1.41
SF3B1-207ENST00000468925 ZBTB33Q86T24 672 aa6.22□□□□□ -1.41
SF3B1-207ENST00000468925 SLC10A4Q96EP9 437 aa6.22□□□□□ -1.41
SF3B1-207ENST00000468925 FKBPLQ9UIM3 349 aa6.22□□□□□ -1.41
SF3B1-207ENST00000468925 DNMT3LQ9UJW3 386 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms