RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 SYTL4Q96C24 671 aaPredicted RBP24.14■■□□□ 1.45
TRIM56-203ENST00000467847 ZCRB1Q8TBF4 217 aaKnown RBP24.13■■□□□ 1.45
TRIM56-203ENST00000467847 MEGF6O75095 1541 aa24.13■■□□□ 1.45
TRIM56-203ENST00000467847 CDCA8Q53HL2 280 aa24.12■■□□□ 1.45
TRIM56-203ENST00000467847 SLC27A3Q5K4L6 730 aa24.12■■□□□ 1.45
TRIM56-203ENST00000467847 SGIP1Q9BQI5 828 aa24.12■■□□□ 1.45
TRIM56-203ENST00000467847 SMG6Q86US8 1419 aaKnown RBP24.11■■□□□ 1.45
TRIM56-203ENST00000467847 PRIM1P49642 420 aaKnown RBP24.11■■□□□ 1.45
TRIM56-203ENST00000467847 QSER1Q2KHR3 1735 aa24.1■■□□□ 1.45
TRIM56-203ENST00000467847 NBPF6Q5VWK0 638 aa24.09■■□□□ 1.45
TRIM56-203ENST00000467847 AKT1S1Q96B36 256 aa24.09■■□□□ 1.45
TRIM56-203ENST00000467847 NBPF4Q96M43 638 aa24.09■■□□□ 1.45
TRIM56-203ENST00000467847 UTRNP46939 3433 aa24.09■■□□□ 1.45
TRIM56-203ENST00000467847 USHBP1Q8N6Y0 703 aa24.08■■□□□ 1.45
TRIM56-203ENST00000467847 ARXQ96QS3 562 aa24.08■■□□□ 1.45
TRIM56-203ENST00000467847 LY75O60449 1722 aa24.07■■□□□ 1.44
TRIM56-203ENST00000467847 CGNL1Q0VF96 1302 aa24.07■■□□□ 1.44
TRIM56-203ENST00000467847 NSD2O96028 1365 aa24.06■■□□□ 1.44
TRIM56-203ENST00000467847 RAPGEF4Q8WZA2 1011 aa24.06■■□□□ 1.44
TRIM56-203ENST00000467847 TUBGCP6Q96RT7 1819 aa24.05■■□□□ 1.44
TRIM56-203ENST00000467847 KCNQ4P56696 695 aa24.05■■□□□ 1.44
TRIM56-203ENST00000467847 GPR162Q16538 588 aa24.05■■□□□ 1.44
TRIM56-203ENST00000467847 INSRP06213 1382 aa24.04■■□□□ 1.44
TRIM56-203ENST00000467847 FLT4P35916 1363 aa24.04■■□□□ 1.44
TRIM56-203ENST00000467847 HSP90AB2PQ58FF8 381 aa24.04■■□□□ 1.44
TRIM56-203ENST00000467847 TFCP2L1Q9NZI6 479 aa24.03■■□□□ 1.44
TRIM56-203ENST00000467847 KIF24Q5T7B8 1368 aa24.03■■□□□ 1.44
TRIM56-203ENST00000467847 TATP17735 454 aaPredicted RBP24.02■■□□□ 1.44
TRIM56-203ENST00000467847 SLC16A10Q8TF71 515 aa24.02■■□□□ 1.44
TRIM56-203ENST00000467847 CARD14Q9BXL6 1004 aa24.02■■□□□ 1.44
TRIM56-203ENST00000467847 PNPLA7Q6ZV29 1317 aa24.02■■□□□ 1.44
TRIM56-203ENST00000467847 NSD3Q9BZ95 1437 aa24.01■■□□□ 1.43
TRIM56-203ENST00000467847 GIGYF1O75420 1035 aaPredicted RBP24.01■■□□□ 1.43
TRIM56-203ENST00000467847 KLHL34Q8N239 644 aa24.01■■□□□ 1.43
TRIM56-203ENST00000467847 CCNL1Q9UK58 526 aaPredicted RBP24.01■■□□□ 1.43
TRIM56-203ENST00000467847 MAP3K5Q99683 1374 aa24.01■■□□□ 1.43
TRIM56-203ENST00000467847 IFFO2Q5TF58 517 aa24■■□□□ 1.43
TRIM56-203ENST00000467847 CHD4Q14839 1912 aa24■■□□□ 1.43
TRIM56-203ENST00000467847 COL24A1Q17RW2 1714 aa23.99■■□□□ 1.43
TRIM56-203ENST00000467847 POLD1P28340 1107 aa23.99■■□□□ 1.43
TRIM56-203ENST00000467847 PELP1Q8IZL8 1130 aaKnown RBP23.99■■□□□ 1.43
TRIM56-203ENST00000467847 PCDH11XQ9BZA7 1347 aa23.99■■□□□ 1.43
TRIM56-203ENST00000467847 PCDH11YQ9BZA8 1340 aa23.99■■□□□ 1.43
TRIM56-203ENST00000467847 TIMELESSQ9UNS1 1208 aa23.98■■□□□ 1.43
TRIM56-203ENST00000467847 EMILIN1Q9Y6C2 1016 aa23.97■■□□□ 1.43
TRIM56-203ENST00000467847 ANKRD26Q9UPS8 1709 aa23.95■■□□□ 1.42
TRIM56-203ENST00000467847 PPM1GO15355 546 aaPredicted RBP23.94■■□□□ 1.42
TRIM56-203ENST00000467847 C5P01031 1676 aa23.94■■□□□ 1.42
TRIM56-203ENST00000467847 MAP2P11137 1827 aaKnown RBP23.94■■□□□ 1.42
TRIM56-203ENST00000467847 PKD1L3Q7Z443 1732 aa23.93■■□□□ 1.42
TRIM56-203ENST00000467847 ITGB4P16144 1822 aa23.92■■□□□ 1.42
TRIM56-203ENST00000467847 MSH5O43196 834 aa23.92■■□□□ 1.42
TRIM56-203ENST00000467847 TOGARAM1Q9Y4F4 1720 aa23.91■■□□□ 1.42
TRIM56-203ENST00000467847 CYP27B1O15528 508 aa23.91■■□□□ 1.42
TRIM56-203ENST00000467847 MPRIPQ6WCQ1 1025 aa23.91■■□□□ 1.42
TRIM56-203ENST00000467847 PCGF6Q9BYE7 350 aa23.91■■□□□ 1.42
TRIM56-203ENST00000467847 PALLDQ8WX93 1383 aa23.91■■□□□ 1.42
TRIM56-203ENST00000467847 GOLGB1Q14789 3259 aaKnown RBP23.9■■□□□ 1.42
TRIM56-203ENST00000467847 CLSPNQ9HAW4 1339 aa23.9■■□□□ 1.42
TRIM56-203ENST00000467847 TAF1LQ8IZX4 1826 aa23.9■■□□□ 1.42
TRIM56-203ENST00000467847 COL23A1Q86Y22 540 aaPredicted RBP23.89■■□□□ 1.41
TRIM56-203ENST00000467847 POLR3GLQ9BT43 218 aa23.89■■□□□ 1.41
TRIM56-203ENST00000467847 NCAPD2Q15021 1401 aa23.89■■□□□ 1.41
TRIM56-203ENST00000467847 WASHC2AQ641Q2 1341 aa23.87■■□□□ 1.41
TRIM56-203ENST00000467847 HMGB2P26583 209 aaKnown RBP23.87■■□□□ 1.41
TRIM56-203ENST00000467847 SPG7Q9UQ90 795 aa23.86■■□□□ 1.41
TRIM56-203ENST00000467847 MSL1Q68DK7 614 aa23.84■■□□□ 1.41
TRIM56-203ENST00000467847 NLGN2Q8NFZ4 835 aa23.84■■□□□ 1.41
TRIM56-203ENST00000467847 SMARCC1Q92922 1105 aaPredicted RBP23.84■■□□□ 1.41
TRIM56-203ENST00000467847 EYA1Q99502 592 aa23.84■■□□□ 1.41
TRIM56-203ENST00000467847 POLKQ9UBT6 870 aa23.84■■□□□ 1.41
TRIM56-203ENST00000467847 C4BP0C0L5 1744 aa23.83■■□□□ 1.41
TRIM56-203ENST00000467847 CEP350Q5VT06 3117 aa23.83■■□□□ 1.4
TRIM56-203ENST00000467847 NKX1-1Q15270 411 aaPredicted RBP23.82■■□□□ 1.4
TRIM56-203ENST00000467847 FLAD1Q8NFF5 587 aa23.82■■□□□ 1.4
TRIM56-203ENST00000467847 PIGBQ92521 554 aa23.82■■□□□ 1.4
TRIM56-203ENST00000467847 TNNT2P45379 298 aaPredicted RBP23.81■■□□□ 1.4
TRIM56-203ENST00000467847 GRIN3BO60391 1043 aa23.8■■□□□ 1.4
TRIM56-203ENST00000467847 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.8■■□□□ 1.4
TRIM56-203ENST00000467847 AK7Q96M32 723 aa23.79■■□□□ 1.4
TRIM56-203ENST00000467847 EIF4G2P78344 907 aaKnown RBP eCLIP23.78■■□□□ 1.4
TRIM56-203ENST00000467847 UBR3Q6ZT12 1888 aa23.78■■□□□ 1.4
TRIM56-203ENST00000467847 EIF4A2Q14240 407 aaKnown RBP23.77■■□□□ 1.4
TRIM56-203ENST00000467847 TMOD3Q9NYL9 352 aa23.77■■□□□ 1.4
TRIM56-203ENST00000467847 HSPA5P11021 654 aaKnown RBP23.76■■□□□ 1.39
TRIM56-203ENST00000467847 PHKG2P15735 406 aa23.76■■□□□ 1.39
TRIM56-203ENST00000467847 IFNL2Q8IZJ0 200 aa23.76■■□□□ 1.39
TRIM56-203ENST00000467847 PHF14O94880 888 aa23.75■■□□□ 1.39
TRIM56-203ENST00000467847 LOC102724428A0A0B4J2F2 783 aa23.74■■□□□ 1.39
TRIM56-203ENST00000467847 SIK1P57059 783 aa23.74■■□□□ 1.39
TRIM56-203ENST00000467847 AMIGO3Q86WK7 504 aa23.74■■□□□ 1.39
TRIM56-203ENST00000467847 PANK3Q9H999 370 aa23.74■■□□□ 1.39
TRIM56-203ENST00000467847 YBX3P16989 372 aaKnown RBP eCLIP23.73■■□□□ 1.39
TRIM56-203ENST00000467847 ASAP1Q9ULH1 1129 aa23.73■■□□□ 1.39
TRIM56-203ENST00000467847 LINC00116Q8NCU8 138 aa23.72■■□□□ 1.39
TRIM56-203ENST00000467847 CD2APQ9Y5K6 639 aa23.72■■□□□ 1.39
TRIM56-203ENST00000467847 PLEKHG2Q9H7P9 1386 aa23.72■■□□□ 1.39
TRIM56-203ENST00000467847 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.71■■□□□ 1.39
TRIM56-203ENST00000467847 SMIM5Q71RC9 77 aa23.71■■□□□ 1.39
TRIM56-203ENST00000467847 IGSF1Q8N6C5 1336 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms